RNA–Protein interactions for RNA: ENST00000336937.8

ATF3-201, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best) BASIC

Gene ATF3, Length 482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-201ENST00000336937 SH3D19Q5HYK7 790 aa8.3□□□□□ -1.08
ATF3-201ENST00000336937 CTU1Q7Z7A3 348 aaKnown RBP8.3□□□□□ -1.08
ATF3-201ENST00000336937 LCORLQ8N3X6 602 aa8.3□□□□□ -1.08
ATF3-201ENST00000336937 LPAR1Q92633 364 aa8.3□□□□□ -1.08
ATF3-201ENST00000336937 LNPKQ9C0E8 428 aa8.3□□□□□ -1.08
ATF3-201ENST00000336937 TMOD4Q9NZQ9 345 aa8.3□□□□□ -1.08
ATF3-201ENST00000336937 PALD1Q9ULE6 856 aa8.3□□□□□ -1.08
ATF3-201ENST00000336937 ZBTB21Q9ULJ3 1066 aa8.3□□□□□ -1.08
ATF3-201ENST00000336937 NDUFB9Q9Y6M9 179 aa8.3□□□□□ -1.08
ATF3-201ENST00000336937 SLC4A4Q9Y6R1 1079 aa8.3□□□□□ -1.08
ATF3-201ENST00000336937 ZHX2Q9Y6X8 837 aa8.3□□□□□ -1.08
ATF3-201ENST00000336937 PLIN4Q96Q06 1357 aa8.3□□□□□ -1.08
ATF3-201ENST00000336937 GREB1LQ9C091 1923 aaPredicted RBP8.3□□□□□ -1.08
ATF3-201ENST00000336937 PATL2C9JE40 543 aaKnown RBP8.29□□□□□ -1.08
ATF3-201ENST00000336937 USP17L10C9JJH3 530 aa8.29□□□□□ -1.08
ATF3-201ENST00000336937 GPR25O00155 361 aa8.29□□□□□ -1.08
ATF3-201ENST00000336937 IGF2BP3O00425 579 aaKnown RBP eCLIP8.29□□□□□ -1.08
ATF3-201ENST00000336937 GJA5P36382 358 aa8.29□□□□□ -1.08
ATF3-201ENST00000336937 GCLCP48506 637 aaPredicted RBP8.29□□□□□ -1.08
ATF3-201ENST00000336937 TDO2P48775 406 aa8.29□□□□□ -1.08
ATF3-201ENST00000336937 DYNLL1P63167 89 aaKnown RBP8.29□□□□□ -1.08
ATF3-201ENST00000336937 PDE4BQ07343 736 aa8.29□□□□□ -1.08
ATF3-201ENST00000336937 ABCB5Q2M3G0 1257 aa8.29□□□□□ -1.08
ATF3-201ENST00000336937 ZMYM1Q5SVZ6 1142 aa8.29□□□□□ -1.08
ATF3-201ENST00000336937 C16orf86Q6ZW13 317 aa8.29□□□□□ -1.08
ATF3-201ENST00000336937 ZFPM1Q8IX07 1006 aa8.29□□□□□ -1.08
ATF3-201ENST00000336937 TNS4Q8IZW8 715 aa8.29□□□□□ -1.08
ATF3-201ENST00000336937 SDR42E1Q8WUS8 393 aa8.29□□□□□ -1.08
ATF3-201ENST00000336937 BRI3BPQ8WY22 251 aa8.29□□□□□ -1.08
ATF3-201ENST00000336937 C12orf42Q96LP6 360 aa8.29□□□□□ -1.08
ATF3-201ENST00000336937 STRBPQ96SI9 672 aaKnown RBP8.29□□□□□ -1.08
ATF3-201ENST00000336937 NAPBQ9H115 298 aa8.29□□□□□ -1.08
ATF3-201ENST00000336937 ARHGEF10LQ9HCE6 1279 aa8.29□□□□□ -1.08
ATF3-201ENST00000336937 TRIM6-TRIM34B2RNG4 842 aa8.28□□□□□ -1.08
ATF3-201ENST00000336937 BTBD19C9JJ37 291 aa8.28□□□□□ -1.08
ATF3-201ENST00000336937 CAPN2P17655 700 aa8.28□□□□□ -1.08
ATF3-201ENST00000336937 OSBPP22059 807 aa8.28□□□□□ -1.08
ATF3-201ENST00000336937 BACE1P56817 501 aa8.28□□□□□ -1.08
ATF3-201ENST00000336937 SP3Q02447 781 aa8.28□□□□□ -1.08
ATF3-201ENST00000336937 MKRN3Q13064 507 aaKnown RBP8.28□□□□□ -1.08
ATF3-201ENST00000336937 CRHR2Q13324 411 aa8.28□□□□□ -1.08
ATF3-201ENST00000336937 MCMDC2Q4G0Z9 681 aa8.28□□□□□ -1.08
ATF3-201ENST00000336937 C12orf60Q5U649 245 aa8.28□□□□□ -1.08
ATF3-201ENST00000336937 SMCR8Q8TEV9 937 aaPredicted RBP8.28□□□□□ -1.08
ATF3-201ENST00000336937 RUFY2Q8WXA3 655 aa8.28□□□□□ -1.08
ATF3-201ENST00000336937 EDC3Q96F86 508 aaKnown RBP8.28□□□□□ -1.08
ATF3-201ENST00000336937 FEZ1Q99689 392 aa8.28□□□□□ -1.08
ATF3-201ENST00000336937 KIAA1683Q9H0B3 1180 aa8.28□□□□□ -1.08
ATF3-201ENST00000336937 PUS7LQ9H0K6 701 aaKnown RBP8.28□□□□□ -1.08
ATF3-201ENST00000336937 BCL11AQ9H165 835 aa8.28□□□□□ -1.08
ATF3-201ENST00000336937 DNAJC18Q9H819 358 aa8.28□□□□□ -1.08
ATF3-201ENST00000336937 ARMT1Q9H993 441 aa8.28□□□□□ -1.08
ATF3-201ENST00000336937 FZD1Q9UP38 647 aa8.28□□□□□ -1.08
ATF3-201ENST00000336937 MYPNQ86TC9 1320 aa8.28□□□□□ -1.08
ATF3-201ENST00000336937 RBBP6Q7Z6E9 1792 aaKnown RBP8.27□□□□□ -1.08
ATF3-201ENST00000336937 A0A0G2JMZ2 1700 aa8.27□□□□□ -1.09
ATF3-201ENST00000336937 TRIM75PA6NK02 468 aa8.27□□□□□ -1.09
ATF3-201ENST00000336937 PDHXO00330 501 aa8.27□□□□□ -1.09
ATF3-201ENST00000336937 IGHDP01880 384 aa8.27□□□□□ -1.09
ATF3-201ENST00000336937 HOXD10P28358 340 aa8.27□□□□□ -1.09
ATF3-201ENST00000336937 HOXA7P31268 230 aaPredicted RBP8.27□□□□□ -1.09
ATF3-201ENST00000336937 FAM110CQ1W6H9 321 aa8.27□□□□□ -1.09
ATF3-201ENST00000336937 USP17L2Q6R6M4 530 aa8.27□□□□□ -1.09
ATF3-201ENST00000336937 PLEKHM2Q8IWE5 1019 aa8.27□□□□□ -1.09
ATF3-201ENST00000336937 ZNF296Q8WUU4 475 aaPredicted RBP8.27□□□□□ -1.09
ATF3-201ENST00000336937 OSBP2Q969R2 916 aa8.27□□□□□ -1.09
ATF3-201ENST00000336937 ZIC5Q96T25 663 aa8.27□□□□□ -1.09
ATF3-201ENST00000336937 RNF41Q9H4P4 317 aaPredicted RBP8.27□□□□□ -1.09
ATF3-201ENST00000336937 KANSL2Q9H9L4 492 aa8.27□□□□□ -1.09
ATF3-201ENST00000336937 DIAPH3Q9NSV4 1193 aa8.27□□□□□ -1.09
ATF3-201ENST00000336937 SAP30BPQ9UHR5 308 aaKnown RBP8.27□□□□□ -1.09
ATF3-201ENST00000336937 MGAMO43451 1857 aa8.27□□□□□ -1.09
ATF3-201ENST00000336937 CCDC171Q6TFL3 1326 aa8.27□□□□□ -1.09
ATF3-201ENST00000336937 GSG1L2A8MUP6 293 aa8.26□□□□□ -1.09
ATF3-201ENST00000336937 USP17L12C9JPN9 530 aa8.26□□□□□ -1.09
ATF3-201ENST00000336937 USP17L21D6R901 530 aa8.26□□□□□ -1.09
ATF3-201ENST00000336937 GH2P01242 217 aa8.26□□□□□ -1.09
ATF3-201ENST00000336937 APPP05067 770 aa8.26□□□□□ -1.09
ATF3-201ENST00000336937 SHMT1P34896 483 aa8.26□□□□□ -1.09
ATF3-201ENST00000336937 PLCD1P51178 756 aa8.26□□□□□ -1.09
ATF3-201ENST00000336937 IRX3P78415 501 aaPredicted RBP8.26□□□□□ -1.09
ATF3-201ENST00000336937 ICA1Q05084 483 aa8.26□□□□□ -1.09
ATF3-201ENST00000336937 SPP2Q13103 211 aa8.26□□□□□ -1.09
ATF3-201ENST00000336937 MTMR2Q13614 643 aa8.26□□□□□ -1.09
ATF3-201ENST00000336937 ALX1Q15699 326 aa8.26□□□□□ -1.09
ATF3-201ENST00000336937 TSHZ3Q63HK5 1081 aa8.26□□□□□ -1.09
ATF3-201ENST00000336937 B4GALNT3Q6L9W6 998 aa8.26□□□□□ -1.09
ATF3-201ENST00000336937 CTR9Q6PD62 1173 aa8.26□□□□□ -1.09
ATF3-201ENST00000336937 FBXO46Q6PJ61 603 aaPredicted RBP8.26□□□□□ -1.09
ATF3-201ENST00000336937 CASC1Q6TDU7 716 aa8.26□□□□□ -1.09
ATF3-201ENST00000336937 GADL1Q6ZQY3 521 aa8.26□□□□□ -1.09
ATF3-201ENST00000336937 IFNL3Q8IZI9 196 aa8.26□□□□□ -1.09
ATF3-201ENST00000336937 FAM43AQ8N2R8 423 aa8.26□□□□□ -1.09
ATF3-201ENST00000336937 MB21D1Q8N884 522 aa8.26□□□□□ -1.09
ATF3-201ENST00000336937 CNKSR2Q8WXI2 1034 aa8.26□□□□□ -1.09
ATF3-201ENST00000336937 RILPL2Q969X0 211 aa8.26□□□□□ -1.09
ATF3-201ENST00000336937 PTPN18Q99952 460 aa8.26□□□□□ -1.09
ATF3-201ENST00000336937 MKNK2Q9HBH9 465 aa8.26□□□□□ -1.09
ATF3-201ENST00000336937 GOPCQ9HD26 462 aa8.26□□□□□ -1.09
ATF3-201ENST00000336937 ANAPC4Q9UJX5 808 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms