RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 TC2NQ8N9U0 490 aa23.31■■□□□ 1.32
CLN5-201ENST00000377453 BAG1Q99933 345 aaPredicted RBP23.31■■□□□ 1.32
CLN5-201ENST00000377453 ZNF34Q8IZ26 560 aa23.3■■□□□ 1.32
CLN5-201ENST00000377453 CPLX3Q8WVH0 158 aa23.3■■□□□ 1.32
CLN5-201ENST00000377453 KRT23Q9C075 422 aa23.3■■□□□ 1.32
CLN5-201ENST00000377453 MROH5Q6ZUA9 1318 aa23.3■■□□□ 1.32
CLN5-201ENST00000377453 STK36Q9NRP7 1315 aa23.3■■□□□ 1.32
CLN5-201ENST00000377453 ACTN4O43707 911 aaKnown RBP23.3■■□□□ 1.32
CLN5-201ENST00000377453 KCNJ6P48051 423 aa23.3■■□□□ 1.32
CLN5-201ENST00000377453 FANCBQ8NB91 859 aa23.3■■□□□ 1.32
CLN5-201ENST00000377453 CYP7A1P22680 504 aa23.29■■□□□ 1.32
CLN5-201ENST00000377453 GNG11P61952 73 aa23.29■■□□□ 1.32
CLN5-201ENST00000377453 MNS1Q8NEH6 495 aa23.29■■□□□ 1.32
CLN5-201ENST00000377453 STAG1Q8WVM7 1258 aa23.29■■□□□ 1.32
CLN5-201ENST00000377453 FHOD1Q9Y613 1164 aa23.29■■□□□ 1.32
CLN5-201ENST00000377453 PLEKHA8P1O95397 391 aa23.29■■□□□ 1.32
CLN5-201ENST00000377453 CD44P16070 742 aaKnown RBP23.29■■□□□ 1.32
CLN5-201ENST00000377453 MORC3Q14149 939 aa23.29■■□□□ 1.32
CLN5-201ENST00000377453 ZNF18P17022 549 aa23.29■■□□□ 1.32
CLN5-201ENST00000377453 PPARAQ07869 468 aa23.29■■□□□ 1.32
CLN5-201ENST00000377453 TBX2Q13207 712 aaPredicted RBP23.29■■□□□ 1.32
CLN5-201ENST00000377453 TNKSO95271 1327 aa23.28■■□□□ 1.32
CLN5-201ENST00000377453 PHLPP2Q6ZVD8 1323 aa23.28■■□□□ 1.32
CLN5-201ENST00000377453 ERICH2A1L162 156 aa23.28■■□□□ 1.32
CLN5-201ENST00000377453 DYNLL1P63167 89 aaKnown RBP23.28■■□□□ 1.32
CLN5-201ENST00000377453 TERF2Q15554 542 aa23.28■■□□□ 1.32
CLN5-201ENST00000377453 UBXN4Q92575 508 aa23.28■■□□□ 1.32
CLN5-201ENST00000377453 CNNM2Q9H8M5 875 aa23.28■■□□□ 1.32
CLN5-201ENST00000377453 FAM53CQ9NYF3 392 aa23.28■■□□□ 1.32
CLN5-201ENST00000377453 LRP6O75581 1613 aa23.28■■□□□ 1.32
CLN5-201ENST00000377453 ERICH4A6NGS2 130 aa23.28■■□□□ 1.32
CLN5-201ENST00000377453 DEXIO95424 95 aa23.28■■□□□ 1.32
CLN5-201ENST00000377453 GYG1P46976 350 aa23.28■■□□□ 1.32
CLN5-201ENST00000377453 SARSP49591 514 aaKnown RBP23.28■■□□□ 1.32
CLN5-201ENST00000377453 ACSBG1Q96GR2 724 aa23.28■■□□□ 1.32
CLN5-201ENST00000377453 UBAC1Q9BSL1 405 aa23.28■■□□□ 1.32
CLN5-201ENST00000377453 ZSWIM4Q9H7M6 989 aa23.28■■□□□ 1.32
CLN5-201ENST00000377453 SOWAHDA6NJG2 315 aa23.27■■□□□ 1.32
CLN5-201ENST00000377453 SLC4A8Q2Y0W8 1093 aa23.27■■□□□ 1.32
CLN5-201ENST00000377453 COL4A1P02462 1669 aa23.27■■□□□ 1.32
CLN5-201ENST00000377453 ADAMTS3O15072 1205 aa23.27■■□□□ 1.32
CLN5-201ENST00000377453 TADA3O75528 432 aa23.27■■□□□ 1.32
CLN5-201ENST00000377453 SART3Q15020 963 aaKnown RBP23.27■■□□□ 1.32
CLN5-201ENST00000377453 RILPL1Q5EBL4 403 aa23.27■■□□□ 1.32
CLN5-201ENST00000377453 WASF1Q92558 559 aa23.27■■□□□ 1.32
CLN5-201ENST00000377453 NACAP1Q9BZK3 213 aa23.27■■□□□ 1.32
CLN5-201ENST00000377453 FOXP1Q9H334 677 aaPredicted RBP23.27■■□□□ 1.32
CLN5-201ENST00000377453 MRPL44Q9H9J2 332 aaKnown RBP23.27■■□□□ 1.32
CLN5-201ENST00000377453 BCL9O00512 1426 aa23.26■■□□□ 1.31
CLN5-201ENST00000377453 ARHGAP6O43182 974 aa23.26■■□□□ 1.31
CLN5-201ENST00000377453 GABPB1Q06547 395 aaPredicted RBP23.26■■□□□ 1.31
CLN5-201ENST00000377453 ZNF174Q15697 407 aa23.26■■□□□ 1.31
CLN5-201ENST00000377453 SPECC1LQ69YQ0 1117 aa23.26■■□□□ 1.31
CLN5-201ENST00000377453 RAI14Q9P0K7 980 aa23.26■■□□□ 1.31
CLN5-201ENST00000377453 CHRNDQ07001 517 aa23.26■■□□□ 1.31
CLN5-201ENST00000377453 SRPRBQ9Y5M8 271 aaKnown RBP23.26■■□□□ 1.31
CLN5-201ENST00000377453 KIF20AO95235 890 aa23.25■■□□□ 1.31
CLN5-201ENST00000377453 PNMA6AP0CW24 399 aaPredicted RBP23.25■■□□□ 1.31
CLN5-201ENST00000377453 V9GY48 417 aaPredicted RBP23.25■■□□□ 1.31
CLN5-201ENST00000377453 MYH3P11055 1940 aa23.25■■□□□ 1.31
CLN5-201ENST00000377453 PKN1Q16512 942 aa23.25■■□□□ 1.31
CLN5-201ENST00000377453 TEX35Q5T0J7 233 aa23.25■■□□□ 1.31
CLN5-201ENST00000377453 SMIM5Q71RC9 77 aa23.25■■□□□ 1.31
CLN5-201ENST00000377453 TFRCP02786 760 aaKnown RBP23.24■■□□□ 1.31
CLN5-201ENST00000377453 PLA2G4AP47712 749 aa23.24■■□□□ 1.31
CLN5-201ENST00000377453 ENOX1Q8TC92 643 aaKnown RBP23.24■■□□□ 1.31
CLN5-201ENST00000377453 SYMPKQ92797 1274 aaKnown RBP23.24■■□□□ 1.31
CLN5-201ENST00000377453 LZTFL1Q9NQ48 299 aa23.24■■□□□ 1.31
CLN5-201ENST00000377453 NUP98P52948 1817 aa23.24■■□□□ 1.31
CLN5-201ENST00000377453 NMT2O60551 498 aa23.24■■□□□ 1.31
CLN5-201ENST00000377453 VEGFAP15692 232 aaPredicted RBP23.24■■□□□ 1.31
CLN5-201ENST00000377453 DPYDQ12882 1025 aa23.24■■□□□ 1.31
CLN5-201ENST00000377453 ENAHQ8N8S7 591 aaPredicted RBP23.24■■□□□ 1.31
CLN5-201ENST00000377453 BAZ2BQ9UIF8 2168 aaKnown RBP23.23■■□□□ 1.31
CLN5-201ENST00000377453 CASQ1P31415 396 aa23.23■■□□□ 1.31
CLN5-201ENST00000377453 SEC23AQ15436 765 aa23.23■■□□□ 1.31
CLN5-201ENST00000377453 C3orf67Q6ZVT6 689 aa23.23■■□□□ 1.31
CLN5-201ENST00000377453 MLKLQ8NB16 471 aa23.23■■□□□ 1.31
CLN5-201ENST00000377453 BLZF1Q9H2G9 400 aa23.23■■□□□ 1.31
CLN5-201ENST00000377453 ITGB4P16144 1822 aa23.23■■□□□ 1.31
CLN5-201ENST00000377453 ZSCAN12O43309 604 aa23.23■■□□□ 1.31
CLN5-201ENST00000377453 IL6STP40189 918 aaPredicted RBP23.23■■□□□ 1.31
CLN5-201ENST00000377453 NT5DC1Q5TFE4 455 aa23.23■■□□□ 1.31
CLN5-201ENST00000377453 HOOK1Q9UJC3 728 aaKnown RBP23.23■■□□□ 1.31
CLN5-201ENST00000377453 CREBRFQ8IUR6 639 aa23.22■■□□□ 1.31
CLN5-201ENST00000377453 ERVV-1B6SEH8 477 aa23.22■■□□□ 1.31
CLN5-201ENST00000377453 POLR3GO15318 223 aaPredicted RBP23.22■■□□□ 1.31
CLN5-201ENST00000377453 CCP110O43303 1012 aa23.22■■□□□ 1.31
CLN5-201ENST00000377453 INTS5Q6P9B9 1019 aaKnown RBP23.22■■□□□ 1.31
CLN5-201ENST00000377453 TRIM75PA6NK02 468 aa23.21■■□□□ 1.31
CLN5-201ENST00000377453 IGHMBP2P38935 993 aaKnown RBP23.21■■□□□ 1.31
CLN5-201ENST00000377453 PLCD1P51178 756 aa23.21■■□□□ 1.31
CLN5-201ENST00000377453 RBL2Q08999 1139 aa23.21■■□□□ 1.31
CLN5-201ENST00000377453 NR1I3Q14994 352 aa23.21■■□□□ 1.31
CLN5-201ENST00000377453 RAD9BQ6WBX8 426 aa23.21■■□□□ 1.31
CLN5-201ENST00000377453 KIFC2Q96AC6 838 aa23.21■■□□□ 1.31
CLN5-201ENST00000377453 NIP7Q9Y221 180 aaKnown RBP eCLIP23.21■■□□□ 1.31
CLN5-201ENST00000377453 CHD4Q14839 1912 aa23.21■■□□□ 1.31
CLN5-201ENST00000377453 PNPLA7Q6ZV29 1317 aa23.21■■□□□ 1.31
CLN5-201ENST00000377453 AKAP17AQ02040 695 aaKnown RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms