RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 ZBTB10Q96DT7 871 aa17.6■□□□□ 0.41
FXN-201ENST00000377270 FUT8Q9BYC5 575 aa17.6■□□□□ 0.41
FXN-201ENST00000377270 AGXT2Q9BYV1 514 aa17.6■□□□□ 0.41
FXN-201ENST00000377270 CD248Q9HCU0 757 aa17.6■□□□□ 0.41
FXN-201ENST00000377270 HAND2P61296 217 aa17.6■□□□□ 0.41
FXN-201ENST00000377270 RESTQ13127 1097 aa17.6■□□□□ 0.41
FXN-201ENST00000377270 SETDB1Q15047 1291 aa17.6■□□□□ 0.41
FXN-201ENST00000377270 NSUN7Q8NE18 718 aaKnown RBP17.6■□□□□ 0.41
FXN-201ENST00000377270 PUS7LQ9H0K6 701 aaKnown RBP17.6■□□□□ 0.41
FXN-201ENST00000377270 CHCHD3Q9NX63 227 aaKnown RBP17.6■□□□□ 0.41
FXN-201ENST00000377270 RIC1Q4ADV7 1423 aa17.6■□□□□ 0.41
FXN-201ENST00000377270 LAMA4Q16363 1823 aa17.59■□□□□ 0.41
FXN-201ENST00000377270 BECN2A8MW95 431 aa17.59■□□□□ 0.41
FXN-201ENST00000377270 CTDNEP1O95476 244 aa17.59■□□□□ 0.41
FXN-201ENST00000377270 PYGLP06737 847 aa17.59■□□□□ 0.41
FXN-201ENST00000377270 MRPL12P52815 198 aaKnown RBP17.59■□□□□ 0.41
FXN-201ENST00000377270 FOSBP53539 338 aa17.59■□□□□ 0.41
FXN-201ENST00000377270 PREPLQ4J6C6 727 aaPredicted RBP17.59■□□□□ 0.41
FXN-201ENST00000377270 APPBP2Q92624 585 aa17.59■□□□□ 0.41
FXN-201ENST00000377270 EPC1Q9H2F5 836 aa17.59■□□□□ 0.41
FXN-201ENST00000377270 NCOA5Q9HCD5 579 aaKnown RBP17.59■□□□□ 0.41
FXN-201ENST00000377270 NRDCO43847 1150 aa17.59■□□□□ 0.41
FXN-201ENST00000377270 PDE8AO60658 829 aa17.59■□□□□ 0.41
FXN-201ENST00000377270 FGAP02671 866 aa17.59■□□□□ 0.41
FXN-201ENST00000377270 IL6STP40189 918 aaPredicted RBP17.59■□□□□ 0.41
FXN-201ENST00000377270 MCAMP43121 646 aa17.59■□□□□ 0.41
FXN-201ENST00000377270 NAP1L1P55209 391 aaKnown RBP17.59■□□□□ 0.41
FXN-201ENST00000377270 STX1AQ16623 288 aa17.59■□□□□ 0.41
FXN-201ENST00000377270 IMMTQ16891 758 aaKnown RBP17.59■□□□□ 0.41
FXN-201ENST00000377270 OSBPL5Q9H0X9 879 aaPredicted RBP17.59■□□□□ 0.41
FXN-201ENST00000377270 COL14A1Q05707 1796 aaKnown RBP17.58■□□□□ 0.41
FXN-201ENST00000377270 PTPDC1A2A3K4 754 aa17.58■□□□□ 0.41
FXN-201ENST00000377270 ERVV-1B6SEH8 477 aa17.58■□□□□ 0.41
FXN-201ENST00000377270 FOXP2O15409 715 aa17.58■□□□□ 0.41
FXN-201ENST00000377270 PECAM1P16284 738 aaPredicted RBP17.58■□□□□ 0.41
FXN-201ENST00000377270 MAGEA8P43361 318 aa17.58■□□□□ 0.41
FXN-201ENST00000377270 ATP2B2Q01814 1243 aa17.58■□□□□ 0.41
FXN-201ENST00000377270 DDR1Q08345 913 aa17.58■□□□□ 0.41
FXN-201ENST00000377270 ARFGAP3Q9NP61 516 aa17.58■□□□□ 0.41
FXN-201ENST00000377270 PICK1Q9NRD5 415 aa17.58■□□□□ 0.41
FXN-201ENST00000377270 PCDHGA4Q9Y5G9 962 aa17.58■□□□□ 0.41
FXN-201ENST00000377270 PPFIA3O75145 1194 aa17.58■□□□□ 0.4
FXN-201ENST00000377270 PDIA3P30101 505 aaKnown RBP17.58■□□□□ 0.4
FXN-201ENST00000377270 SKIDA1Q1XH10 827 aa17.58■□□□□ 0.4
FXN-201ENST00000377270 PGBD1Q96JS3 809 aa17.58■□□□□ 0.4
FXN-201ENST00000377270 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.58■□□□□ 0.45e-9■■■■■ 167.7
FXN-201ENST00000377270 IMPACTQ9P2X3 320 aa17.58■□□□□ 0.4
FXN-201ENST00000377270 G3BP2Q9UN86 482 aaKnown RBP17.58■□□□□ 0.4
FXN-201ENST00000377270 CLNS1AP54105 237 aaKnown RBP17.57■□□□□ 0.4
FXN-201ENST00000377270 IQCA1Q86XH1 822 aa17.57■□□□□ 0.4
FXN-201ENST00000377270 C3orf20Q8ND61 904 aa17.57■□□□□ 0.4
FXN-201ENST00000377270 ZNF274Q96GC6 653 aaPredicted RBP17.57■□□□□ 0.4
FXN-201ENST00000377270 CABS1Q96KC9 395 aa17.57■□□□□ 0.4
FXN-201ENST00000377270 LRP6O75581 1613 aa17.57■□□□□ 0.4
FXN-201ENST00000377270 UBN2Q6ZU65 1347 aa17.57■□□□□ 0.4
FXN-201ENST00000377270 PDE8BO95263 885 aa17.57■□□□□ 0.4
FXN-201ENST00000377270 IBSPP21815 317 aaPredicted RBP17.57■□□□□ 0.4
FXN-201ENST00000377270 KCNJ6P48051 423 aa17.57■□□□□ 0.4
FXN-201ENST00000377270 ACRBPQ8NEB7 543 aa17.57■□□□□ 0.4
FXN-201ENST00000377270 CRACR2AQ9BSW2 395 aa17.57■□□□□ 0.4
FXN-201ENST00000377270 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.57■□□□□ 0.4
FXN-201ENST00000377270 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.57■□□□□ 0.4
FXN-201ENST00000377270 ABCC12Q96J65 1359 aa17.57■□□□□ 0.4
FXN-201ENST00000377270 GPAA1O43292 621 aa17.56■□□□□ 0.4
FXN-201ENST00000377270 SETSIPP0DME0 302 aa17.56■□□□□ 0.4
FXN-201ENST00000377270 PDE6BP35913 854 aa17.56■□□□□ 0.4
FXN-201ENST00000377270 DHX40Q8IX18 779 aaKnown RBP17.56■□□□□ 0.4
FXN-201ENST00000377270 VGLL2Q8N8G2 317 aa17.56■□□□□ 0.4
FXN-201ENST00000377270 PROCA1Q8NCQ7 364 aaPredicted RBP17.56■□□□□ 0.4
FXN-201ENST00000377270 RMI1Q9H9A7 625 aa17.56■□□□□ 0.4
FXN-201ENST00000377270 GPHNQ9NQX3 736 aaPredicted RBP17.56■□□□□ 0.4
FXN-201ENST00000377270 LMCD1Q9NZU5 365 aa17.56■□□□□ 0.4
FXN-201ENST00000377270 A0A1B0GUA9 196 aa17.56■□□□□ 0.4
FXN-201ENST00000377270 EFCAB8A8MWE9 144 aa17.56■□□□□ 0.4
FXN-201ENST00000377270 TADA3O75528 432 aa17.56■□□□□ 0.4
FXN-201ENST00000377270 PEX19P40855 299 aa17.56■□□□□ 0.4
FXN-201ENST00000377270 ZNF34Q8IZ26 560 aa17.56■□□□□ 0.4
FXN-201ENST00000377270 IRX2Q9BZI1 471 aaPredicted RBP17.56■□□□□ 0.4
FXN-201ENST00000377270 PHLPP2Q6ZVD8 1323 aa17.56■□□□□ 0.4
FXN-201ENST00000377270 TMCO5BA8MYB1 307 aa17.55■□□□□ 0.4
FXN-201ENST00000377270 CHUKO15111 745 aa17.55■□□□□ 0.4
FXN-201ENST00000377270 TPD52L2O43399 206 aaKnown RBP17.55■□□□□ 0.4
FXN-201ENST00000377270 ADAMTS2O95450 1211 aa17.55■□□□□ 0.4
FXN-201ENST00000377270 SLC9C2Q5TAH2 1124 aa17.55■□□□□ 0.4
FXN-201ENST00000377270 MFSD4BQ5TF39 518 aa17.55■□□□□ 0.4
FXN-201ENST00000377270 HELBQ8NG08 1087 aaPredicted RBP17.55■□□□□ 0.4
FXN-201ENST00000377270 CFAP45Q9UL16 551 aa17.55■□□□□ 0.4
FXN-201ENST00000377270 RAB27AP51159 221 aa17.55■□□□□ 0.4
FXN-201ENST00000377270 ETF1P62495 437 aaKnown RBP17.55■□□□□ 0.4
FXN-201ENST00000377270 CEBPZQ03701 1054 aaKnown RBP17.55■□□□□ 0.4
FXN-201ENST00000377270 NAA16Q6N069 864 aaPredicted RBP17.55■□□□□ 0.4
FXN-201ENST00000377270 CCDC150Q8NCX0 1101 aa17.55■□□□□ 0.4
FXN-201ENST00000377270 MKL1Q969V6 931 aa17.55■□□□□ 0.4
FXN-201ENST00000377270 PDE11AQ9HCR9 933 aa17.55■□□□□ 0.4
FXN-201ENST00000377270 FAN1Q9Y2M0 1017 aa17.55■□□□□ 0.4
FXN-201ENST00000377270 ZNF213O14771 459 aa17.54■□□□□ 0.4
FXN-201ENST00000377270 CD151P48509 253 aa17.54■□□□□ 0.4
FXN-201ENST00000377270 HHATQ5VTY9 493 aa17.54■□□□□ 0.4
FXN-201ENST00000377270 NCAPG2Q86XI2 1143 aa17.54■□□□□ 0.4
FXN-201ENST00000377270 HOMER1Q86YM7 354 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms