RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 MYO1AQ9UBC5 1043 aa19.83■□□□□ 0.76
CHTOP-203ENST00000368690 ANGEL1Q9UNK9 670 aaKnown RBP19.83■□□□□ 0.76
CHTOP-203ENST00000368690 PNKPQ96T60 521 aa19.82■□□□□ 0.76
CHTOP-203ENST00000368690 TTF2Q9UNY4 1162 aaKnown RBP19.82■□□□□ 0.76
CHTOP-203ENST00000368690 CTAGE9A4FU28 777 aa19.81■□□□□ 0.76
CHTOP-203ENST00000368690 EYA2O00167 538 aa19.81■□□□□ 0.76
CHTOP-203ENST00000368690 PLCD1P51178 756 aa19.81■□□□□ 0.76
CHTOP-203ENST00000368690 TTLL7Q6ZT98 887 aa19.81■□□□□ 0.76
CHTOP-203ENST00000368690 ZNF579Q8NAF0 562 aaKnown RBP19.81■□□□□ 0.76
CHTOP-203ENST00000368690 APPBP2Q92624 585 aa19.81■□□□□ 0.76
CHTOP-203ENST00000368690 VIPAS39Q9H9C1 493 aa19.81■□□□□ 0.76
CHTOP-203ENST00000368690 ABCB6Q9NP58 842 aa19.81■□□□□ 0.76
CHTOP-203ENST00000368690 ATRNO75882 1429 aa19.81■□□□□ 0.76
CHTOP-203ENST00000368690 ZNF213O14771 459 aa19.81■□□□□ 0.76
CHTOP-203ENST00000368690 ATP6V1AP38606 617 aa19.81■□□□□ 0.76
CHTOP-203ENST00000368690 METAP2P50579 478 aaKnown RBP eCLIP19.81■□□□□ 0.76
CHTOP-203ENST00000368690 HAND2P61296 217 aa19.81■□□□□ 0.76
CHTOP-203ENST00000368690 TRIM29Q14134 588 aa19.81■□□□□ 0.76
CHTOP-203ENST00000368690 PTPN21Q16825 1174 aa19.81■□□□□ 0.76
CHTOP-203ENST00000368690 HSP90B2PQ58FF3 399 aa19.81■□□□□ 0.76
CHTOP-203ENST00000368690 SEPT12Q8IYM1 358 aa19.81■□□□□ 0.76
CHTOP-203ENST00000368690 SPATA20Q8TB22 786 aa19.81■□□□□ 0.76
CHTOP-203ENST00000368690 ZBTB3Q9H5J0 574 aa19.81■□□□□ 0.76
CHTOP-203ENST00000368690 STK36Q9NRP7 1315 aa19.81■□□□□ 0.76
CHTOP-203ENST00000368690 SOWAHDA6NJG2 315 aa19.8■□□□□ 0.76
CHTOP-203ENST00000368690 SEMA3EO15041 775 aa19.8■□□□□ 0.76
CHTOP-203ENST00000368690 PBX1P40424 430 aa19.8■□□□□ 0.76
CHTOP-203ENST00000368690 CASP8Q14790 479 aa19.8■□□□□ 0.76
CHTOP-203ENST00000368690 RAD9BQ6WBX8 426 aa19.8■□□□□ 0.76
CHTOP-203ENST00000368690 PPFIBP1Q86W92 1011 aa19.8■□□□□ 0.76
CHTOP-203ENST00000368690 BRMS1Q9HCU9 246 aa19.8■□□□□ 0.76
CHTOP-203ENST00000368690 MYH7P12883 1935 aa19.8■□□□□ 0.76
CHTOP-203ENST00000368690 THSD7AQ9UPZ6 1657 aa19.8■□□□□ 0.76
CHTOP-203ENST00000368690 ATP5J2-PTCD1G3V325 749 aa19.8■□□□□ 0.76
CHTOP-203ENST00000368690 MTF1Q14872 753 aa19.8■□□□□ 0.76
CHTOP-203ENST00000368690 WDR93Q6P2C0 686 aa19.8■□□□□ 0.76
CHTOP-203ENST00000368690 FAN1Q9Y2M0 1017 aa19.8■□□□□ 0.76
CHTOP-203ENST00000368690 PTPREP23469 700 aa19.79■□□□□ 0.76
CHTOP-203ENST00000368690 ICE2Q659A1 982 aa19.79■□□□□ 0.76
CHTOP-203ENST00000368690 APTXQ7Z2E3 356 aaKnown RBP19.79■□□□□ 0.76
CHTOP-203ENST00000368690 AIFM3Q96NN9 605 aa19.79■□□□□ 0.76
CHTOP-203ENST00000368690 CTAGE1Q96RT6 745 aa19.79■□□□□ 0.76
CHTOP-203ENST00000368690 IRX2Q9BZI1 471 aaPredicted RBP19.79■□□□□ 0.76
CHTOP-203ENST00000368690 PUF60Q9UHX1 559 aaKnown RBP19.79■□□□□ 0.76
CHTOP-203ENST00000368690 LOC102724428A0A0B4J2F2 783 aa19.78■□□□□ 0.76
CHTOP-203ENST00000368690 CTAGE15A4D2H0 777 aa19.78■□□□□ 0.76
CHTOP-203ENST00000368690 SH2B2O14492 632 aaPredicted RBP19.78■□□□□ 0.76
CHTOP-203ENST00000368690 CTAGE8P0CG41 777 aa19.78■□□□□ 0.76
CHTOP-203ENST00000368690 SIK1P57059 783 aa19.78■□□□□ 0.76
CHTOP-203ENST00000368690 TRDNQ13061 729 aa19.78■□□□□ 0.76
CHTOP-203ENST00000368690 KIF4BQ2VIQ3 1234 aa19.78■□□□□ 0.76
CHTOP-203ENST00000368690 CTAGE6Q86UF2 777 aa19.78■□□□□ 0.76
CHTOP-203ENST00000368690 CTAGE4Q8IX94 777 aa19.78■□□□□ 0.76
CHTOP-203ENST00000368690 PLCD3Q8N3E9 789 aa19.78■□□□□ 0.76
CHTOP-203ENST00000368690 LZTFL1Q9NQ48 299 aa19.78■□□□□ 0.76
CHTOP-203ENST00000368690 ITIH6Q6UXX5 1313 aa19.78■□□□□ 0.76
CHTOP-203ENST00000368690 FOXN1O15353 648 aa19.78■□□□□ 0.76
CHTOP-203ENST00000368690 CYP19A1P11511 503 aaPredicted RBP19.78■□□□□ 0.76
CHTOP-203ENST00000368690 AARSP49588 968 aaKnown RBP eCLIP19.78■□□□□ 0.76
CHTOP-203ENST00000368690 CORO7P57737 925 aa19.78■□□□□ 0.76
CHTOP-203ENST00000368690 ZNF569Q5MCW4 686 aa19.78■□□□□ 0.76
CHTOP-203ENST00000368690 CTCFLQ8NI51 663 aaPredicted RBP19.78■□□□□ 0.76
CHTOP-203ENST00000368690 ZSWIM4Q9H7M6 989 aa19.78■□□□□ 0.76
CHTOP-203ENST00000368690 MFAP3LO75121 409 aa19.77■□□□□ 0.76
CHTOP-203ENST00000368690 IRX3P78415 501 aaPredicted RBP19.77■□□□□ 0.76
CHTOP-203ENST00000368690 MAPK8IP2Q13387 824 aaPredicted RBP19.77■□□□□ 0.76
CHTOP-203ENST00000368690 WASHC4Q2M389 1173 aa19.77■□□□□ 0.76
CHTOP-203ENST00000368690 TTC31Q49AM3 519 aaPredicted RBP19.77■□□□□ 0.76
CHTOP-203ENST00000368690 APOA5Q6Q788 366 aa19.77■□□□□ 0.76
CHTOP-203ENST00000368690 PTF1AQ7RTS3 328 aa19.77■□□□□ 0.76
CHTOP-203ENST00000368690 CNGA4Q8IV77 575 aa19.77■□□□□ 0.76
CHTOP-203ENST00000368690 STK11IPQ8N1F8 1099 aa19.77■□□□□ 0.76
CHTOP-203ENST00000368690 PPM1EQ8WY54 764 aa19.77■□□□□ 0.76
CHTOP-203ENST00000368690 TMEM87BQ96K49 555 aa19.77■□□□□ 0.76
CHTOP-203ENST00000368690 MED15Q96RN5 788 aa19.77■□□□□ 0.76
CHTOP-203ENST00000368690 NAPGQ99747 312 aaPredicted RBP19.77■□□□□ 0.76
CHTOP-203ENST00000368690 SAMSN1Q9NSI8 373 aaKnown RBP19.77■□□□□ 0.76
CHTOP-203ENST00000368690 FBXO3Q9UK99 471 aa19.77■□□□□ 0.76
CHTOP-203ENST00000368690 AKAP2Q9Y2D5 859 aa19.77■□□□□ 0.76
CHTOP-203ENST00000368690 EIF3CLB5ME19 914 aaKnown RBP19.77■□□□□ 0.75
CHTOP-203ENST00000368690 VSNL1P62760 191 aa19.77■□□□□ 0.75
CHTOP-203ENST00000368690 NTRK3Q16288 839 aa19.77■□□□□ 0.75
CHTOP-203ENST00000368690 SPATA1Q5VX52 437 aa19.77■□□□□ 0.75
CHTOP-203ENST00000368690 KIF6Q6ZMV9 814 aa19.77■□□□□ 0.75
CHTOP-203ENST00000368690 NOSTRINQ8IVI9 506 aa19.77■□□□□ 0.75
CHTOP-203ENST00000368690 IGSF22Q8N9C0 903 aa19.77■□□□□ 0.75
CHTOP-203ENST00000368690 WASF1Q92558 559 aa19.77■□□□□ 0.75
CHTOP-203ENST00000368690 SMARCC1Q92922 1105 aaPredicted RBP19.77■□□□□ 0.75
CHTOP-203ENST00000368690 EIF3CQ99613 913 aaKnown RBP19.77■□□□□ 0.75
CHTOP-203ENST00000368690 FBXO2Q9UK22 296 aaPredicted RBP19.77■□□□□ 0.75
CHTOP-203ENST00000368690 ZBTB1Q9Y2K1 713 aa19.77■□□□□ 0.75
CHTOP-203ENST00000368690 TJP1Q07157 1748 aa19.77■□□□□ 0.75
CHTOP-203ENST00000368690 EP400Q96L91 3159 aa19.76■□□□□ 0.75
CHTOP-203ENST00000368690 N4BP1O75113 896 aaKnown RBP19.76■□□□□ 0.75
CHTOP-203ENST00000368690 CPP00450 1065 aa19.76■□□□□ 0.75
CHTOP-203ENST00000368690 MCM3P25205 808 aa19.76■□□□□ 0.75
CHTOP-203ENST00000368690 IARSP41252 1262 aaKnown RBP19.76■□□□□ 0.75
CHTOP-203ENST00000368690 RBL2Q08999 1139 aa19.76■□□□□ 0.75
CHTOP-203ENST00000368690 RAB11FIP4Q86YS3 637 aa19.76■□□□□ 0.75
CHTOP-203ENST00000368690 ADD3Q9UEY8 706 aaKnown RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms