RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 TMEM2Q9UHN6 1383 aa18.54■□□□□ 0.56
PHTF1-205ENST00000393357 SYNRGQ9UMZ2 1314 aa18.54■□□□□ 0.56
PHTF1-205ENST00000393357 KCNJ6P48051 423 aa18.54■□□□□ 0.56
PHTF1-205ENST00000393357 VPS54Q9P1Q0 977 aa18.54■□□□□ 0.56
PHTF1-205ENST00000393357 HPSEQ9Y251 543 aa18.54■□□□□ 0.56
PHTF1-205ENST00000393357 MAGEA9P43362 315 aa18.53■□□□□ 0.56
PHTF1-205ENST00000393357 RNASE9P60153 205 aaKnown RBP18.53■□□□□ 0.56
PHTF1-205ENST00000393357 CYP27A1Q02318 531 aa18.53■□□□□ 0.56
PHTF1-205ENST00000393357 ECM2O94769 699 aaPredicted RBP18.53■□□□□ 0.56
PHTF1-205ENST00000393357 MYBL2P10244 700 aa18.53■□□□□ 0.56
PHTF1-205ENST00000393357 ERVK-24P63145 666 aa18.53■□□□□ 0.56
PHTF1-205ENST00000393357 C2orf54Q08AI8 447 aa18.53■□□□□ 0.56
PHTF1-205ENST00000393357 TBX2Q13207 712 aaPredicted RBP18.53■□□□□ 0.56
PHTF1-205ENST00000393357 AMOTQ4VCS5 1084 aa18.53■□□□□ 0.56
PHTF1-205ENST00000393357 MAP3K14Q99558 947 aa18.53■□□□□ 0.56
PHTF1-205ENST00000393357 AGXT2Q9BYV1 514 aa18.53■□□□□ 0.56
PHTF1-205ENST00000393357 DUSP10Q9Y6W6 482 aa18.53■□□□□ 0.56
PHTF1-205ENST00000393357 ITSN1Q15811 1721 aa18.53■□□□□ 0.56
PHTF1-205ENST00000393357 UBN2Q6ZU65 1347 aa18.53■□□□□ 0.56
PHTF1-205ENST00000393357 SMIM22K7EJ46 135 aa18.53■□□□□ 0.56
PHTF1-205ENST00000393357 EYA2O00167 538 aa18.53■□□□□ 0.56
PHTF1-205ENST00000393357 GYPCP04921 128 aa18.53■□□□□ 0.56
PHTF1-205ENST00000393357 ATP2B2Q01814 1243 aa18.53■□□□□ 0.56
PHTF1-205ENST00000393357 KIAA1328Q86T90 577 aa18.53■□□□□ 0.56
PHTF1-205ENST00000393357 EFCC1Q9HA90 598 aa18.53■□□□□ 0.56
PHTF1-205ENST00000393357 MINDY4BA8MYZ0 360 aa18.52■□□□□ 0.56
PHTF1-205ENST00000393357 ATP2C2O75185 946 aa18.52■□□□□ 0.56
PHTF1-205ENST00000393357 TOB1P50616 345 aaPredicted RBP18.52■□□□□ 0.56
PHTF1-205ENST00000393357 UBXN1Q04323 297 aa18.52■□□□□ 0.56
PHTF1-205ENST00000393357 NR1I3Q14994 352 aa18.52■□□□□ 0.56
PHTF1-205ENST00000393357 CCDC122Q5T0U0 273 aa18.52■□□□□ 0.56
PHTF1-205ENST00000393357 NOSTRINQ8IVI9 506 aa18.52■□□□□ 0.56
PHTF1-205ENST00000393357 MIGA1Q8NAN2 632 aa18.52■□□□□ 0.56
PHTF1-205ENST00000393357 SMCR8Q8TEV9 937 aaPredicted RBP18.52■□□□□ 0.56
PHTF1-205ENST00000393357 ATP1A1P05023 1023 aaKnown RBP18.52■□□□□ 0.55
PHTF1-205ENST00000393357 PTPRUQ92729 1446 aa18.52■□□□□ 0.55
PHTF1-205ENST00000393357 TNRQ92752 1358 aa18.52■□□□□ 0.55
PHTF1-205ENST00000393357 A0A087X0B3 334 aa18.51■□□□□ 0.55
PHTF1-205ENST00000393357 SSBP05455 408 aaKnown RBP eCLIP18.51■□□□□ 0.55
PHTF1-205ENST00000393357 EZH2Q15910 746 aaKnown RBP18.51■□□□□ 0.55
PHTF1-205ENST00000393357 METTL24Q5JXM2 366 aa18.51■□□□□ 0.55
PHTF1-205ENST00000393357 BCAS4Q8TDM0 211 aa18.51■□□□□ 0.55
PHTF1-205ENST00000393357 EHD2Q9NZN4 543 aa18.51■□□□□ 0.55
PHTF1-205ENST00000393357 TDO2P48775 406 aa18.51■□□□□ 0.55
PHTF1-205ENST00000393357 CABP4P57796 275 aa18.51■□□□□ 0.55
PHTF1-205ENST00000393357 STIM1Q13586 685 aa18.51■□□□□ 0.55
PHTF1-205ENST00000393357 FCHSD1Q86WN1 690 aa18.51■□□□□ 0.55
PHTF1-205ENST00000393357 ANKRD13CQ8N6S4 541 aa18.51■□□□□ 0.55
PHTF1-205ENST00000393357 TRIM49BA6NDI0 452 aa18.51■□□□□ 0.55
PHTF1-205ENST00000393357 PRKAB2O43741 272 aa18.51■□□□□ 0.55
PHTF1-205ENST00000393357 AIDAQ96BJ3 306 aa18.51■□□□□ 0.55
PHTF1-205ENST00000393357 FAM212AQ96EL1 285 aa18.51■□□□□ 0.55
PHTF1-205ENST00000393357 KAT14Q9H8E8 782 aa18.51■□□□□ 0.55
PHTF1-205ENST00000393357 MFAP3LO75121 409 aa18.5■□□□□ 0.55
PHTF1-205ENST00000393357 SNRPA1P09661 255 aaKnown RBP18.5■□□□□ 0.55
PHTF1-205ENST00000393357 IL15P40933 162 aaPredicted RBP18.5■□□□□ 0.55
PHTF1-205ENST00000393357 DPYDQ12882 1025 aa18.5■□□□□ 0.55
PHTF1-205ENST00000393357 ENOX2Q16206 610 aaKnown RBP18.5■□□□□ 0.55
PHTF1-205ENST00000393357 PTPROQ16827 1216 aa18.5■□□□□ 0.55
PHTF1-205ENST00000393357 MAP9Q49MG5 647 aa18.5■□□□□ 0.55
PHTF1-205ENST00000393357 SND1Q7KZF4 910 aaKnown RBP eCLIP18.5■□□□□ 0.55
PHTF1-205ENST00000393357 MLKLQ8NB16 471 aa18.5■□□□□ 0.55
PHTF1-205ENST00000393357 PLEKHG2Q9H7P9 1386 aa18.5■□□□□ 0.55
PHTF1-205ENST00000393357 FOXO4P98177 505 aa18.5■□□□□ 0.55
PHTF1-205ENST00000393357 PPM1EQ8WY54 764 aa18.5■□□□□ 0.55
PHTF1-205ENST00000393357 CWC25Q9NXE8 425 aaPredicted RBP18.5■□□□□ 0.55
PHTF1-205ENST00000393357 RRP36Q96EU6 259 aaKnown RBP18.49■□□□□ 0.55
PHTF1-205ENST00000393357 ACBD3Q9H3P7 528 aa18.49■□□□□ 0.55
PHTF1-205ENST00000393357 CNNM1Q9NRU3 951 aa18.49■□□□□ 0.55
PHTF1-205ENST00000393357 ZSWIM5Q9P217 1185 aa18.49■□□□□ 0.55
PHTF1-205ENST00000393357 DACH1Q9UI36 760 aa18.49■□□□□ 0.55
PHTF1-205ENST00000393357 MON2Q7Z3U7 1717 aa18.49■□□□□ 0.55
PHTF1-205ENST00000393357 NRXN3Q9Y4C0 1643 aa18.49■□□□□ 0.55
PHTF1-205ENST00000393357 PPP6R2O75170 966 aa18.49■□□□□ 0.55
PHTF1-205ENST00000393357 CDKL5O76039 1030 aa18.49■□□□□ 0.55
PHTF1-205ENST00000393357 ERLIN2O94905 339 aa18.49■□□□□ 0.55
PHTF1-205ENST00000393357 NAP1L1P55209 391 aaKnown RBP18.49■□□□□ 0.55
PHTF1-205ENST00000393357 TOM1L2Q6ZVM7 507 aa18.49■□□□□ 0.55
PHTF1-205ENST00000393357 SH2D3CQ8N5H7 860 aa18.49■□□□□ 0.55
PHTF1-205ENST00000393357 FAM71BQ8TC56 605 aa18.49■□□□□ 0.55
PHTF1-205ENST00000393357 ENOX1Q8TC92 643 aaKnown RBP18.49■□□□□ 0.55
PHTF1-205ENST00000393357 ARMT1Q9H993 441 aa18.49■□□□□ 0.55
PHTF1-205ENST00000393357 GOLGA6CA6NDK9 693 aa18.49■□□□□ 0.55
PHTF1-205ENST00000393357 GOLGA6DP0CG33 693 aa18.49■□□□□ 0.55
PHTF1-205ENST00000393357 ZNF18P17022 549 aa18.49■□□□□ 0.55
PHTF1-205ENST00000393357 SLC52A2Q9HAB3 445 aa18.49■□□□□ 0.55
PHTF1-205ENST00000393357 GOLGA6AQ9NYA3 693 aa18.49■□□□□ 0.55
PHTF1-205ENST00000393357 WWC3Q9ULE0 1092 aa18.49■□□□□ 0.55
PHTF1-205ENST00000393357 WNT7AO00755 349 aa18.48■□□□□ 0.55
PHTF1-205ENST00000393357 RNF187Q5TA31 235 aaPredicted RBP18.48■□□□□ 0.55
PHTF1-205ENST00000393357 TRIM22Q8IYM9 498 aa18.48■□□□□ 0.55
PHTF1-205ENST00000393357 HDAC7Q8WUI4 952 aa18.48■□□□□ 0.55
PHTF1-205ENST00000393357 SYMPKQ92797 1274 aaKnown RBP18.48■□□□□ 0.55
PHTF1-205ENST00000393357 NBPF3Q9H094 633 aa18.48■□□□□ 0.55
PHTF1-205ENST00000393357 NAPBQ9H115 298 aa18.48■□□□□ 0.55
PHTF1-205ENST00000393357 ZMYM6O95789 1325 aa18.48■□□□□ 0.55
PHTF1-205ENST00000393357 PDE6BP35913 854 aa18.48■□□□□ 0.55
PHTF1-205ENST00000393357 PLCD1P51178 756 aa18.48■□□□□ 0.55
PHTF1-205ENST00000393357 EARS2Q5JPH6 523 aaKnown RBP18.48■□□□□ 0.55
PHTF1-205ENST00000393357 APPBP2Q92624 585 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms