RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 PNMA6EA0A0J9YXQ4 647 aa7.46□□□□□ -1.22
NEDD9-202ENST00000379446 DYNC1I1O14576 645 aa7.46□□□□□ -1.22
NEDD9-202ENST00000379446 SEMA3EO15041 775 aa7.46□□□□□ -1.22
NEDD9-202ENST00000379446 GPSM2P81274 684 aa7.46□□□□□ -1.22
NEDD9-202ENST00000379446 KIF23Q02241 960 aaPredicted RBP7.46□□□□□ -1.22
NEDD9-202ENST00000379446 SP3Q02447 781 aa7.46□□□□□ -1.22
NEDD9-202ENST00000379446 C1orf228Q6PIY5 440 aa7.46□□□□□ -1.22
NEDD9-202ENST00000379446 LRRC47Q8N1G4 583 aaKnown RBP7.46□□□□□ -1.22
NEDD9-202ENST00000379446 GAS2L1Q99501 681 aaPredicted RBP7.46□□□□□ -1.22
NEDD9-202ENST00000379446 ESYT1Q9BSJ8 1104 aa7.46□□□□□ -1.22
NEDD9-202ENST00000379446 GBP3Q9H0R5 595 aa7.46□□□□□ -1.22
NEDD9-202ENST00000379446 MFSD1Q9H3U5 465 aa7.46□□□□□ -1.22
NEDD9-202ENST00000379446 PI4KBQ9UBF8 816 aa7.46□□□□□ -1.22
NEDD9-202ENST00000379446 LRRC7Q96NW7 1537 aa7.46□□□□□ -1.22
NEDD9-202ENST00000379446 KIDINS220Q9ULH0 1771 aa7.46□□□□□ -1.22
NEDD9-202ENST00000379446 CA12O43570 354 aa7.46□□□□□ -1.22
NEDD9-202ENST00000379446 RARBP10826 455 aa7.46□□□□□ -1.22
NEDD9-202ENST00000379446 APOL6Q9BWW8 343 aa7.46□□□□□ -1.22
NEDD9-202ENST00000379446 FAM49AQ9H0Q0 323 aaPredicted RBP7.46□□□□□ -1.22
NEDD9-202ENST00000379446 CD209Q9NNX6 404 aa7.46□□□□□ -1.22
NEDD9-202ENST00000379446 HOXC10Q9NYD6 342 aa7.46□□□□□ -1.22
NEDD9-202ENST00000379446 USP25Q9UHP3 1055 aa7.46□□□□□ -1.22
NEDD9-202ENST00000379446 CEP83Q9Y592 693 aa7.46□□□□□ -1.22
NEDD9-202ENST00000379446 KIAA1210Q9ULL0 1709 aa7.45□□□□□ -1.22
NEDD9-202ENST00000379446 USP17L10C9JJH3 530 aa7.45□□□□□ -1.22
NEDD9-202ENST00000379446 FCER1AP12319 257 aa7.45□□□□□ -1.22
NEDD9-202ENST00000379446 ELF1P32519 619 aa7.45□□□□□ -1.22
NEDD9-202ENST00000379446 RSBN1LQ6PCB5 846 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-202ENST00000379446 USP50Q70EL3 339 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-202ENST00000379446 ANKRD13CQ8N6S4 541 aa7.45□□□□□ -1.22
NEDD9-202ENST00000379446 ARRDC4Q8NCT1 418 aa7.45□□□□□ -1.22
NEDD9-202ENST00000379446 SLC17A8Q8NDX2 589 aa7.45□□□□□ -1.22
NEDD9-202ENST00000379446 NCOA7Q8NI08 942 aa7.45□□□□□ -1.22
NEDD9-202ENST00000379446 CRAMP1Q96RY5 1269 aa7.45□□□□□ -1.22
NEDD9-202ENST00000379446 VWDEQ8N2E2 1590 aa7.45□□□□□ -1.22
NEDD9-202ENST00000379446 RTL1A6NKG5 1358 aa7.45□□□□□ -1.22
NEDD9-202ENST00000379446 TMOD1P28289 359 aa7.45□□□□□ -1.22
NEDD9-202ENST00000379446 MCM2P49736 904 aa7.45□□□□□ -1.22
NEDD9-202ENST00000379446 ARPP19P56211 112 aa7.45□□□□□ -1.22
NEDD9-202ENST00000379446 RNF180Q86T96 592 aa7.45□□□□□ -1.22
NEDD9-202ENST00000379446 ZFP91Q96JP5 570 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-202ENST00000379446 CCDC94Q9BW85 323 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-202ENST00000379446 PALD1Q9ULE6 856 aa7.45□□□□□ -1.22
NEDD9-202ENST00000379446 ABCA9Q8IUA7 1624 aa7.45□□□□□ -1.22
NEDD9-202ENST00000379446 TBCAO75347 108 aaKnown RBP7.45□□□□□ -1.22
NEDD9-202ENST00000379446 HOXB7P09629 217 aa7.45□□□□□ -1.22
NEDD9-202ENST00000379446 U2AF2P26368 475 aaKnown RBP eCLIP7.45□□□□□ -1.224e-7■■□□□ 14.3
NEDD9-202ENST00000379446 TFAP4Q01664 338 aa7.45□□□□□ -1.22
NEDD9-202ENST00000379446 ARID5AQ03989 594 aa7.45□□□□□ -1.22
NEDD9-202ENST00000379446 SLFN13Q68D06 897 aa7.45□□□□□ -1.22
NEDD9-202ENST00000379446 OLFM4Q6UX06 510 aa7.45□□□□□ -1.22
NEDD9-202ENST00000379446 SERPINB13Q9UIV8 391 aa7.45□□□□□ -1.22
NEDD9-202ENST00000379446 MROH1Q8NDA8 1641 aa7.45□□□□□ -1.22
NEDD9-202ENST00000379446 USP17L12C9JPN9 530 aa7.44□□□□□ -1.22
NEDD9-202ENST00000379446 USP17L21D6R901 530 aa7.44□□□□□ -1.22
NEDD9-202ENST00000379446 TRAF5O00463 557 aa7.44□□□□□ -1.22
NEDD9-202ENST00000379446 NKX1-1Q15270 411 aaPredicted RBP7.44□□□□□ -1.22
NEDD9-202ENST00000379446 CCDC157Q569K6 752 aa7.44□□□□□ -1.22
NEDD9-202ENST00000379446 DBNDD2Q9BQY9 259 aa7.44□□□□□ -1.22
NEDD9-202ENST00000379446 LMBRD1Q9NUN5 540 aa7.44□□□□□ -1.22
NEDD9-202ENST00000379446 NEURL1BA8MQ27 555 aa7.44□□□□□ -1.22
NEDD9-202ENST00000379446 GH2P01242 217 aa7.44□□□□□ -1.22
NEDD9-202ENST00000379446 CPA1P15085 419 aa7.44□□□□□ -1.22
NEDD9-202ENST00000379446 SSRP1Q08945 709 aaKnown RBP7.44□□□□□ -1.22
NEDD9-202ENST00000379446 USP37Q86T82 979 aa7.44□□□□□ -1.22
NEDD9-202ENST00000379446 RPS6KC1Q96S38 1066 aa7.44□□□□□ -1.22
NEDD9-202ENST00000379446 HMX1Q9NP08 348 aaPredicted RBP7.44□□□□□ -1.22
NEDD9-202ENST00000379446 NUB1Q9Y5A7 615 aa7.44□□□□□ -1.22
NEDD9-202ENST00000379446 MAP1BP46821 2468 aaKnown RBP7.44□□□□□ -1.22
NEDD9-202ENST00000379446 DEPDC5O75140 1603 aa7.44□□□□□ -1.22
NEDD9-202ENST00000379446 KIF4AO95239 1232 aa7.44□□□□□ -1.22
NEDD9-202ENST00000379446 CCT2P78371 535 aaKnown RBP7.44□□□□□ -1.22
NEDD9-202ENST00000379446 FERMT3Q86UX7 667 aa7.44□□□□□ -1.22
NEDD9-202ENST00000379446 CCDC83Q8IWF9 413 aa7.44□□□□□ -1.22
NEDD9-202ENST00000379446 C7orf31Q8N865 590 aa7.44□□□□□ -1.22
NEDD9-202ENST00000379446 NKX2-3Q8TAU0 364 aa7.44□□□□□ -1.22
NEDD9-202ENST00000379446 CAMKK2Q96RR4 588 aa7.44□□□□□ -1.22
NEDD9-202ENST00000379446 PSMD1Q99460 953 aa7.44□□□□□ -1.22
NEDD9-202ENST00000379446 SLC26A6Q9BXS9 759 aa7.44□□□□□ -1.22
NEDD9-202ENST00000379446 CNNM2Q9H8M5 875 aa7.44□□□□□ -1.22
NEDD9-202ENST00000379446 MSRAQ9UJ68 235 aa7.44□□□□□ -1.22
NEDD9-202ENST00000379446 ZKSCAN5Q9Y2L8 839 aa7.44□□□□□ -1.22
NEDD9-202ENST00000379446 CLTCQ00610 1675 aaKnown RBP7.44□□□□□ -1.22
NEDD9-202ENST00000379446 CASTP20810 708 aaKnown RBP7.44□□□□□ -1.22
NEDD9-202ENST00000379446 BRPF1P55201 1214 aaPredicted RBP7.44□□□□□ -1.22
NEDD9-202ENST00000379446 PROSER3Q2NL68 480 aa7.44□□□□□ -1.22
NEDD9-202ENST00000379446 GNASQ5JWF2 1037 aa7.44□□□□□ -1.22
NEDD9-202ENST00000379446 PTF1AQ7RTS3 328 aa7.44□□□□□ -1.22
NEDD9-202ENST00000379446 DHX36Q9H2U1 1008 aaKnown RBP7.44□□□□□ -1.22
NEDD9-202ENST00000379446 PRDM4Q9UKN5 801 aa7.44□□□□□ -1.22
NEDD9-202ENST00000379446 LMTK2Q8IWU2 1503 aa7.43□□□□□ -1.22
NEDD9-202ENST00000379446 ARHGAP31Q2M1Z3 1444 aa7.43□□□□□ -1.22
NEDD9-202ENST00000379446 WDR33Q9C0J8 1336 aaKnown RBP7.43□□□□□ -1.22
NEDD9-202ENST00000379446 PQBP1O60828 265 aaKnown RBP7.43□□□□□ -1.22
NEDD9-202ENST00000379446 MARCKSP29966 332 aaPredicted RBP7.43□□□□□ -1.22
NEDD9-202ENST00000379446 KMT5BQ4FZB7 885 aa7.43□□□□□ -1.22
NEDD9-202ENST00000379446 JMYQ8N9B5 988 aa7.43□□□□□ -1.22
NEDD9-202ENST00000379446 CCDC148Q8NFR7 591 aa7.43□□□□□ -1.22
NEDD9-202ENST00000379446 EVI5LQ96CN4 794 aa7.43□□□□□ -1.22
NEDD9-202ENST00000379446 SUCLG2Q96I99 432 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms