RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 PTPROQ16827 1216 aa6.71□□□□□ -1.34
CD47-201ENST00000355354 SCAND2PQ9GZW5 306 aaPredicted RBP6.71□□□□□ -1.34
CD47-201ENST00000355354 RNF14Q9UBS8 474 aa6.71□□□□□ -1.34
CD47-201ENST00000355354 POLEQ07864 2286 aa6.71□□□□□ -1.34
CD47-201ENST00000355354 RFX7Q2KHR2 1363 aa6.71□□□□□ -1.34
CD47-201ENST00000355354 NUP205Q92621 2012 aa6.71□□□□□ -1.34
CD47-201ENST00000355354 WDR33Q9C0J8 1336 aaKnown RBP6.71□□□□□ -1.34
CD47-201ENST00000355354 FOXO6A8MYZ6 492 aa6.71□□□□□ -1.34
CD47-201ENST00000355354 ZMYND10O75800 440 aa6.71□□□□□ -1.34
CD47-201ENST00000355354 IL17AQ16552 155 aa6.71□□□□□ -1.34
CD47-201ENST00000355354 FAM219BQ5XKK7 198 aa6.71□□□□□ -1.34
CD47-201ENST00000355354 MXD3Q9BW11 206 aa6.71□□□□□ -1.34
CD47-201ENST00000355354 SALL4Q9UJQ4 1053 aa6.71□□□□□ -1.34
CD47-201ENST00000355354 ZSCAN5CA6NGD5 496 aaPredicted RBP6.71□□□□□ -1.34
CD47-201ENST00000355354 YDJCA8MPS7 323 aa6.71□□□□□ -1.34
CD47-201ENST00000355354 STX6O43752 255 aa6.71□□□□□ -1.34
CD47-201ENST00000355354 SLFN14P0C7P3 912 aa6.71□□□□□ -1.34
CD47-201ENST00000355354 PMS1P54277 932 aaKnown RBP6.71□□□□□ -1.34
CD47-201ENST00000355354 HTRA3P83110 453 aa6.71□□□□□ -1.34
CD47-201ENST00000355354 ANO6Q4KMQ2 910 aa6.71□□□□□ -1.34
CD47-201ENST00000355354 AACSQ86V21 672 aa6.71□□□□□ -1.34
CD47-201ENST00000355354 A0A0G2JS52 829 aa6.7□□□□□ -1.34
CD47-201ENST00000355354 GOLIM4O00461 696 aa6.7□□□□□ -1.34
CD47-201ENST00000355354 EPHB6O15197 1021 aa6.7□□□□□ -1.34
CD47-201ENST00000355354 ZPR1O75312 459 aa6.7□□□□□ -1.34
CD47-201ENST00000355354 MCAMP43121 646 aa6.7□□□□□ -1.34
CD47-201ENST00000355354 HIRAP54198 1017 aaPredicted RBP6.7□□□□□ -1.34
CD47-201ENST00000355354 NOLC1Q14978 699 aaKnown RBP eCLIP6.7□□□□□ -1.346e-6■□□□□ 10.9
CD47-201ENST00000355354 TRIM65Q6PJ69 517 aa6.7□□□□□ -1.34
CD47-201ENST00000355354 DLK2Q6UY11 383 aa6.7□□□□□ -1.34
CD47-201ENST00000355354 FAM177A1Q8N128 213 aaPredicted RBP6.7□□□□□ -1.34
CD47-201ENST00000355354 GOLPH3Q9H4A6 298 aa6.7□□□□□ -1.34
CD47-201ENST00000355354 MYH7BA7E2Y1 1941 aa6.7□□□□□ -1.34
CD47-201ENST00000355354 ERC2O15083 957 aa6.7□□□□□ -1.34
CD47-201ENST00000355354 CDAN1Q8IWY9 1227 aa6.7□□□□□ -1.34
CD47-201ENST00000355354 SLC44A5Q8NCS7 719 aa6.7□□□□□ -1.34
CD47-201ENST00000355354 MED23Q9ULK4 1368 aa6.7□□□□□ -1.34
CD47-201ENST00000355354 ZANQ9Y493 2812 aa6.7□□□□□ -1.34
CD47-201ENST00000355354 CNOT1A5YKK6 2376 aaKnown RBP6.7□□□□□ -1.34
CD47-201ENST00000355354 COL11A1P12107 1806 aaPredicted RBP6.7□□□□□ -1.34
CD47-201ENST00000355354 LMOD1P29536 600 aaPredicted RBP6.7□□□□□ -1.34
CD47-201ENST00000355354 HSCBQ8IWL3 235 aa6.7□□□□□ -1.34
CD47-201ENST00000355354 LEO1Q8WVC0 666 aaPredicted RBP6.7□□□□□ -1.34
CD47-201ENST00000355354 MYD88Q99836 296 aa6.7□□□□□ -1.34
CD47-201ENST00000355354 LRRCC1Q9C099 1032 aa6.7□□□□□ -1.34
CD47-201ENST00000355354 MAST3O60307 1309 aa6.7□□□□□ -1.34
CD47-201ENST00000355354 GBF1Q92538 1859 aa6.7□□□□□ -1.34
CD47-201ENST00000355354 FGAP02671 866 aa6.7□□□□□ -1.34
CD47-201ENST00000355354 PHKA1P46020 1223 aa6.7□□□□□ -1.34
CD47-201ENST00000355354 GNAI1P63096 354 aa6.7□□□□□ -1.34
CD47-201ENST00000355354 NSUN7Q8NE18 718 aaKnown RBP6.7□□□□□ -1.34
CD47-201ENST00000355354 TAF1DQ9H5J8 278 aaPredicted RBP6.7□□□□□ -1.34
CD47-201ENST00000355354 ZSWIM6Q9HCJ5 1215 aa6.7□□□□□ -1.34
CD47-201ENST00000355354 KCNJ14Q9UNX9 436 aa6.7□□□□□ -1.34
CD47-201ENST00000355354 SPTBP11277 2137 aa6.69□□□□□ -1.34
CD47-201ENST00000355354 KLK7P49862 253 aa6.69□□□□□ -1.34
CD47-201ENST00000355354 CAP1Q01518 475 aa6.69□□□□□ -1.34
CD47-201ENST00000355354 FKBP4Q02790 459 aaKnown RBP eCLIP6.69□□□□□ -1.34
CD47-201ENST00000355354 GCKRQ14397 625 aa6.69□□□□□ -1.34
CD47-201ENST00000355354 SHC4Q6S5L8 630 aa6.69□□□□□ -1.34
CD47-201ENST00000355354 DHX40Q8IX18 779 aaKnown RBP6.69□□□□□ -1.34
CD47-201ENST00000355354 GREM2Q9H772 168 aa6.69□□□□□ -1.34
CD47-201ENST00000355354 RNF216Q9NWF9 866 aaPredicted RBP6.69□□□□□ -1.34
CD47-201ENST00000355354 NF1P21359 2839 aa6.69□□□□□ -1.34
CD47-201ENST00000355354 ZAP70P43403 619 aa6.69□□□□□ -1.34
CD47-201ENST00000355354 ATP2B2Q01814 1243 aa6.69□□□□□ -1.34
CD47-201ENST00000355354 RESTQ13127 1097 aa6.69□□□□□ -1.34
CD47-201ENST00000355354 CPNE8Q86YQ8 564 aa6.69□□□□□ -1.34
CD47-201ENST00000355354 HDAC7Q8WUI4 952 aa6.69□□□□□ -1.34
CD47-201ENST00000355354 SDR42E1Q8WUS8 393 aa6.69□□□□□ -1.34
CD47-201ENST00000355354 TELO2Q9Y4R8 837 aa6.69□□□□□ -1.34
CD47-201ENST00000355354 GNAT3A8MTJ3 354 aa6.69□□□□□ -1.34
CD47-201ENST00000355354 PPARAQ07869 468 aa6.69□□□□□ -1.34
CD47-201ENST00000355354 DALRD3Q5D0E6 543 aaKnown RBP6.69□□□□□ -1.34
CD47-201ENST00000355354 GSPT2Q8IYD1 628 aaKnown RBP6.69□□□□□ -1.34
CD47-201ENST00000355354 ARHGAP45Q92619 1136 aa6.69□□□□□ -1.34
CD47-201ENST00000355354 DNAJC2Q99543 621 aaKnown RBP6.69□□□□□ -1.34
CD47-201ENST00000355354 ISCA1Q9BUE6 129 aa6.69□□□□□ -1.34
CD47-201ENST00000355354 AFG3L2Q9Y4W6 797 aa6.69□□□□□ -1.34
CD47-201ENST00000355354 ZNF500O60304 480 aaPredicted RBP6.69□□□□□ -1.34
CD47-201ENST00000355354 PHF14O94880 888 aa6.69□□□□□ -1.34
CD47-201ENST00000355354 CDR1P51861 262 aa6.69□□□□□ -1.34
CD47-201ENST00000355354 GPR162Q16538 588 aa6.69□□□□□ -1.34
CD47-201ENST00000355354 GTF3C6Q969F1 213 aa6.69□□□□□ -1.34
CD47-201ENST00000355354 MAP3K15Q6ZN16 1313 aa6.69□□□□□ -1.34
CD47-201ENST00000355354 SVILO95425 2214 aa6.68□□□□□ -1.34
CD47-201ENST00000355354 F13A1P00488 732 aa6.68□□□□□ -1.34
CD47-201ENST00000355354 HSPA8P11142 646 aaKnown RBP6.68□□□□□ -1.34
CD47-201ENST00000355354 TRIM28Q13263 835 aaKnown RBP6.68□□□□□ -1.34
CD47-201ENST00000355354 SKIDA1Q1XH10 827 aa6.68□□□□□ -1.34
CD47-201ENST00000355354 RASGRP4Q8TDF6 673 aa6.68□□□□□ -1.34
CD47-201ENST00000355354 DNAAF4Q8WXU2 420 aa6.68□□□□□ -1.34
CD47-201ENST00000355354 CCDC171Q6TFL3 1326 aa6.68□□□□□ -1.34
CD47-201ENST00000355354 H3BQF6 201 aa6.68□□□□□ -1.34
CD47-201ENST00000355354 OS9Q13438 667 aaPredicted RBP6.68□□□□□ -1.34
CD47-201ENST00000355354 NTRK3Q16288 839 aa6.68□□□□□ -1.34
CD47-201ENST00000355354 NLRP3Q96P20 1036 aa6.68□□□□□ -1.34
CD47-201ENST00000355354 BACH1O14867 736 aa6.68□□□□□ -1.34
CD47-201ENST00000355354 HSP90AA1P07900 732 aaKnown RBP6.68□□□□□ -1.34
CD47-201ENST00000355354 Q6ZUG5 572 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms