RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 HOMER1Q86YM7 354 aa15.91■□□□□ 0.14
SF1-202ENST00000334944 RRP15Q9Y3B9 282 aaKnown RBP15.91■□□□□ 0.14
SF1-202ENST00000334944 CDKL5O76039 1030 aa15.9■□□□□ 0.14
SF1-202ENST00000334944 PPARAQ07869 468 aa15.9■□□□□ 0.14
SF1-202ENST00000334944 SHC4Q6S5L8 630 aa15.9■□□□□ 0.14
SF1-202ENST00000334944 KLHL34Q8N239 644 aa15.9■□□□□ 0.14
SF1-202ENST00000334944 UBXN4Q92575 508 aa15.9■□□□□ 0.14
SF1-202ENST00000334944 CDC5LQ99459 802 aaKnown RBP15.9■□□□□ 0.14
SF1-202ENST00000334944 TPM4P67936 248 aa15.9■□□□□ 0.14
SF1-202ENST00000334944 PNOCQ13519 176 aa15.9■□□□□ 0.14
SF1-202ENST00000334944 SLC39A14Q15043 492 aa15.9■□□□□ 0.14
SF1-202ENST00000334944 MAGEB6P1A0A0J9YX57 407 aa15.89■□□□□ 0.13
SF1-202ENST00000334944 A0A1W2PQ27 194 aa15.89■□□□□ 0.13
SF1-202ENST00000334944 A0A1W2PQ64 194 aa15.89■□□□□ 0.13
SF1-202ENST00000334944 A0A1W2PQD8 194 aa15.89■□□□□ 0.13
SF1-202ENST00000334944 FOXN1O15353 648 aa15.89■□□□□ 0.13
SF1-202ENST00000334944 RTN1Q16799 776 aa15.89■□□□□ 0.13
SF1-202ENST00000334944 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.89■□□□□ 0.13
SF1-202ENST00000334944 DHX37Q8IY37 1157 aaKnown RBP15.89■□□□□ 0.13
SF1-202ENST00000334944 OXER1Q8TDS5 423 aa15.89■□□□□ 0.13
SF1-202ENST00000334944 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.89■□□□□ 0.13
SF1-202ENST00000334944 MINPP1Q9UNW1 487 aa15.89■□□□□ 0.13
SF1-202ENST00000334944 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.89■□□□□ 0.131e-8■□□□□ 11.3
SF1-202ENST00000334944 WDR19Q8NEZ3 1342 aa15.89■□□□□ 0.13
SF1-202ENST00000334944 ALX1Q15699 326 aa15.89■□□□□ 0.13
SF1-202ENST00000334944 SGMS1Q86VZ5 419 aa15.89■□□□□ 0.13
SF1-202ENST00000334944 ZNF384Q8TF68 577 aa15.89■□□□□ 0.13
SF1-202ENST00000334944 AK7Q96M32 723 aa15.89■□□□□ 0.13
SF1-202ENST00000334944 UBAC1Q9BSL1 405 aa15.89■□□□□ 0.13
SF1-202ENST00000334944 CDCA7Q9BWT1 371 aaPredicted RBP15.89■□□□□ 0.13
SF1-202ENST00000334944 DNAI1Q9UI46 699 aa15.89■□□□□ 0.13
SF1-202ENST00000334944 ZNF652Q9Y2D9 606 aa15.89■□□□□ 0.13
SF1-202ENST00000334944 FAM205CA6NFA0 338 aa15.88■□□□□ 0.13
SF1-202ENST00000334944 LMOD1P29536 600 aaPredicted RBP15.88■□□□□ 0.13
SF1-202ENST00000334944 SYKP43405 635 aa15.88■□□□□ 0.13
SF1-202ENST00000334944 E4F1Q66K89 784 aaPredicted RBP15.88■□□□□ 0.13
SF1-202ENST00000334944 NGLY1Q96IV0 654 aa15.88■□□□□ 0.13
SF1-202ENST00000334944 COL1A1P02452 1464 aaPredicted RBP15.88■□□□□ 0.13
SF1-202ENST00000334944 ERICH2A1L162 156 aa15.88■□□□□ 0.13
SF1-202ENST00000334944 NMT2O60551 498 aa15.88■□□□□ 0.13
SF1-202ENST00000334944 ZRANB2O95218 330 aaKnown RBP eCLIP15.88■□□□□ 0.131e-6■■■□□ 14.8
SF1-202ENST00000334944 SMC2O95347 1197 aa15.88■□□□□ 0.13
SF1-202ENST00000334944 DIS3L2Q8IYB7 885 aaKnown RBP15.88■□□□□ 0.13
SF1-202ENST00000334944 KRT23Q9C075 422 aa15.88■□□□□ 0.13
SF1-202ENST00000334944 PTPAQ15257 358 aa15.88■□□□□ 0.13
SF1-202ENST00000334944 MUM1L1Q5H9M0 696 aa15.88■□□□□ 0.13
SF1-202ENST00000334944 SRLQ86TD4 932 aa15.88■□□□□ 0.13
SF1-202ENST00000334944 PACS2Q86VP3 889 aa15.88■□□□□ 0.13
SF1-202ENST00000334944 PDILTQ8N807 584 aa15.88■□□□□ 0.13
SF1-202ENST00000334944 FAM84BQ96KN1 310 aaPredicted RBP15.88■□□□□ 0.13
SF1-202ENST00000334944 LIFRP42702 1097 aa15.87■□□□□ 0.13
SF1-202ENST00000334944 SMC1AQ14683 1233 aaKnown RBP15.87■□□□□ 0.13
SF1-202ENST00000334944 ZNF654Q8IZM8 581 aa15.87■□□□□ 0.13
SF1-202ENST00000334944 MAP3K14Q99558 947 aa15.87■□□□□ 0.13
SF1-202ENST00000334944 CARD6Q9BX69 1037 aa15.87■□□□□ 0.13
SF1-202ENST00000334944 PLEKHA4Q9H4M7 779 aa15.87■□□□□ 0.13
SF1-202ENST00000334944 GEMIN8Q9NWZ8 242 aaKnown RBP15.87■□□□□ 0.13
SF1-202ENST00000334944 TNKSO95271 1327 aa15.87■□□□□ 0.13
SF1-202ENST00000334944 GNPATO15228 680 aa15.87■□□□□ 0.13
SF1-202ENST00000334944 URI1O94763 535 aaPredicted RBP15.87■□□□□ 0.13
SF1-202ENST00000334944 CMA1P23946 247 aa15.87■□□□□ 0.13
SF1-202ENST00000334944 TXNRD3Q86VQ6 643 aa15.87■□□□□ 0.13
SF1-202ENST00000334944 CREBRFQ8IUR6 639 aa15.87■□□□□ 0.13
SF1-202ENST00000334944 REXO1L1PQ8IX06 675 aa15.87■□□□□ 0.13
SF1-202ENST00000334944 MNS1Q8NEH6 495 aa15.87■□□□□ 0.13
SF1-202ENST00000334944 STAG1Q8WVM7 1258 aa15.87■□□□□ 0.13
SF1-202ENST00000334944 PPP1R13BQ96KQ4 1090 aa15.87■□□□□ 0.13
SF1-202ENST00000334944 CNNM2Q9H8M5 875 aa15.87■□□□□ 0.13
SF1-202ENST00000334944 AATFQ9NY61 560 aaKnown RBP eCLIP15.87■□□□□ 0.131e-6■■□□□ 14.4
SF1-202ENST00000334944 THRAP3Q9Y2W1 955 aaKnown RBP15.87■□□□□ 0.13
SF1-202ENST00000334944 C4AP0C0L4 1744 aa15.87■□□□□ 0.13
SF1-202ENST00000334944 C4BP0C0L5 1744 aa15.87■□□□□ 0.13
SF1-202ENST00000334944 ATP1A3P13637 1013 aa15.86■□□□□ 0.13
SF1-202ENST00000334944 LONRF3Q496Y0 759 aa15.86■□□□□ 0.13
SF1-202ENST00000334944 CAVIN4Q5BKX8 364 aa15.86■□□□□ 0.13
SF1-202ENST00000334944 FMNL1O95466 1100 aaPredicted RBP15.86■□□□□ 0.13
SF1-202ENST00000334944 TOB1P50616 345 aaPredicted RBP15.86■□□□□ 0.13
SF1-202ENST00000334944 GRAMD1CQ8IYS0 662 aa15.86■□□□□ 0.13
SF1-202ENST00000334944 IFNKQ9P0W0 207 aa15.86■□□□□ 0.13
SF1-202ENST00000334944 VPS54Q9P1Q0 977 aa15.86■□□□□ 0.13
SF1-202ENST00000334944 JRKLQ9Y4A0 524 aa15.86■□□□□ 0.13
SF1-202ENST00000334944 PRDX5P30044 214 aa15.86■□□□□ 0.13
SF1-202ENST00000334944 PSEN1P49768 467 aa15.86■□□□□ 0.13
SF1-202ENST00000334944 FAM47AQ5JRC9 791 aa15.86■□□□□ 0.13
SF1-202ENST00000334944 NBPF5PQ86XG9 351 aaPredicted RBP15.86■□□□□ 0.13
SF1-202ENST00000334944 FANCBQ8NB91 859 aa15.86■□□□□ 0.13
SF1-202ENST00000334944 GPR101Q96P66 508 aaPredicted RBP15.86■□□□□ 0.13
SF1-202ENST00000334944 PCDHB6Q9Y5E3 794 aa15.86■□□□□ 0.13
SF1-202ENST00000334944 PLCH1Q4KWH8 1693 aa15.85■□□□□ 0.13
SF1-202ENST00000334944 USP17L12C9JPN9 530 aa15.85■□□□□ 0.13
SF1-202ENST00000334944 USP17L21D6R901 530 aa15.85■□□□□ 0.13
SF1-202ENST00000334944 TBC1D8O95759 1140 aa15.85■□□□□ 0.13
SF1-202ENST00000334944 CYP2D6P10635 497 aa15.85■□□□□ 0.13
SF1-202ENST00000334944 GPS2Q13227 327 aa15.85■□□□□ 0.13
SF1-202ENST00000334944 NOSTRINQ8IVI9 506 aa15.85■□□□□ 0.13
SF1-202ENST00000334944 TRIM22Q8IYM9 498 aa15.85■□□□□ 0.13
SF1-202ENST00000334944 RIOK1Q9BRS2 568 aaKnown RBP15.85■□□□□ 0.13
SF1-202ENST00000334944 XPO4Q9C0E2 1151 aaKnown RBP15.85■□□□□ 0.13
SF1-202ENST00000334944 NAT10Q9H0A0 1025 aaKnown RBP15.85■□□□□ 0.13
SF1-202ENST00000334944 MTMR7Q9Y216 660 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms