RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 MYBL1P10243 752 aa8.52□□□□□ -1.05
VTI1A-201ENST00000393077 IL13P35225 146 aa8.52□□□□□ -1.05
VTI1A-201ENST00000393077 GRIK3Q13003 919 aa8.52□□□□□ -1.05
VTI1A-201ENST00000393077 CACNA2D4Q7Z3S7 1137 aa8.52□□□□□ -1.05
VTI1A-201ENST00000393077 RPGRIP1Q96KN7 1286 aa8.52□□□□□ -1.05
VTI1A-201ENST00000393077 RMDN2Q96LZ7 410 aa8.52□□□□□ -1.05
VTI1A-201ENST00000393077 CLIC6Q96NY7 704 aa8.52□□□□□ -1.05
VTI1A-201ENST00000393077 SCOCQ9UIL1 159 aa8.52□□□□□ -1.05
VTI1A-201ENST00000393077 ERICH2A1L162 156 aa8.52□□□□□ -1.05
VTI1A-201ENST00000393077 DNAJC8O75937 253 aaPredicted RBP8.52□□□□□ -1.05
VTI1A-201ENST00000393077 PDHA1P08559 390 aa8.52□□□□□ -1.05
VTI1A-201ENST00000393077 PARP1P09874 1014 aaKnown RBP8.52□□□□□ -1.05
VTI1A-201ENST00000393077 CABP4P57796 275 aa8.52□□□□□ -1.05
VTI1A-201ENST00000393077 KLHL10Q6JEL2 608 aa8.52□□□□□ -1.05
VTI1A-201ENST00000393077 CADPS2Q86UW7 1296 aa8.52□□□□□ -1.05
VTI1A-201ENST00000393077 CCDC155Q8N6L0 562 aa8.52□□□□□ -1.05
VTI1A-201ENST00000393077 ANKRD24Q8TF21 1146 aa8.52□□□□□ -1.05
VTI1A-201ENST00000393077 TCEANC2Q96MN5 208 aa8.52□□□□□ -1.05
VTI1A-201ENST00000393077 RHBDL2Q9NX52 303 aa8.52□□□□□ -1.05
VTI1A-201ENST00000393077 ROBO2Q9HCK4 1378 aa8.52□□□□□ -1.05
VTI1A-201ENST00000393077 RNF17Q9BXT8 1623 aaKnown RBP8.51□□□□□ -1.05
VTI1A-201ENST00000393077 E9PCH4 1651 aa8.51□□□□□ -1.05
VTI1A-201ENST00000393077 PTCD1O75127 700 aaKnown RBP8.51□□□□□ -1.05
VTI1A-201ENST00000393077 SASH1O94885 1247 aa8.51□□□□□ -1.05
VTI1A-201ENST00000393077 RTN3O95197 1032 aaPredicted RBP8.51□□□□□ -1.05
VTI1A-201ENST00000393077 NLRP5P59047 1200 aa8.51□□□□□ -1.05
VTI1A-201ENST00000393077 NNTQ13423 1086 aa8.51□□□□□ -1.05
VTI1A-201ENST00000393077 TRIM29Q14134 588 aa8.51□□□□□ -1.05
VTI1A-201ENST00000393077 MUM1Q2TAK8 710 aa8.51□□□□□ -1.05
VTI1A-201ENST00000393077 CCDC80Q76M96 950 aa8.51□□□□□ -1.05
VTI1A-201ENST00000393077 SLC35F6Q8N357 371 aa8.51□□□□□ -1.05
VTI1A-201ENST00000393077 PPFIBP2Q8ND30 876 aa8.51□□□□□ -1.05
VTI1A-201ENST00000393077 DDX17Q92841 729 aaKnown RBP8.51□□□□□ -1.05
VTI1A-201ENST00000393077 KCNB2Q92953 911 aa8.51□□□□□ -1.05
VTI1A-201ENST00000393077 FGD4Q96M96 766 aa8.51□□□□□ -1.05
VTI1A-201ENST00000393077 MTRQ99707 1265 aa8.51□□□□□ -1.05
VTI1A-201ENST00000393077 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.51□□□□□ -1.05
VTI1A-201ENST00000393077 IL16Q14005 1332 aa8.51□□□□□ -1.05
VTI1A-201ENST00000393077 EVI5O60447 810 aa8.51□□□□□ -1.05
VTI1A-201ENST00000393077 USP5P45974 858 aa8.51□□□□□ -1.05
VTI1A-201ENST00000393077 SFSWAPQ12872 951 aaKnown RBP8.51□□□□□ -1.05
VTI1A-201ENST00000393077 SETDB1Q15047 1291 aa8.51□□□□□ -1.05
VTI1A-201ENST00000393077 SEPT7Q16181 437 aaKnown RBP8.51□□□□□ -1.05
VTI1A-201ENST00000393077 TSGA10IPQ3SY00 556 aa8.51□□□□□ -1.05
VTI1A-201ENST00000393077 CUL5Q93034 780 aa8.51□□□□□ -1.05
VTI1A-201ENST00000393077 FTOQ9C0B1 505 aaKnown RBP eCLIP8.51□□□□□ -1.05
VTI1A-201ENST00000393077 NOD2Q9HC29 1040 aa8.51□□□□□ -1.05
VTI1A-201ENST00000393077 ARHGAP31Q2M1Z3 1444 aa8.51□□□□□ -1.05
VTI1A-201ENST00000393077 EDC4Q6P2E9 1401 aaKnown RBP8.51□□□□□ -1.05
VTI1A-201ENST00000393077 ATP6V1G1O75348 118 aa8.51□□□□□ -1.05
VTI1A-201ENST00000393077 GCP02774 474 aa8.51□□□□□ -1.05
VTI1A-201ENST00000393077 ZFXP17010 805 aaPredicted RBP8.51□□□□□ -1.05
VTI1A-201ENST00000393077 CCT4P50991 539 aaKnown RBP8.51□□□□□ -1.05
VTI1A-201ENST00000393077 TMED1Q13445 227 aa8.51□□□□□ -1.05
VTI1A-201ENST00000393077 IQCB1Q15051 598 aa8.51□□□□□ -1.05
VTI1A-201ENST00000393077 RSRC2Q7L4I2 434 aaKnown RBP8.51□□□□□ -1.05
VTI1A-201ENST00000393077 SELENOOQ9BVL4 669 aa8.51□□□□□ -1.05
VTI1A-201ENST00000393077 C19orf44Q9H6X5 657 aa8.51□□□□□ -1.05
VTI1A-201ENST00000393077 PICK1Q9NRD5 415 aa8.51□□□□□ -1.05
VTI1A-201ENST00000393077 FANCLQ9NW38 375 aa8.51□□□□□ -1.05
VTI1A-201ENST00000393077 ZFATQ9P243 1243 aa8.51□□□□□ -1.05
VTI1A-201ENST00000393077 CDHR2Q9BYE9 1310 aa8.5□□□□□ -1.05
VTI1A-201ENST00000393077 PRR36Q9H6K5 1346 aa8.5□□□□□ -1.05
VTI1A-201ENST00000393077 ANP32DO95626 131 aa8.5□□□□□ -1.05
VTI1A-201ENST00000393077 Q4G0T1 1027 aa8.5□□□□□ -1.05
VTI1A-201ENST00000393077 PNKPQ96T60 521 aa8.5□□□□□ -1.05
VTI1A-201ENST00000393077 CEP131Q9UPN4 1083 aa8.5□□□□□ -1.05
VTI1A-201ENST00000393077 SAR1BQ9Y6B6 198 aa8.5□□□□□ -1.05
VTI1A-201ENST00000393077 TRPM1Q7Z4N2 1603 aa8.5□□□□□ -1.05
VTI1A-201ENST00000393077 KIF1BO60333 1816 aa8.5□□□□□ -1.05
VTI1A-201ENST00000393077 VIMP08670 466 aaKnown RBP8.5□□□□□ -1.05
VTI1A-201ENST00000393077 PIP4K2AP48426 406 aaPredicted RBP8.5□□□□□ -1.05
VTI1A-201ENST00000393077 G3BP1Q13283 466 aaKnown RBP eCLIP8.5□□□□□ -1.05
VTI1A-201ENST00000393077 NLRP14Q86W24 1093 aa8.5□□□□□ -1.05
VTI1A-201ENST00000393077 RASSF8Q8NHQ8 419 aa8.5□□□□□ -1.05
VTI1A-201ENST00000393077 C17orf50Q8WW18 174 aa8.5□□□□□ -1.05
VTI1A-201ENST00000393077 HVCN1Q96D96 273 aa8.5□□□□□ -1.05
VTI1A-201ENST00000393077 MYO1AQ9UBC5 1043 aa8.5□□□□□ -1.05
VTI1A-201ENST00000393077 SNX14Q9Y5W7 946 aa8.5□□□□□ -1.05
VTI1A-201ENST00000393077 LRRIQ3A6PVS8 624 aaPredicted RBP8.5□□□□□ -1.05
VTI1A-201ENST00000393077 NR1D1P20393 614 aa8.5□□□□□ -1.05
VTI1A-201ENST00000393077 RAB27AP51159 221 aa8.5□□□□□ -1.05
VTI1A-201ENST00000393077 DNA2P51530 1060 aa8.5□□□□□ -1.05
VTI1A-201ENST00000393077 NLRP12P59046 1061 aa8.5□□□□□ -1.05
VTI1A-201ENST00000393077 ZNF473Q8WTR7 871 aaKnown RBP8.5□□□□□ -1.05
VTI1A-201ENST00000393077 KIAA1468Q9P260 1216 aa8.5□□□□□ -1.05
VTI1A-201ENST00000393077 ABCF2Q9UG63 623 aa8.5□□□□□ -1.05
VTI1A-201ENST00000393077 RPS6KL1Q9Y6S9 549 aa8.5□□□□□ -1.05
VTI1A-201ENST00000393077 FLT4P35916 1363 aa8.5□□□□□ -1.05
VTI1A-201ENST00000393077 PLEKHG3A1L390 1219 aa8.49□□□□□ -1.05
VTI1A-201ENST00000393077 KRT86O43790 486 aa8.49□□□□□ -1.05
VTI1A-201ENST00000393077 VAMP4O75379 141 aa8.49□□□□□ -1.05
VTI1A-201ENST00000393077 FLOT1O75955 427 aa8.49□□□□□ -1.05
VTI1A-201ENST00000393077 IMPDH2P12268 514 aa8.49□□□□□ -1.05
VTI1A-201ENST00000393077 CDC25CP30307 473 aa8.49□□□□□ -1.05
VTI1A-201ENST00000393077 SYKP43405 635 aa8.49□□□□□ -1.05
VTI1A-201ENST00000393077 SPA17Q15506 151 aa8.49□□□□□ -1.05
VTI1A-201ENST00000393077 PTPN21Q16825 1174 aa8.49□□□□□ -1.05
VTI1A-201ENST00000393077 RUFY3Q7L099 469 aa8.49□□□□□ -1.05
VTI1A-201ENST00000393077 MSL3Q8N5Y2 521 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms