RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 RTN1Q16799 776 aa20.2■□□□□ 0.82
APP-202ENST00000348990 TSR1Q2NL82 804 aaKnown RBP20.2■□□□□ 0.82
APP-202ENST00000348990 RILPL1Q5EBL4 403 aa20.2■□□□□ 0.82
APP-202ENST00000348990 KRT28Q7Z3Y7 464 aa20.2■□□□□ 0.82
APP-202ENST00000348990 ANKRD20A12PQ8NF67 263 aa20.2■□□□□ 0.82
APP-202ENST00000348990 SMARCC1Q92922 1105 aaPredicted RBP20.2■□□□□ 0.82
APP-202ENST00000348990 ABCC6O95255 1503 aa20.2■□□□□ 0.82
APP-202ENST00000348990 PTPREP23469 700 aa20.19■□□□□ 0.82
APP-202ENST00000348990 IRX3P78415 501 aaPredicted RBP20.19■□□□□ 0.82
APP-202ENST00000348990 SPATA1Q5VX52 437 aa20.19■□□□□ 0.82
APP-202ENST00000348990 TAB2Q9NYJ8 693 aa20.19■□□□□ 0.82
APP-202ENST00000348990 TTF2Q9UNY4 1162 aaKnown RBP20.19■□□□□ 0.82
APP-202ENST00000348990 ZNF532Q9HCE3 1301 aa20.19■□□□□ 0.82
APP-202ENST00000348990 KDM3BQ7LBC6 1761 aa20.19■□□□□ 0.82
APP-202ENST00000348990 A0A1B0GTH6 734 aa20.19■□□□□ 0.82
APP-202ENST00000348990 EIF3CLB5ME19 914 aaKnown RBP20.19■□□□□ 0.82
APP-202ENST00000348990 MFAP3LO75121 409 aa20.19■□□□□ 0.82
APP-202ENST00000348990 TOB1P50616 345 aaPredicted RBP20.19■□□□□ 0.82
APP-202ENST00000348990 CABLES1Q8TDN4 633 aa20.19■□□□□ 0.82
APP-202ENST00000348990 OXER1Q8TDS5 423 aa20.19■□□□□ 0.82
APP-202ENST00000348990 DCAF5Q96JK2 942 aa20.19■□□□□ 0.82
APP-202ENST00000348990 MED15Q96RN5 788 aa20.19■□□□□ 0.82
APP-202ENST00000348990 EIF3CQ99613 913 aaKnown RBP20.19■□□□□ 0.82
APP-202ENST00000348990 BLZF1Q9H2G9 400 aa20.19■□□□□ 0.82
APP-202ENST00000348990 WWC3Q9ULE0 1092 aa20.19■□□□□ 0.82
APP-202ENST00000348990 KRT9P35527 623 aa20.18■□□□□ 0.82
APP-202ENST00000348990 RRAGBQ5VZM2 374 aa20.18■□□□□ 0.82
APP-202ENST00000348990 NAA15Q9BXJ9 866 aaKnown RBP20.18■□□□□ 0.82
APP-202ENST00000348990 FBXO2Q9UK22 296 aaPredicted RBP20.18■□□□□ 0.82
APP-202ENST00000348990 MYO6Q9UM54 1294 aa20.18■□□□□ 0.82
APP-202ENST00000348990 CEP131Q9UPN4 1083 aa20.18■□□□□ 0.82
APP-202ENST00000348990 MED1Q15648 1581 aaPredicted RBP20.18■□□□□ 0.82
APP-202ENST00000348990 SART3Q15020 963 aaKnown RBP20.18■□□□□ 0.82
APP-202ENST00000348990 LRP10Q7Z4F1 713 aa20.18■□□□□ 0.82
APP-202ENST00000348990 TMEM87BQ96K49 555 aa20.18■□□□□ 0.82
APP-202ENST00000348990 DRC1Q96MC2 740 aa20.18■□□□□ 0.82
APP-202ENST00000348990 CRACR2AQ9BSW2 395 aa20.18■□□□□ 0.82
APP-202ENST00000348990 ZSWIM5Q9P217 1185 aa20.18■□□□□ 0.82
APP-202ENST00000348990 RNF40O75150 1001 aa20.18■□□□□ 0.82
APP-202ENST00000348990 GPTP24298 496 aa20.18■□□□□ 0.82
APP-202ENST00000348990 TDO2P48775 406 aa20.18■□□□□ 0.82
APP-202ENST00000348990 CTR9Q6PD62 1173 aa20.18■□□□□ 0.82
APP-202ENST00000348990 RIN2Q8WYP3 895 aaPredicted RBP20.18■□□□□ 0.82
APP-202ENST00000348990 CTAGE1Q96RT6 745 aa20.18■□□□□ 0.82
APP-202ENST00000348990 CPDO75976 1380 aa20.17■□□□□ 0.82
APP-202ENST00000348990 MMP1P03956 469 aa20.17■□□□□ 0.82
APP-202ENST00000348990 MCAMP43121 646 aa20.17■□□□□ 0.82
APP-202ENST00000348990 HELBQ8NG08 1087 aaPredicted RBP20.17■□□□□ 0.82
APP-202ENST00000348990 FAM71BQ8TC56 605 aa20.17■□□□□ 0.82
APP-202ENST00000348990 LRRIQ3A6PVS8 624 aaPredicted RBP20.17■□□□□ 0.82
APP-202ENST00000348990 RASSF8Q8NHQ8 419 aa20.17■□□□□ 0.82
APP-202ENST00000348990 HNRNPLLQ8WVV9 542 aaKnown RBP20.17■□□□□ 0.82
APP-202ENST00000348990 NBPF3Q9H094 633 aa20.17■□□□□ 0.82
APP-202ENST00000348990 HDAC6Q9UBN7 1215 aa20.17■□□□□ 0.82
APP-202ENST00000348990 TRIM10Q9UDY6 481 aa20.17■□□□□ 0.82
APP-202ENST00000348990 CYP27B1O15528 508 aa20.17■□□□□ 0.82
APP-202ENST00000348990 CD44P16070 742 aaKnown RBP20.17■□□□□ 0.82
APP-202ENST00000348990 ERCC5P28715 1186 aaPredicted RBP20.17■□□□□ 0.82
APP-202ENST00000348990 MICALL1Q8N3F8 863 aa20.17■□□□□ 0.82
APP-202ENST00000348990 AFAP1L1Q8TED9 768 aa20.17■□□□□ 0.82
APP-202ENST00000348990 EFCC1Q9HA90 598 aa20.17■□□□□ 0.82
APP-202ENST00000348990 MFSD6Q6ZSS7 791 aa20.16■□□□□ 0.82
APP-202ENST00000348990 LY9Q9HBG7 655 aa20.16■□□□□ 0.82
APP-202ENST00000348990 FAM205CA6NFA0 338 aa20.16■□□□□ 0.82
APP-202ENST00000348990 TRIM75PA6NK02 468 aa20.16■□□□□ 0.82
APP-202ENST00000348990 SRGAP2O75044 1071 aa20.16■□□□□ 0.82
APP-202ENST00000348990 WTAPQ15007 396 aa20.16■□□□□ 0.82
APP-202ENST00000348990 TMTC1Q8IUR5 882 aa20.16■□□□□ 0.82
APP-202ENST00000348990 TRIML1Q8N9V2 468 aa20.16■□□□□ 0.82
APP-202ENST00000348990 TFR2Q9UP52 801 aa20.16■□□□□ 0.82
APP-202ENST00000348990 UBR1Q8IWV7 1749 aa20.15■□□□□ 0.82
APP-202ENST00000348990 ZNF174Q15697 407 aa20.15■□□□□ 0.82
APP-202ENST00000348990 NTRK3Q16288 839 aa20.15■□□□□ 0.82
APP-202ENST00000348990 WHAMMP3Q1A5X7 153 aa20.15■□□□□ 0.82
APP-202ENST00000348990 SYNE4Q8N205 404 aa20.15■□□□□ 0.82
APP-202ENST00000348990 IGDCC4Q8TDY8 1250 aa20.15■□□□□ 0.82
APP-202ENST00000348990 GYPCP04921 128 aa20.15■□□□□ 0.82
APP-202ENST00000348990 RASGRP2Q7LDG7 609 aa20.15■□□□□ 0.82
APP-202ENST00000348990 PCMTD1Q96MG8 357 aaPredicted RBP20.15■□□□□ 0.82
APP-202ENST00000348990 CIAO1O76071 339 aa20.15■□□□□ 0.82
APP-202ENST00000348990 ADD2P35612 726 aa20.15■□□□□ 0.82
APP-202ENST00000348990 KIAA1328Q86T90 577 aa20.15■□□□□ 0.82
APP-202ENST00000348990 GSPT2Q8IYD1 628 aaKnown RBP20.15■□□□□ 0.82
APP-202ENST00000348990 MSANTD4Q8NCY6 345 aa20.15■□□□□ 0.82
APP-202ENST00000348990 PIH1D3Q9NQM4 214 aaKnown RBP20.15■□□□□ 0.82
APP-202ENST00000348990 ADD3Q9UEY8 706 aaKnown RBP20.15■□□□□ 0.82
APP-202ENST00000348990 FAM237AA0A1B0GTK4 181 aa20.14■□□□□ 0.82
APP-202ENST00000348990 UBXN1Q04323 297 aa20.14■□□□□ 0.82
APP-202ENST00000348990 CYP26C1Q6V0L0 522 aa20.14■□□□□ 0.82
APP-202ENST00000348990 ARMT1Q9H993 441 aa20.14■□□□□ 0.82
APP-202ENST00000348990 FAM217BQ9NTX9 383 aaPredicted RBP20.14■□□□□ 0.82
APP-202ENST00000348990 VPS54Q9P1Q0 977 aa20.14■□□□□ 0.82
APP-202ENST00000348990 RAB21Q9UL25 225 aa20.14■□□□□ 0.82
APP-202ENST00000348990 MRC1P22897 1456 aa20.14■□□□□ 0.81
APP-202ENST00000348990 LAMA4Q16363 1823 aa20.14■□□□□ 0.81
APP-202ENST00000348990 MBD4O95243 580 aa20.14■□□□□ 0.81
APP-202ENST00000348990 FMNL1O95466 1100 aaPredicted RBP20.14■□□□□ 0.81
APP-202ENST00000348990 DNAJC21Q5F1R6 531 aaKnown RBP20.14■□□□□ 0.81
APP-202ENST00000348990 LRRC31Q6UY01 552 aa20.14■□□□□ 0.81
APP-202ENST00000348990 MKRN1Q9UHC7 482 aaKnown RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms