RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 WTAPQ15007 396 aa15.01□□□□□ -0.01
NFKB1-202ENST00000394820 FMR1NBQ8N0W7 255 aaPredicted RBP15.01□□□□□ -0.01
NFKB1-202ENST00000394820 ACRBPQ8NEB7 543 aa15.01□□□□□ -0.01
NFKB1-202ENST00000394820 LLPHQ9BRT6 129 aaKnown RBP15.01□□□□□ -0.01
NFKB1-202ENST00000394820 RIPOR2Q9Y4F9 1068 aa15.01□□□□□ -0.01
NFKB1-202ENST00000394820 AKR1B15C9JRZ8 316 aaPredicted RBP15.01□□□□□ -0.01
NFKB1-202ENST00000394820 CYB5R4Q7L1T6 521 aa15.01□□□□□ -0.01
NFKB1-202ENST00000394820 SDR42E1Q8WUS8 393 aa15.01□□□□□ -0.01
NFKB1-202ENST00000394820 ANGEL1Q9UNK9 670 aaKnown RBP15.01□□□□□ -0.01
NFKB1-202ENST00000394820 CTNND2Q9UQB3 1225 aa15.01□□□□□ -0.01
NFKB1-202ENST00000394820 CTAGE9A4FU28 777 aa15□□□□□ -0.01
NFKB1-202ENST00000394820 KCNQ2O43526 872 aa15□□□□□ -0.01
NFKB1-202ENST00000394820 ZEB2O60315 1214 aa15□□□□□ -0.01
NFKB1-202ENST00000394820 ARID5AQ03989 594 aa15□□□□□ -0.01
NFKB1-202ENST00000394820 ZNHIT6Q9NWK9 470 aaKnown RBP15□□□□□ -0.01
NFKB1-202ENST00000394820 MORC2Q9Y6X9 1032 aaPredicted RBP15□□□□□ -0.01
NFKB1-202ENST00000394820 SOS2Q07890 1332 aaPredicted RBP15□□□□□ -0.01
NFKB1-202ENST00000394820 FDPSP14324 419 aaKnown RBP15□□□□□ -0.01
NFKB1-202ENST00000394820 CYP7A1P22680 504 aa15□□□□□ -0.01
NFKB1-202ENST00000394820 GYG1P46976 350 aa15□□□□□ -0.01
NFKB1-202ENST00000394820 NLRP5P59047 1200 aa15□□□□□ -0.01
NFKB1-202ENST00000394820 SPATA5Q8NB90 893 aa15□□□□□ -0.01
NFKB1-202ENST00000394820 ARHGAP6O43182 974 aa14.99□□□□□ -0.01
NFKB1-202ENST00000394820 NKX2-3Q8TAU0 364 aa14.99□□□□□ -0.01
NFKB1-202ENST00000394820 RASSF4Q9H2L5 321 aa14.99□□□□□ -0.01
NFKB1-202ENST00000394820 MYO1BO43795 1136 aa14.99□□□□□ -0.01
NFKB1-202ENST00000394820 CRKLP46109 303 aaKnown RBP14.99□□□□□ -0.01
NFKB1-202ENST00000394820 UBXN1Q04323 297 aa14.99□□□□□ -0.01
NFKB1-202ENST00000394820 POSTNQ15063 836 aa14.99□□□□□ -0.01
NFKB1-202ENST00000394820 BRAPQ7Z569 592 aa14.99□□□□□ -0.01
NFKB1-202ENST00000394820 ZNF274Q96GC6 653 aaPredicted RBP14.99□□□□□ -0.01
NFKB1-202ENST00000394820 BCCIPQ9P287 314 aaKnown RBP eCLIP14.99□□□□□ -0.01
NFKB1-202ENST00000394820 ADD2P35612 726 aa14.99□□□□□ -0.01
NFKB1-202ENST00000394820 ANTXR2P58335 489 aa14.99□□□□□ -0.01
NFKB1-202ENST00000394820 RASGRF1Q13972 1273 aa14.99□□□□□ -0.01
NFKB1-202ENST00000394820 PUM3Q15397 648 aaKnown RBP14.99□□□□□ -0.01
NFKB1-202ENST00000394820 SPECC1LQ69YQ0 1117 aa14.99□□□□□ -0.01
NFKB1-202ENST00000394820 RTEL1Q9NZ71 1219 aa14.99□□□□□ -0.01
NFKB1-202ENST00000394820 FAN1Q9Y2M0 1017 aa14.99□□□□□ -0.01
NFKB1-202ENST00000394820 V9GY48 417 aaPredicted RBP14.99□□□□□ -0.01
NFKB1-202ENST00000394820 TRIM21P19474 475 aaKnown RBP14.98□□□□□ -0.01
NFKB1-202ENST00000394820 TTF1Q15361 905 aaPredicted RBP14.98□□□□□ -0.01
NFKB1-202ENST00000394820 SMARCC2Q8TAQ2 1214 aa14.98□□□□□ -0.01
NFKB1-202ENST00000394820 IMPACTQ9P2X3 320 aa14.98□□□□□ -0.01
NFKB1-202ENST00000394820 BAZ2BQ9UIF8 2168 aaKnown RBP14.98□□□□□ -0.01
NFKB1-202ENST00000394820 CPDO75976 1380 aa14.98□□□□□ -0.01
NFKB1-202ENST00000394820 IDEP14735 1019 aa14.98□□□□□ -0.01
NFKB1-202ENST00000394820 ATP2B2Q01814 1243 aa14.98□□□□□ -0.01
NFKB1-202ENST00000394820 LONRF2Q1L5Z9 754 aa14.98□□□□□ -0.01
NFKB1-202ENST00000394820 RNF187Q5TA31 235 aaPredicted RBP14.98□□□□□ -0.01
NFKB1-202ENST00000394820 TEX33O43247 280 aa14.98□□□□□ -0.01
NFKB1-202ENST00000394820 KRT9P35527 623 aa14.98□□□□□ -0.01
NFKB1-202ENST00000394820 KIF23Q02241 960 aaPredicted RBP14.98□□□□□ -0.01
NFKB1-202ENST00000394820 NKX1-1Q15270 411 aaPredicted RBP14.98□□□□□ -0.01
NFKB1-202ENST00000394820 USP49Q70CQ1 688 aa14.98□□□□□ -0.01
NFKB1-202ENST00000394820 COL5A2P05997 1499 aaPredicted RBP14.98□□□□□ -0.01
NFKB1-202ENST00000394820 UBN2Q6ZU65 1347 aa14.98□□□□□ -0.01
NFKB1-202ENST00000394820 CYP2D7A0A087X1C5 515 aa14.97□□□□□ -0.01
NFKB1-202ENST00000394820 CASP14P31944 242 aa14.97□□□□□ -0.01
NFKB1-202ENST00000394820 CCDC148Q8NFR7 591 aa14.97□□□□□ -0.01
NFKB1-202ENST00000394820 LPIN2Q92539 896 aa14.97□□□□□ -0.01
NFKB1-202ENST00000394820 TFR2Q9UP52 801 aa14.97□□□□□ -0.01
NFKB1-202ENST00000394820 PALLDQ8WX93 1383 aa14.97□□□□□ -0.01
NFKB1-202ENST00000394820 NCAPH2Q6IBW4 605 aa14.97□□□□□ -0.01
NFKB1-202ENST00000394820 SLC35F6Q8N357 371 aa14.97□□□□□ -0.01
NFKB1-202ENST00000394820 ANKRD13CQ8N6S4 541 aa14.97□□□□□ -0.01
NFKB1-202ENST00000394820 TRIM47Q96LD4 638 aa14.97□□□□□ -0.01
NFKB1-202ENST00000394820 CCDC87Q9NVE4 849 aa14.97□□□□□ -0.01
NFKB1-202ENST00000394820 PRR29P0C7W0 189 aa14.97□□□□□ -0.01
NFKB1-202ENST00000394820 CMA1P23946 247 aa14.97□□□□□ -0.01
NFKB1-202ENST00000394820 GRIN1Q05586 938 aa14.97□□□□□ -0.01
NFKB1-202ENST00000394820 E2F4Q16254 413 aa14.97□□□□□ -0.01
NFKB1-202ENST00000394820 FAM98CQ17RN3 349 aaKnown RBP14.97□□□□□ -0.01
NFKB1-202ENST00000394820 GSPT2Q8IYD1 628 aaKnown RBP14.97□□□□□ -0.01
NFKB1-202ENST00000394820 SMIM22K7EJ46 135 aa14.96□□□□□ -0.01
NFKB1-202ENST00000394820 YEATS4O95619 227 aa14.96□□□□□ -0.01
NFKB1-202ENST00000394820 UQCRFS1P1P0C7P4 283 aa14.96□□□□□ -0.01
NFKB1-202ENST00000394820 TXLNAP40222 546 aa14.96□□□□□ -0.01
NFKB1-202ENST00000394820 MTIF2P46199 727 aaKnown RBP14.96□□□□□ -0.01
NFKB1-202ENST00000394820 CCDC152Q4G0S7 254 aa14.96□□□□□ -0.01
NFKB1-202ENST00000394820 EPSTI1Q96J88 318 aa14.96□□□□□ -0.01
NFKB1-202ENST00000394820 TFCP2L1Q9NZI6 479 aa14.96□□□□□ -0.01
NFKB1-202ENST00000394820 C5P01031 1676 aa14.96□□□□□ -0.01
NFKB1-202ENST00000394820 LOC102724428A0A0B4J2F2 783 aa14.96□□□□□ -0.01
NFKB1-202ENST00000394820 TRIM75PA6NK02 468 aa14.96□□□□□ -0.01
NFKB1-202ENST00000394820 CSF1RP07333 972 aa14.96□□□□□ -0.01
NFKB1-202ENST00000394820 CDC27P30260 824 aa14.96□□□□□ -0.01
NFKB1-202ENST00000394820 MNAT1P51948 309 aa14.96□□□□□ -0.01
NFKB1-202ENST00000394820 GTF2A1P52655 376 aaPredicted RBP14.96□□□□□ -0.01
NFKB1-202ENST00000394820 SIK1P57059 783 aa14.96□□□□□ -0.01
NFKB1-202ENST00000394820 TDRD12Q587J7 1177 aaKnown RBP14.96□□□□□ -0.01
NFKB1-202ENST00000394820 TRMT1LQ7Z2T5 733 aaKnown RBP14.96□□□□□ -0.01
NFKB1-202ENST00000394820 MB21D2Q8IYB1 491 aaPredicted RBP14.96□□□□□ -0.01
NFKB1-202ENST00000394820 IFNL3Q8IZI9 196 aa14.96□□□□□ -0.01
NFKB1-202ENST00000394820 LCORLQ8N3X6 602 aa14.96□□□□□ -0.01
NFKB1-202ENST00000394820 NEDD4P46934 1319 aa14.96□□□□□ -0.01
NFKB1-202ENST00000394820 RAD51AP2Q09MP3 1159 aa14.96□□□□□ -0.02
NFKB1-202ENST00000394820 CCDC122Q5T0U0 273 aa14.96□□□□□ -0.02
NFKB1-202ENST00000394820 SRGAP2O75044 1071 aa14.95□□□□□ -0.02
NFKB1-202ENST00000394820 USP5P45974 858 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms