RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 TSPY8P0CW00 308 aa17.29■□□□□ 0.36
CDK5RAP3-201ENST00000338399 RXRAP19793 462 aa17.29■□□□□ 0.36
CDK5RAP3-201ENST00000338399 NT5C2P49902 561 aa17.29■□□□□ 0.36
CDK5RAP3-201ENST00000338399 MMP14P50281 582 aa17.29■□□□□ 0.36
CDK5RAP3-201ENST00000338399 NBPF9Q3BBW0 867 aa17.29■□□□□ 0.36
CDK5RAP3-201ENST00000338399 RBM26Q5T8P6 1007 aaKnown RBP17.29■□□□□ 0.36
CDK5RAP3-201ENST00000338399 SH3BP5LQ7L8J4 393 aa17.29■□□□□ 0.36
CDK5RAP3-201ENST00000338399 MICU3Q86XE3 530 aa17.29■□□□□ 0.36
CDK5RAP3-201ENST00000338399 MICALL2Q8IY33 904 aa17.29■□□□□ 0.36
CDK5RAP3-201ENST00000338399 MYL10Q9BUA6 226 aa17.29■□□□□ 0.36
CDK5RAP3-201ENST00000338399 CNOT7Q9UIV1 285 aaKnown RBP17.29■□□□□ 0.36
CDK5RAP3-201ENST00000338399 ZBTB43O43298 467 aa17.28■□□□□ 0.36
CDK5RAP3-201ENST00000338399 JAK2O60674 1132 aa17.28■□□□□ 0.36
CDK5RAP3-201ENST00000338399 CTDNEP1O95476 244 aa17.28■□□□□ 0.36
CDK5RAP3-201ENST00000338399 METAP2P50579 478 aaKnown RBP eCLIP17.28■□□□□ 0.36
CDK5RAP3-201ENST00000338399 NUCB2P80303 420 aa17.28■□□□□ 0.36
CDK5RAP3-201ENST00000338399 RAB3GAP1Q15042 981 aa17.28■□□□□ 0.36
CDK5RAP3-201ENST00000338399 IFIT1BQ5T764 474 aaKnown RBP17.28■□□□□ 0.36
CDK5RAP3-201ENST00000338399 SYNE3Q6ZMZ3 975 aa17.28■□□□□ 0.36
CDK5RAP3-201ENST00000338399 VEZTQ9HBM0 779 aa17.28■□□□□ 0.36
CDK5RAP3-201ENST00000338399 RNF181Q9P0P0 153 aa17.28■□□□□ 0.36
CDK5RAP3-201ENST00000338399 MYO1BO43795 1136 aa17.27■□□□□ 0.36
CDK5RAP3-201ENST00000338399 EGFRP00533 1210 aa17.27■□□□□ 0.36
CDK5RAP3-201ENST00000338399 SLURP2P0DP57 97 aa17.27■□□□□ 0.36
CDK5RAP3-201ENST00000338399 CCDC144CPQ8IYA2 1237 aa17.27■□□□□ 0.36
CDK5RAP3-201ENST00000338399 LLPHQ9BRT6 129 aaKnown RBP17.27■□□□□ 0.36
CDK5RAP3-201ENST00000338399 IL17RBQ9NRM6 502 aa17.27■□□□□ 0.36
CDK5RAP3-201ENST00000338399 SAMD7Q7Z3H4 446 aa17.27■□□□□ 0.35
CDK5RAP3-201ENST00000338399 ZNF654Q8IZM8 581 aa17.27■□□□□ 0.35
CDK5RAP3-201ENST00000338399 NSUN7Q8NE18 718 aaKnown RBP17.27■□□□□ 0.35
CDK5RAP3-201ENST00000338399 CHMP4CQ96CF2 233 aa17.27■□□□□ 0.35
CDK5RAP3-201ENST00000338399 EHD4Q9H223 541 aa17.27■□□□□ 0.35
CDK5RAP3-201ENST00000338399 PI4KBQ9UBF8 816 aa17.27■□□□□ 0.35
CDK5RAP3-201ENST00000338399 SWAP70Q9UH65 585 aa17.27■□□□□ 0.35
CDK5RAP3-201ENST00000338399 GOLGA8AA7E2F4 631 aa17.26■□□□□ 0.35
CDK5RAP3-201ENST00000338399 GPR162Q16538 588 aa17.26■□□□□ 0.35
CDK5RAP3-201ENST00000338399 GPC2Q8N158 579 aa17.26■□□□□ 0.35
CDK5RAP3-201ENST00000338399 CRACR2BQ8N4Y2 399 aaPredicted RBP17.26■□□□□ 0.35
CDK5RAP3-201ENST00000338399 SMARCC2Q8TAQ2 1214 aa17.26■□□□□ 0.35
CDK5RAP3-201ENST00000338399 DDX11Q96FC9 970 aa17.26■□□□□ 0.35
CDK5RAP3-201ENST00000338399 TCP11L1Q9NUJ3 509 aa17.26■□□□□ 0.35
CDK5RAP3-201ENST00000338399 ATRNL1Q5VV63 1379 aa17.25■□□□□ 0.35
CDK5RAP3-201ENST00000338399 PTPDC1A2A3K4 754 aa17.25■□□□□ 0.35
CDK5RAP3-201ENST00000338399 DHX16O60231 1041 aaKnown RBP17.25■□□□□ 0.35
CDK5RAP3-201ENST00000338399 PPFIA3O75145 1194 aa17.25■□□□□ 0.35
CDK5RAP3-201ENST00000338399 CDC27P30260 824 aa17.25■□□□□ 0.35
CDK5RAP3-201ENST00000338399 SHMT1P34896 483 aa17.25■□□□□ 0.35
CDK5RAP3-201ENST00000338399 TBC1D10BQ4KMP7 808 aaPredicted RBP17.25■□□□□ 0.35
CDK5RAP3-201ENST00000338399 RCSD1Q6JBY9 416 aa17.25■□□□□ 0.35
CDK5RAP3-201ENST00000338399 NEDD1Q8NHV4 660 aa17.25■□□□□ 0.35
CDK5RAP3-201ENST00000338399 ZDHHC9Q9Y397 364 aa17.25■□□□□ 0.35
CDK5RAP3-201ENST00000338399 COL2A1P02458 1487 aaPredicted RBP17.25■□□□□ 0.35
CDK5RAP3-201ENST00000338399 CNTNAP1P78357 1384 aa17.25■□□□□ 0.35
CDK5RAP3-201ENST00000338399 FAM196BA6NMK8 535 aa17.24■□□□□ 0.35
CDK5RAP3-201ENST00000338399 CPLX1O14810 134 aa17.24■□□□□ 0.35
CDK5RAP3-201ENST00000338399 SYT1P21579 422 aa17.24■□□□□ 0.35
CDK5RAP3-201ENST00000338399 ADD1P35611 737 aaKnown RBP17.24■□□□□ 0.35
CDK5RAP3-201ENST00000338399 CCDC178Q5BJE1 867 aa17.24■□□□□ 0.35
CDK5RAP3-201ENST00000338399 FKBP1CQ5VVH2 108 aa17.24■□□□□ 0.35
CDK5RAP3-201ENST00000338399 C9orf131Q5VYM1 1079 aa17.24■□□□□ 0.35
CDK5RAP3-201ENST00000338399 FOXP4Q8IVH2 680 aaPredicted RBP17.24■□□□□ 0.35
CDK5RAP3-201ENST00000338399 NUP133Q8WUM0 1156 aa17.24■□□□□ 0.35
CDK5RAP3-201ENST00000338399 FAM151AQ8WW52 585 aa17.24■□□□□ 0.35
CDK5RAP3-201ENST00000338399 TNPO1Q92973 898 aaKnown RBP17.24■□□□□ 0.35
CDK5RAP3-201ENST00000338399 DNAJC18Q9H819 358 aa17.24■□□□□ 0.35
CDK5RAP3-201ENST00000338399 H7C1D1 291 aa17.24■□□□□ 0.35
CDK5RAP3-201ENST00000338399 AKR1B1P15121 316 aa17.24■□□□□ 0.35
CDK5RAP3-201ENST00000338399 FOXD4L5Q5VV16 416 aaPredicted RBP17.24■□□□□ 0.35
CDK5RAP3-201ENST00000338399 CATIPQ7Z7H3 387 aa17.24■□□□□ 0.35
CDK5RAP3-201ENST00000338399 DGKHQ86XP1 1220 aa17.24■□□□□ 0.35
CDK5RAP3-201ENST00000338399 FOXD4L4Q8WXT5 416 aaPredicted RBP17.24■□□□□ 0.35
CDK5RAP3-201ENST00000338399 CSRNP1Q96S65 589 aa17.24■□□□□ 0.35
CDK5RAP3-201ENST00000338399 TRIM34Q9BYJ4 488 aa17.24■□□□□ 0.35
CDK5RAP3-201ENST00000338399 FAM217BQ9NTX9 383 aaPredicted RBP17.24■□□□□ 0.35
CDK5RAP3-201ENST00000338399 BRD1O95696 1058 aa17.23■□□□□ 0.35
CDK5RAP3-201ENST00000338399 HMGN5P82970 282 aaKnown RBP17.23■□□□□ 0.35
CDK5RAP3-201ENST00000338399 KIF4BQ2VIQ3 1234 aa17.23■□□□□ 0.35
CDK5RAP3-201ENST00000338399 LARP1BQ659C4 914 aaKnown RBP17.23■□□□□ 0.35
CDK5RAP3-201ENST00000338399 GPRC5DQ9NZD1 345 aa17.23■□□□□ 0.35
CDK5RAP3-201ENST00000338399 NID2Q14112 1375 aa17.23■□□□□ 0.35
CDK5RAP3-201ENST00000338399 STX6O43752 255 aa17.22■□□□□ 0.35
CDK5RAP3-201ENST00000338399 DDNO94850 711 aaPredicted RBP17.22■□□□□ 0.35
CDK5RAP3-201ENST00000338399 RCAN1P53805 252 aa17.22■□□□□ 0.35
CDK5RAP3-201ENST00000338399 RTN1Q16799 776 aa17.22■□□□□ 0.35
CDK5RAP3-201ENST00000338399 FAM83AQ86UY5 434 aa17.22■□□□□ 0.35
CDK5RAP3-201ENST00000338399 FAM184AQ8NB25 1140 aa17.22■□□□□ 0.35
CDK5RAP3-201ENST00000338399 FANCBQ8NB91 859 aa17.22■□□□□ 0.35
CDK5RAP3-201ENST00000338399 ANKS1AQ92625 1134 aa17.22■□□□□ 0.35
CDK5RAP3-201ENST00000338399 TMEM39BQ9GZU3 492 aa17.22■□□□□ 0.35
CDK5RAP3-201ENST00000338399 KAT14Q9H8E8 782 aa17.22■□□□□ 0.35
CDK5RAP3-201ENST00000338399 STX8Q9UNK0 236 aa17.22■□□□□ 0.35
CDK5RAP3-201ENST00000338399 SCAF8Q9UPN6 1271 aaKnown RBP17.22■□□□□ 0.35
CDK5RAP3-201ENST00000338399 CEP95Q96GE4 821 aa17.22■□□□□ 0.35
CDK5RAP3-201ENST00000338399 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.22■□□□□ 0.35
CDK5RAP3-201ENST00000338399 ASTN2O75129 1339 aaPredicted RBP17.22■□□□□ 0.35
CDK5RAP3-201ENST00000338399 PLIN4Q96Q06 1357 aa17.21■□□□□ 0.35
CDK5RAP3-201ENST00000338399 SOCS7O14512 581 aa17.21■□□□□ 0.35
CDK5RAP3-201ENST00000338399 DDAH1O94760 285 aa17.21■□□□□ 0.35
CDK5RAP3-201ENST00000338399 TROAPQ12815 778 aa17.21■□□□□ 0.35
CDK5RAP3-201ENST00000338399 CPLX2Q6PUV4 134 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms