RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 PPP1R12AO14974 1030 aaPredicted RBP23.26■■□□□ 1.31
TMEFF1-201ENST00000374879 FSBPO95073 299 aa23.26■■□□□ 1.31
TMEFF1-201ENST00000374879 RDXP35241 583 aaKnown RBP23.26■■□□□ 1.31
TMEFF1-201ENST00000374879 ZC3H6P61129 1189 aaKnown RBP23.26■■□□□ 1.31
TMEFF1-201ENST00000374879 CHUKO15111 745 aa23.26■■□□□ 1.31
TMEFF1-201ENST00000374879 SPECC1Q5M775 1068 aa23.26■■□□□ 1.31
TMEFF1-201ENST00000374879 AMOTL1Q8IY63 956 aa23.26■■□□□ 1.31
TMEFF1-201ENST00000374879 ENC1O14682 589 aa23.25■■□□□ 1.31
TMEFF1-201ENST00000374879 APTXQ7Z2E3 356 aaKnown RBP23.25■■□□□ 1.31
TMEFF1-201ENST00000374879 FAXDC2Q96IV6 333 aa23.25■■□□□ 1.31
TMEFF1-201ENST00000374879 CAMTA1Q9Y6Y1 1673 aa23.25■■□□□ 1.31
TMEFF1-201ENST00000374879 PATL2C9JE40 543 aaKnown RBP23.25■■□□□ 1.31
TMEFF1-201ENST00000374879 NEXNQ0ZGT2 675 aa23.25■■□□□ 1.31
TMEFF1-201ENST00000374879 TRAPPC11Q7Z392 1133 aa23.25■■□□□ 1.31
TMEFF1-201ENST00000374879 BCCIPQ9P287 314 aaKnown RBP eCLIP23.25■■□□□ 1.31
TMEFF1-201ENST00000374879 FXR1P51114 621 aaKnown RBP eCLIP23.24■■□□□ 1.31
TMEFF1-201ENST00000374879 ERVK-24P63145 666 aa23.24■■□□□ 1.31
TMEFF1-201ENST00000374879 ATP2B2Q01814 1243 aa23.24■■□□□ 1.31
TMEFF1-201ENST00000374879 JMYQ8N9B5 988 aa23.24■■□□□ 1.31
TMEFF1-201ENST00000374879 MLKLQ8NB16 471 aa23.24■■□□□ 1.31
TMEFF1-201ENST00000374879 RAPGEF4Q8WZA2 1011 aa23.24■■□□□ 1.31
TMEFF1-201ENST00000374879 VEZTQ9HBM0 779 aa23.24■■□□□ 1.31
TMEFF1-201ENST00000374879 MYO1AQ9UBC5 1043 aa23.24■■□□□ 1.31
TMEFF1-201ENST00000374879 ZNF142P52746 1687 aaPredicted RBP23.24■■□□□ 1.31
TMEFF1-201ENST00000374879 NEURL1BA8MQ27 555 aa23.24■■□□□ 1.31
TMEFF1-201ENST00000374879 SRGAP2O75044 1071 aa23.24■■□□□ 1.31
TMEFF1-201ENST00000374879 KIAA0754O94854 1291 aa23.24■■□□□ 1.31
TMEFF1-201ENST00000374879 PREPLQ4J6C6 727 aaPredicted RBP23.24■■□□□ 1.31
TMEFF1-201ENST00000374879 CCNI2Q6ZMN8 369 aaPredicted RBP23.24■■□□□ 1.31
TMEFF1-201ENST00000374879 AIFM3Q96NN9 605 aa23.24■■□□□ 1.31
TMEFF1-201ENST00000374879 SH3GL2Q99962 352 aa23.24■■□□□ 1.31
TMEFF1-201ENST00000374879 NDUFAB1O14561 156 aa23.23■■□□□ 1.31
TMEFF1-201ENST00000374879 TRHP20396 242 aaPredicted RBP23.23■■□□□ 1.31
TMEFF1-201ENST00000374879 IBSPP21815 317 aaPredicted RBP23.23■■□□□ 1.31
TMEFF1-201ENST00000374879 XAGE3Q8WTP9 111 aa23.23■■□□□ 1.31
TMEFF1-201ENST00000374879 HINFPQ9BQA5 517 aa23.23■■□□□ 1.31
TMEFF1-201ENST00000374879 SLC52A2Q9HAB3 445 aa23.23■■□□□ 1.31
TMEFF1-201ENST00000374879 TRIM10Q9UDY6 481 aa23.23■■□□□ 1.31
TMEFF1-201ENST00000374879 RGPD5Q99666 1765 aa23.23■■□□□ 1.31
TMEFF1-201ENST00000374879 MEFVO15553 781 aaPredicted RBP23.23■■□□□ 1.31
TMEFF1-201ENST00000374879 NF2P35240 595 aa23.23■■□□□ 1.31
TMEFF1-201ENST00000374879 PBX1P40424 430 aa23.23■■□□□ 1.31
TMEFF1-201ENST00000374879 CEP120Q8N960 986 aa23.23■■□□□ 1.31
TMEFF1-201ENST00000374879 MAP3K14Q99558 947 aa23.23■■□□□ 1.31
TMEFF1-201ENST00000374879 ECM2O94769 699 aaPredicted RBP23.22■■□□□ 1.31
TMEFF1-201ENST00000374879 PAX7P23759 505 aa23.22■■□□□ 1.31
TMEFF1-201ENST00000374879 GCKRQ14397 625 aa23.22■■□□□ 1.31
TMEFF1-201ENST00000374879 POSTNQ15063 836 aa23.22■■□□□ 1.31
TMEFF1-201ENST00000374879 B4GALNT4Q76KP1 1039 aa23.22■■□□□ 1.31
TMEFF1-201ENST00000374879 COPS6Q7L5N1 327 aa23.22■■□□□ 1.31
TMEFF1-201ENST00000374879 MYD88Q99836 296 aa23.22■■□□□ 1.31
TMEFF1-201ENST00000374879 NLRP2Q9NX02 1062 aa23.22■■□□□ 1.31
TMEFF1-201ENST00000374879 HPS5Q9UPZ3 1129 aa23.22■■□□□ 1.31
TMEFF1-201ENST00000374879 TARSL2A2RTX5 802 aaKnown RBP23.22■■□□□ 1.31
TMEFF1-201ENST00000374879 GYPCP04921 128 aa23.22■■□□□ 1.31
TMEFF1-201ENST00000374879 MORC3Q14149 939 aa23.22■■□□□ 1.31
TMEFF1-201ENST00000374879 GRAMD1CQ8IYS0 662 aa23.22■■□□□ 1.31
TMEFF1-201ENST00000374879 CAPZA3Q96KX2 299 aa23.22■■□□□ 1.31
TMEFF1-201ENST00000374879 SLF1Q9BQI6 1058 aa23.22■■□□□ 1.31
TMEFF1-201ENST00000374879 DSCC1Q9BVC3 393 aa23.22■■□□□ 1.31
TMEFF1-201ENST00000374879 WWC3Q9ULE0 1092 aa23.22■■□□□ 1.31
TMEFF1-201ENST00000374879 ODF2LQ9ULJ1 636 aa23.22■■□□□ 1.31
TMEFF1-201ENST00000374879 KLF18A0A0U1RQI7 1052 aa23.21■■□□□ 1.31
TMEFF1-201ENST00000374879 CPLX1O14810 134 aa23.21■■□□□ 1.31
TMEFF1-201ENST00000374879 EPHA10Q5JZY3 1008 aa23.21■■□□□ 1.31
TMEFF1-201ENST00000374879 VPS37DQ86XT2 251 aa23.21■■□□□ 1.31
TMEFF1-201ENST00000374879 ANKRD18AQ8IVF6 992 aa23.21■■□□□ 1.31
TMEFF1-201ENST00000374879 DACH1Q9UI36 760 aa23.21■■□□□ 1.31
TMEFF1-201ENST00000374879 GUCA1BQ9UMX6 200 aa23.21■■□□□ 1.31
TMEFF1-201ENST00000374879 CCDC9Q9Y3X0 531 aaKnown RBP23.21■■□□□ 1.31
TMEFF1-201ENST00000374879 ADAMTS7Q9UKP4 1686 aa23.21■■□□□ 1.31
TMEFF1-201ENST00000374879 ATXN2Q99700 1313 aaKnown RBP23.21■■□□□ 1.31
TMEFF1-201ENST00000374879 GOLGA8BA8MQT2 603 aa23.21■■□□□ 1.31
TMEFF1-201ENST00000374879 SH3TC1Q8TE82 1336 aa23.21■■□□□ 1.31
TMEFF1-201ENST00000374879 NEBLO76041 1014 aa23.2■■□□□ 1.3
TMEFF1-201ENST00000374879 A1BGP04217 495 aa23.2■■□□□ 1.3
TMEFF1-201ENST00000374879 HSPD1P10809 573 aaKnown RBP23.2■■□□□ 1.3
TMEFF1-201ENST00000374879 TNNI3KQ59H18 835 aa23.2■■□□□ 1.3
TMEFF1-201ENST00000374879 SGSM3Q96HU1 749 aa23.2■■□□□ 1.3
TMEFF1-201ENST00000374879 TRPM3Q9HCF6 1732 aaPredicted RBP23.2■■□□□ 1.3
TMEFF1-201ENST00000374879 KLC4Q9NSK0 619 aa23.2■■□□□ 1.3
TMEFF1-201ENST00000374879 FPGT-TNNI3KV9GXZ4 949 aa23.2■■□□□ 1.3
TMEFF1-201ENST00000374879 MYH8P13535 1937 aa23.2■■□□□ 1.3
TMEFF1-201ENST00000374879 KDM6AO15550 1401 aaPredicted RBP23.2■■□□□ 1.3
TMEFF1-201ENST00000374879 SARSP49591 514 aaKnown RBP23.2■■□□□ 1.3
TMEFF1-201ENST00000374879 PDCLQ13371 301 aa23.2■■□□□ 1.3
TMEFF1-201ENST00000374879 CNGA4Q8IV77 575 aa23.2■■□□□ 1.3
TMEFF1-201ENST00000374879 HAUS7Q99871 368 aa23.2■■□□□ 1.3
TMEFF1-201ENST00000374879 DBNDD2Q9BQY9 259 aa23.2■■□□□ 1.3
TMEFF1-201ENST00000374879 METTL22Q9BUU2 404 aaPredicted RBP23.2■■□□□ 1.3
TMEFF1-201ENST00000374879 ADD3Q9UEY8 706 aaKnown RBP23.2■■□□□ 1.3
TMEFF1-201ENST00000374879 RFX7Q2KHR2 1363 aa23.2■■□□□ 1.3
TMEFF1-201ENST00000374879 ATP1A1P05023 1023 aaKnown RBP23.19■■□□□ 1.3
TMEFF1-201ENST00000374879 GCFC2P16383 781 aaKnown RBP23.19■■□□□ 1.3
TMEFF1-201ENST00000374879 ACTN3Q08043 901 aaPredicted RBP23.19■■□□□ 1.3
TMEFF1-201ENST00000374879 TFCP2Q12800 502 aa23.19■■□□□ 1.3
TMEFF1-201ENST00000374879 NBPF14Q5TI25 921 aa23.19■■□□□ 1.3
TMEFF1-201ENST00000374879 TMTC1Q8IUR5 882 aa23.19■■□□□ 1.3
TMEFF1-201ENST00000374879 ZNF496Q96IT1 587 aaPredicted RBP23.19■■□□□ 1.3
TMEFF1-201ENST00000374879 C5P01031 1676 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms