RNA–Protein interactions for RNA: ENST00000347048.8

PTPA-202, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-202ENST00000347048 DOT1LQ8TEK3 1739 aa27.71■■■□□ 2.03
PTPA-202ENST00000347048 POLR2DO15514 142 aaKnown RBP27.71■■■□□ 2.03
PTPA-202ENST00000347048 ZNF18P17022 549 aa27.71■■■□□ 2.03
PTPA-202ENST00000347048 ESR2Q92731 530 aa27.71■■■□□ 2.03
PTPA-202ENST00000347048 ZKSCAN3Q9BRR0 538 aa27.71■■■□□ 2.03
PTPA-202ENST00000347048 SERTAD1Q9UHV2 236 aa27.71■■■□□ 2.03
PTPA-202ENST00000347048 FBXO38Q6PIJ6 1188 aa27.7■■■□□ 2.03
PTPA-202ENST00000347048 FOXN1O15353 648 aa27.69■■■□□ 2.02
PTPA-202ENST00000347048 INTS5Q6P9B9 1019 aaKnown RBP27.69■■■□□ 2.02
PTPA-202ENST00000347048 CDC5LQ99459 802 aaKnown RBP27.69■■■□□ 2.02
PTPA-202ENST00000347048 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.69■■■□□ 2.02
PTPA-202ENST00000347048 PCDHB6Q9Y5E3 794 aa27.69■■■□□ 2.02
PTPA-202ENST00000347048 V9GYY5 206 aaPredicted RBP27.69■■■□□ 2.02
PTPA-202ENST00000347048 TMEM232C9JQI7 657 aa27.69■■■□□ 2.02
PTPA-202ENST00000347048 SEC23AQ15436 765 aa27.69■■■□□ 2.02
PTPA-202ENST00000347048 SPATA20Q8TB22 786 aa27.69■■■□□ 2.02
PTPA-202ENST00000347048 FBXO41Q8TF61 875 aa27.69■■■□□ 2.02
PTPA-202ENST00000347048 INTS13Q9NVM9 706 aa27.69■■■□□ 2.02
PTPA-202ENST00000347048 BCL9LQ86UU0 1499 aa27.68■■■□□ 2.02
PTPA-202ENST00000347048 SNAP23O00161 211 aa27.68■■■□□ 2.02
PTPA-202ENST00000347048 ACTN4O43707 911 aaKnown RBP27.68■■■□□ 2.02
PTPA-202ENST00000347048 BMP15O95972 392 aa27.68■■■□□ 2.02
PTPA-202ENST00000347048 ERCC5P28715 1186 aaPredicted RBP27.68■■■□□ 2.02
PTPA-202ENST00000347048 AKAP17AQ02040 695 aaKnown RBP27.68■■■□□ 2.02
PTPA-202ENST00000347048 SPECC1Q5M775 1068 aa27.68■■■□□ 2.02
PTPA-202ENST00000347048 TMEM139Q8IV31 216 aa27.68■■■□□ 2.02
PTPA-202ENST00000347048 REXO1L1PQ8IX06 675 aa27.68■■■□□ 2.02
PTPA-202ENST00000347048 KRT222Q8N1A0 295 aa27.68■■■□□ 2.02
PTPA-202ENST00000347048 NUP133Q8WUM0 1156 aa27.68■■■□□ 2.02
PTPA-202ENST00000347048 FAM53CQ9NYF3 392 aa27.68■■■□□ 2.02
PTPA-202ENST00000347048 CYP7A1P22680 504 aa27.68■■■□□ 2.02
PTPA-202ENST00000347048 GRIN1Q05586 938 aa27.68■■■□□ 2.02
PTPA-202ENST00000347048 TRIM65Q6PJ69 517 aa27.68■■■□□ 2.02
PTPA-202ENST00000347048 MIGA1Q8NAN2 632 aa27.68■■■□□ 2.02
PTPA-202ENST00000347048 AATFQ9NY61 560 aaKnown RBP eCLIP27.68■■■□□ 2.02
PTPA-202ENST00000347048 NFE2L3Q9Y4A8 694 aa27.68■■■□□ 2.02
PTPA-202ENST00000347048 CICQ96RK0 1608 aaPredicted RBP27.67■■■□□ 2.02
PTPA-202ENST00000347048 STX10O60499 249 aa27.67■■■□□ 2.02
PTPA-202ENST00000347048 CAMTA2O94983 1202 aa27.67■■■□□ 2.02
PTPA-202ENST00000347048 PCP11498 1178 aaKnown RBP27.67■■■□□ 2.02
PTPA-202ENST00000347048 H2AFXP16104 143 aaPredicted RBP27.67■■■□□ 2.02
PTPA-202ENST00000347048 CHRNDQ07001 517 aa27.67■■■□□ 2.02
PTPA-202ENST00000347048 NR5A1Q13285 461 aa27.67■■■□□ 2.02
PTPA-202ENST00000347048 SPECC1LQ69YQ0 1117 aa27.67■■■□□ 2.02
PTPA-202ENST00000347048 DNAI1Q9UI46 699 aa27.67■■■□□ 2.02
PTPA-202ENST00000347048 ZNF804BA4D1E1 1349 aa27.67■■■□□ 2.02
PTPA-202ENST00000347048 MYH6P13533 1939 aa27.66■■■□□ 2.02
PTPA-202ENST00000347048 MAGEB6P1A0A0J9YX57 407 aa27.66■■■□□ 2.02
PTPA-202ENST00000347048 KIF20AO95235 890 aa27.66■■■□□ 2.02
PTPA-202ENST00000347048 PRR29P0C7W0 189 aa27.66■■■□□ 2.02
PTPA-202ENST00000347048 CDK11BP21127 795 aaKnown RBP27.66■■■□□ 2.02
PTPA-202ENST00000347048 PLCD1P51178 756 aa27.66■■■□□ 2.02
PTPA-202ENST00000347048 GNL3LQ9NVN8 582 aaKnown RBP27.66■■■□□ 2.02
PTPA-202ENST00000347048 TNKSO95271 1327 aa27.66■■■□□ 2.02
PTPA-202ENST00000347048 TRIM75PA6NK02 468 aa27.66■■■□□ 2.02
PTPA-202ENST00000347048 NTSR2O95665 410 aa27.66■■■□□ 2.02
PTPA-202ENST00000347048 BAG1Q99933 345 aaPredicted RBP27.66■■■□□ 2.02
PTPA-202ENST00000347048 CDCA7Q9BWT1 371 aaPredicted RBP27.66■■■□□ 2.02
PTPA-202ENST00000347048 RBM28Q9NW13 759 aaKnown RBP27.66■■■□□ 2.02
PTPA-202ENST00000347048 CABP5Q9NP86 173 aa27.65■■■□□ 2.02
PTPA-202ENST00000347048 PRPF3O43395 683 aaKnown RBP27.64■■■□□ 2.02
PTPA-202ENST00000347048 FMR1Q06787 632 aaKnown RBP eCLIP27.64■■■□□ 2.02
PTPA-202ENST00000347048 CSRNP2Q9H175 543 aa27.64■■■□□ 2.02
PTPA-202ENST00000347048 PPP2R2CQ9Y2T4 447 aa27.64■■■□□ 2.02
PTPA-202ENST00000347048 CALM1P0DP23 149 aa27.64■■■□□ 2.01
PTPA-202ENST00000347048 CALM2P0DP24 149 aa27.64■■■□□ 2.01
PTPA-202ENST00000347048 CALM3P0DP25 149 aa27.64■■■□□ 2.01
PTPA-202ENST00000347048 KRT2P35908 639 aa27.64■■■□□ 2.01
PTPA-202ENST00000347048 CRKLP46109 303 aaKnown RBP27.64■■■□□ 2.01
PTPA-202ENST00000347048 CCDC82Q8N4S0 544 aa27.64■■■□□ 2.01
PTPA-202ENST00000347048 OXER1Q8TDS5 423 aa27.64■■■□□ 2.01
PTPA-202ENST00000347048 PHF20Q9BVI0 1012 aa27.64■■■□□ 2.01
PTPA-202ENST00000347048 DUOX1Q9NRD9 1551 aa27.64■■■□□ 2.01
PTPA-202ENST00000347048 ERCC6LQ2NKX8 1250 aa27.63■■■□□ 2.01
PTPA-202ENST00000347048 FERMT2Q96AC1 680 aa27.63■■■□□ 2.01
PTPA-202ENST00000347048 KAT6BQ8WYB5 2073 aa27.62■■■□□ 2.01
PTPA-202ENST00000347048 MINDY4BA8MYZ0 360 aa27.62■■■□□ 2.01
PTPA-202ENST00000347048 CMTR1Q8N1G2 835 aaKnown RBP27.62■■■□□ 2.01
PTPA-202ENST00000347048 ZSCAN10Q96SZ4 725 aaPredicted RBP27.62■■■□□ 2.01
PTPA-202ENST00000347048 BRIP1Q9BX63 1249 aa27.62■■■□□ 2.01
PTPA-202ENST00000347048 TPM1P09493 284 aa27.62■■■□□ 2.01
PTPA-202ENST00000347048 CATIPQ7Z7H3 387 aa27.62■■■□□ 2.01
PTPA-202ENST00000347048 TC2NQ8N9U0 490 aa27.62■■■□□ 2.01
PTPA-202ENST00000347048 BRMS1Q9HCU9 246 aa27.62■■■□□ 2.01
PTPA-202ENST00000347048 RAI14Q9P0K7 980 aa27.62■■■□□ 2.01
PTPA-202ENST00000347048 NIP7Q9Y221 180 aaKnown RBP eCLIP27.62■■■□□ 2.01
PTPA-202ENST00000347048 DLEC1Q9Y238 1755 aa27.61■■■□□ 2.01
PTPA-202ENST00000347048 RIOK1Q9BRS2 568 aaKnown RBP27.61■■■□□ 2.01
PTPA-202ENST00000347048 VWA3AA6NCI4 1184 aa27.6■■■□□ 2.01
PTPA-202ENST00000347048 SLFN14P0C7P3 912 aa27.6■■■□□ 2.01
PTPA-202ENST00000347048 PKN1Q16512 942 aa27.6■■■□□ 2.01
PTPA-202ENST00000347048 ADGRA1Q86SQ6 560 aa27.6■■■□□ 2.01
PTPA-202ENST00000347048 ENAHQ8N8S7 591 aaPredicted RBP27.6■■■□□ 2.01
PTPA-202ENST00000347048 SDR42E1Q8WUS8 393 aa27.6■■■□□ 2.01
PTPA-202ENST00000347048 BCL11BQ9C0K0 894 aaPredicted RBP27.6■■■□□ 2.01
PTPA-202ENST00000347048 SPATA31A6Q5VVP1 1343 aa27.6■■■□□ 2.01
PTPA-202ENST00000347048 A0A1B0GTH6 734 aa27.6■■■□□ 2.01
PTPA-202ENST00000347048 FGRP09769 529 aa27.6■■■□□ 2.01
PTPA-202ENST00000347048 ATP6V1AP38606 617 aa27.6■■■□□ 2.01
PTPA-202ENST00000347048 FUT2Q10981 343 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms