RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 KIF24Q5T7B8 1368 aa4.53□□□□□ -1.68
SMC1B-201ENST00000357450 CCNA1P78396 465 aa4.53□□□□□ -1.68
SMC1B-201ENST00000357450 KIAA2012Q0VF49 1180 aa4.53□□□□□ -1.68
SMC1B-201ENST00000357450 MAP3K11Q16584 847 aa4.53□□□□□ -1.68
SMC1B-201ENST00000357450 MAPKAPK5Q8IW41 473 aa4.53□□□□□ -1.68
SMC1B-201ENST00000357450 CD99L2Q8TCZ2 262 aa4.53□□□□□ -1.68
SMC1B-201ENST00000357450 STX8Q9UNK0 236 aa4.53□□□□□ -1.68
SMC1B-201ENST00000357450 LEMD3Q9Y2U8 911 aa4.53□□□□□ -1.68
SMC1B-201ENST00000357450 GNAI2P04899 355 aa4.52□□□□□ -1.69
SMC1B-201ENST00000357450 TRIM27P14373 513 aa4.52□□□□□ -1.69
SMC1B-201ENST00000357450 RPS12P25398 132 aaKnown RBP4.52□□□□□ -1.69
SMC1B-201ENST00000357450 PSMC4P43686 418 aa4.52□□□□□ -1.69
SMC1B-201ENST00000357450 C6orf132Q5T0Z8 1188 aa4.52□□□□□ -1.69
SMC1B-201ENST00000357450 ANO1Q5XXA6 986 aa4.52□□□□□ -1.69
SMC1B-201ENST00000357450 ZKSCAN2Q63HK3 967 aa4.52□□□□□ -1.69
SMC1B-201ENST00000357450 NACAP1Q9BZK3 213 aa4.52□□□□□ -1.69
SMC1B-201ENST00000357450 PHIPQ8WWQ0 1821 aa4.52□□□□□ -1.69
SMC1B-201ENST00000357450 MANSC4A6NHS7 340 aaPredicted RBP4.52□□□□□ -1.69
SMC1B-201ENST00000357450 PLCB2Q00722 1185 aa4.52□□□□□ -1.69
SMC1B-201ENST00000357450 TRDNQ13061 729 aa4.52□□□□□ -1.69
SMC1B-201ENST00000357450 PTGDRQ13258 359 aa4.52□□□□□ -1.69
SMC1B-201ENST00000357450 SNAPC2Q13487 334 aa4.52□□□□□ -1.69
SMC1B-201ENST00000357450 PKP1Q13835 747 aa4.52□□□□□ -1.69
SMC1B-201ENST00000357450 SPRYD3Q8NCJ5 442 aa4.52□□□□□ -1.69
SMC1B-201ENST00000357450 KCNB2Q92953 911 aa4.52□□□□□ -1.69
SMC1B-201ENST00000357450 FSD1Q9BTV5 496 aa4.52□□□□□ -1.69
SMC1B-201ENST00000357450 TBC1D2Q9BYX2 928 aa4.52□□□□□ -1.69
SMC1B-201ENST00000357450 AS3MTQ9HBK9 375 aa4.52□□□□□ -1.69
SMC1B-201ENST00000357450 MCM9Q9NXL9 1143 aa4.52□□□□□ -1.69
SMC1B-201ENST00000357450 ZHX1Q9UKY1 873 aaPredicted RBP4.52□□□□□ -1.69
SMC1B-201ENST00000357450 PNMA3Q9UL41 463 aa4.52□□□□□ -1.69
SMC1B-201ENST00000357450 BSNQ9UPA5 3926 aa4.52□□□□□ -1.69
SMC1B-201ENST00000357450 BCL9O00512 1426 aa4.52□□□□□ -1.69
SMC1B-201ENST00000357450 SPP2Q13103 211 aa4.52□□□□□ -1.69
SMC1B-201ENST00000357450 DIXDC1Q155Q3 683 aa4.52□□□□□ -1.69
SMC1B-201ENST00000357450 BRDTQ58F21 947 aaPredicted RBP4.52□□□□□ -1.69
SMC1B-201ENST00000357450 HSP90AB4PQ58FF6 505 aa4.52□□□□□ -1.69
SMC1B-201ENST00000357450 NFXL1Q6ZNB6 911 aa4.52□□□□□ -1.69
SMC1B-201ENST00000357450 PA2G4Q9UQ80 394 aaKnown RBP4.52□□□□□ -1.69
SMC1B-201ENST00000357450 MYH4Q9Y623 1939 aa4.52□□□□□ -1.69
SMC1B-201ENST00000357450 SLX4Q8IY92 1834 aa4.52□□□□□ -1.69
SMC1B-201ENST00000357450 MYO3BQ8WXR4 1341 aa4.52□□□□□ -1.69
SMC1B-201ENST00000357450 FAM196BA6NMK8 535 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 VAMP4O75379 141 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 TM4SF1P30408 202 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 MAP2K2P36507 400 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 TIMM10P62072 90 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 SP4Q02446 784 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 TSR1Q2NL82 804 aaKnown RBP4.51□□□□□ -1.69
SMC1B-201ENST00000357450 KCNQ5Q9NR82 932 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 GINS2Q9Y248 185 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 ATP11BQ9Y2G3 1177 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 SHTN1A0MZ66 631 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 ERICH2A1L162 156 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 RANBP6O60518 1105 aaKnown RBP4.51□□□□□ -1.69
SMC1B-201ENST00000357450 PCCAP05165 728 aaPredicted RBP4.51□□□□□ -1.69
SMC1B-201ENST00000357450 CETPP11597 493 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 FCGRTP55899 365 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 MAP3K9P80192 1104 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 SPOUT1Q5T280 376 aaKnown RBP4.51□□□□□ -1.69
SMC1B-201ENST00000357450 NSMFQ6X4W1 530 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 G2E3Q7L622 706 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 AATFQ9NY61 560 aaKnown RBP eCLIP4.51□□□□□ -1.69
SMC1B-201ENST00000357450 CNPY2Q9Y2B0 182 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 SDK1Q7Z5N4 2213 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 HSP90AA1P07900 732 aaKnown RBP4.51□□□□□ -1.69
SMC1B-201ENST00000357450 DEKP35659 375 aaKnown RBP4.51□□□□□ -1.69
SMC1B-201ENST00000357450 GNL2Q13823 731 aaKnown RBP4.51□□□□□ -1.69
SMC1B-201ENST00000357450 TTC16Q8NEE8 873 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 SH3TC2Q8TF17 1288 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 ZKSCAN4Q969J2 545 aaPredicted RBP4.51□□□□□ -1.69
SMC1B-201ENST00000357450 OPTNQ96CV9 577 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 TRIM47Q96LD4 638 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 FTOQ9C0B1 505 aaKnown RBP eCLIP4.51□□□□□ -1.69
SMC1B-201ENST00000357450 VAT1LQ9HCJ6 419 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 CD209Q9NNX6 404 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 DIAPH3Q9NSV4 1193 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 COG6Q9Y2V7 657 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 ASPMQ8IZT6 3477 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 GPR25O00155 361 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 MAP4K4O95819 1239 aaPredicted RBP4.51□□□□□ -1.69
SMC1B-201ENST00000357450 CRKP46108 304 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 AKAP17AQ02040 695 aaKnown RBP4.51□□□□□ -1.69
SMC1B-201ENST00000357450 PTPN12Q05209 780 aaKnown RBP4.51□□□□□ -1.69
SMC1B-201ENST00000357450 PROX2Q3B8N5 592 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 NBPF12Q5TAG4 269 aaPredicted RBP4.51□□□□□ -1.69
SMC1B-201ENST00000357450 CASC1Q6TDU7 716 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 CCDC84Q86UT8 332 aaPredicted RBP4.51□□□□□ -1.69
SMC1B-201ENST00000357450 DHX37Q8IY37 1157 aaKnown RBP4.51□□□□□ -1.69
SMC1B-201ENST00000357450 TGFBRAP1Q8WUH2 860 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 FERMT2Q96AC1 680 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 DEFB118Q96PH6 123 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 PARK7Q99497 189 aaKnown RBP4.51□□□□□ -1.69
SMC1B-201ENST00000357450 ZNF341Q9BYN7 854 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 CRNKL1Q9BZJ0 848 aaKnown RBP4.51□□□□□ -1.69
SMC1B-201ENST00000357450 TMEM39BQ9GZU3 492 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 BRPF3Q9ULD4 1205 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 DENND2AQ9ULE3 1009 aa4.51□□□□□ -1.69
SMC1B-201ENST00000357450 NOB1Q9ULX3 412 aaKnown RBP4.51□□□□□ -1.69
SMC1B-201ENST00000357450 EXOC6BQ9Y2D4 811 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms