RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 GLRX3O76003 335 aaKnown RBP11.16□□□□□ -0.62
HMGN1-202ENST00000380747 SPRYD7Q5W111 196 aa11.16□□□□□ -0.62
HMGN1-202ENST00000380747 TMED8Q6PL24 325 aaPredicted RBP11.16□□□□□ -0.62
HMGN1-202ENST00000380747 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.16□□□□□ -0.62
HMGN1-202ENST00000380747 WRNIP1Q96S55 665 aa11.16□□□□□ -0.62
HMGN1-202ENST00000380747 OSBPL5Q9H0X9 879 aaPredicted RBP11.16□□□□□ -0.62
HMGN1-202ENST00000380747 ELP3Q9H9T3 547 aa11.16□□□□□ -0.62
HMGN1-202ENST00000380747 CEP290O15078 2479 aa11.16□□□□□ -0.62
HMGN1-202ENST00000380747 A0A0C4DFX4 3053 aa11.16□□□□□ -0.62
HMGN1-202ENST00000380747 TCRBV5S4A2TA0A5A2 114 aa11.15□□□□□ -0.62
HMGN1-202ENST00000380747 MANSC4A6NHS7 340 aaPredicted RBP11.15□□□□□ -0.62
HMGN1-202ENST00000380747 TULP1O00294 542 aaPredicted RBP11.15□□□□□ -0.62
HMGN1-202ENST00000380747 ZBTB48P10074 688 aaPredicted RBP11.15□□□□□ -0.62
HMGN1-202ENST00000380747 ADD2P35612 726 aa11.15□□□□□ -0.62
HMGN1-202ENST00000380747 USP5P45974 858 aa11.15□□□□□ -0.62
HMGN1-202ENST00000380747 VGLL4Q14135 290 aa11.15□□□□□ -0.62
HMGN1-202ENST00000380747 SLFNL1Q499Z3 407 aa11.15□□□□□ -0.62
HMGN1-202ENST00000380747 ZSCAN25Q6NSZ9 544 aa11.15□□□□□ -0.62
HMGN1-202ENST00000380747 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.15□□□□□ -0.62
HMGN1-202ENST00000380747 CHD1LQ86WJ1 897 aa11.15□□□□□ -0.62
HMGN1-202ENST00000380747 CERS3Q8IU89 383 aa11.15□□□□□ -0.62
HMGN1-202ENST00000380747 PLPP6Q8IY26 295 aa11.15□□□□□ -0.62
HMGN1-202ENST00000380747 PI4K2BQ8TCG2 481 aa11.15□□□□□ -0.62
HMGN1-202ENST00000380747 ZKSCAN4Q969J2 545 aaPredicted RBP11.15□□□□□ -0.62
HMGN1-202ENST00000380747 WNK4Q96J92 1243 aa11.15□□□□□ -0.62
HMGN1-202ENST00000380747 R3HDMLQ9H3Y0 253 aa11.15□□□□□ -0.62
HMGN1-202ENST00000380747 EMILIN3Q9NT22 766 aa11.15□□□□□ -0.62
HMGN1-202ENST00000380747 SAP30BPQ9UHR5 308 aaKnown RBP11.15□□□□□ -0.62
HMGN1-202ENST00000380747 DOCK2Q92608 1830 aa11.14□□□□□ -0.63
HMGN1-202ENST00000380747 FLT1P17948 1338 aa11.14□□□□□ -0.63
HMGN1-202ENST00000380747 CHGBP05060 677 aa11.14□□□□□ -0.63
HMGN1-202ENST00000380747 SLURP2P0DP57 97 aa11.14□□□□□ -0.63
HMGN1-202ENST00000380747 INPP5BP32019 993 aa11.14□□□□□ -0.63
HMGN1-202ENST00000380747 NUCB1Q02818 461 aa11.14□□□□□ -0.63
HMGN1-202ENST00000380747 SLC4A8Q2Y0W8 1093 aa11.14□□□□□ -0.63
HMGN1-202ENST00000380747 TMEM92Q6UXU6 159 aa11.14□□□□□ -0.63
HMGN1-202ENST00000380747 OTOP1Q7RTM1 612 aa11.14□□□□□ -0.63
HMGN1-202ENST00000380747 LCORLQ8N3X6 602 aa11.14□□□□□ -0.63
HMGN1-202ENST00000380747 KBTBD3Q8NAB2 608 aa11.14□□□□□ -0.63
HMGN1-202ENST00000380747 ARMC5Q96C12 935 aa11.14□□□□□ -0.63
HMGN1-202ENST00000380747 OPTNQ96CV9 577 aa11.14□□□□□ -0.63
HMGN1-202ENST00000380747 RIOK1Q9BRS2 568 aaKnown RBP11.14□□□□□ -0.63
HMGN1-202ENST00000380747 CRNKL1Q9BZJ0 848 aaKnown RBP11.14□□□□□ -0.63
HMGN1-202ENST00000380747 ARMT1Q9H993 441 aa11.14□□□□□ -0.63
HMGN1-202ENST00000380747 MYO5AQ9Y4I1 1855 aaKnown RBP11.14□□□□□ -0.63
HMGN1-202ENST00000380747 RBBP6Q7Z6E9 1792 aaKnown RBP11.13□□□□□ -0.63
HMGN1-202ENST00000380747 SALL3Q9BXA9 1300 aa11.13□□□□□ -0.63
HMGN1-202ENST00000380747 FAM196BA6NMK8 535 aa11.13□□□□□ -0.63
HMGN1-202ENST00000380747 MBD4O95243 580 aa11.13□□□□□ -0.63
HMGN1-202ENST00000380747 PDE1AP54750 535 aa11.13□□□□□ -0.63
HMGN1-202ENST00000380747 UBE3CQ15386 1083 aa11.13□□□□□ -0.63
HMGN1-202ENST00000380747 OTUD5Q96G74 571 aa11.13□□□□□ -0.63
HMGN1-202ENST00000380747 FSD1Q9BTV5 496 aa11.13□□□□□ -0.63
HMGN1-202ENST00000380747 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.13□□□□□ -0.63
HMGN1-202ENST00000380747 STAP2Q9UGK3 403 aa11.13□□□□□ -0.63
HMGN1-202ENST00000380747 ZNF112Q9UJU3 913 aa11.13□□□□□ -0.63
HMGN1-202ENST00000380747 PALD1Q9ULE6 856 aa11.13□□□□□ -0.63
HMGN1-202ENST00000380747 TRIM17Q9Y577 477 aa11.13□□□□□ -0.63
HMGN1-202ENST00000380747 SNCAIPQ9Y6H5 919 aa11.13□□□□□ -0.63
HMGN1-202ENST00000380747 ATRNL1Q5VV63 1379 aa11.13□□□□□ -0.63
HMGN1-202ENST00000380747 LAMB1P07942 1786 aa11.13□□□□□ -0.63
HMGN1-202ENST00000380747 COL2A1P02458 1487 aaPredicted RBP11.12□□□□□ -0.63
HMGN1-202ENST00000380747 DPYSL4O14531 572 aa11.12□□□□□ -0.63
HMGN1-202ENST00000380747 RNF113AO15541 343 aaKnown RBP11.12□□□□□ -0.63
HMGN1-202ENST00000380747 HLA-DOAP06340 250 aa11.12□□□□□ -0.63
HMGN1-202ENST00000380747 GJA5P36382 358 aa11.12□□□□□ -0.63
HMGN1-202ENST00000380747 LRRFIP1Q32MZ4 808 aaKnown RBP11.12□□□□□ -0.63
HMGN1-202ENST00000380747 CRACR2BQ8N4Y2 399 aaPredicted RBP11.12□□□□□ -0.63
HMGN1-202ENST00000380747 ERO1AQ96HE7 468 aa11.12□□□□□ -0.63
HMGN1-202ENST00000380747 TRIM34Q9BYJ4 488 aa11.12□□□□□ -0.63
HMGN1-202ENST00000380747 DHX36Q9H2U1 1008 aaKnown RBP11.12□□□□□ -0.63
HMGN1-202ENST00000380747 PI4KBQ9UBF8 816 aa11.12□□□□□ -0.63
HMGN1-202ENST00000380747 PTPN22Q9Y2R2 807 aa11.12□□□□□ -0.63
HMGN1-202ENST00000380747 SPDYE5A6NIY4 337 aa11.11□□□□□ -0.63
HMGN1-202ENST00000380747 PHF20L1A8MW92 1017 aa11.11□□□□□ -0.63
HMGN1-202ENST00000380747 PRKAB2O43741 272 aa11.11□□□□□ -0.63
HMGN1-202ENST00000380747 TBC1D12O60347 775 aa11.11□□□□□ -0.63
HMGN1-202ENST00000380747 CENPBP07199 599 aaPredicted RBP11.11□□□□□ -0.63
HMGN1-202ENST00000380747 ZFYP08048 801 aaPredicted RBP11.11□□□□□ -0.63
HMGN1-202ENST00000380747 FXR1P51114 621 aaKnown RBP eCLIP11.11□□□□□ -0.63
HMGN1-202ENST00000380747 ERO1BQ86YB8 467 aa11.11□□□□□ -0.63
HMGN1-202ENST00000380747 SDR42E1Q8WUS8 393 aa11.11□□□□□ -0.63
HMGN1-202ENST00000380747 PUS7LQ9H0K6 701 aaKnown RBP11.11□□□□□ -0.63
HMGN1-202ENST00000380747 PICK1Q9NRD5 415 aa11.11□□□□□ -0.63
HMGN1-202ENST00000380747 AK9Q5TCS8 1911 aa11.11□□□□□ -0.63
HMGN1-202ENST00000380747 OTOFQ9HC10 1997 aa11.1□□□□□ -0.63
HMGN1-202ENST00000380747 TRIOBPQ9H2D6 2365 aa11.1□□□□□ -0.63
HMGN1-202ENST00000380747 TRIM6-TRIM34B2RNG4 842 aa11.1□□□□□ -0.63
HMGN1-202ENST00000380747 IGF2BP3O00425 579 aaKnown RBP eCLIP11.1□□□□□ -0.63
HMGN1-202ENST00000380747 POLR3DP05423 398 aaPredicted RBP11.1□□□□□ -0.63
HMGN1-202ENST00000380747 NEFLP07196 543 aa11.1□□□□□ -0.63
HMGN1-202ENST00000380747 MAP3K10Q02779 954 aa11.1□□□□□ -0.63
HMGN1-202ENST00000380747 NOL9Q5SY16 702 aaKnown RBP11.1□□□□□ -0.63
HMGN1-202ENST00000380747 OTUD7BQ6GQQ9 843 aa11.1□□□□□ -0.63
HMGN1-202ENST00000380747 TTC6Q86TZ1 520 aa11.1□□□□□ -0.63
HMGN1-202ENST00000380747 FOXP4Q8IVH2 680 aaPredicted RBP11.1□□□□□ -0.63
HMGN1-202ENST00000380747 PLEKHM2Q8IWE5 1019 aa11.1□□□□□ -0.63
HMGN1-202ENST00000380747 SCYL3Q8IZE3 742 aa11.1□□□□□ -0.63
HMGN1-202ENST00000380747 APPBP2Q92624 585 aa11.1□□□□□ -0.63
HMGN1-202ENST00000380747 EVI5LQ96CN4 794 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms