RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 SPECC1LQ69YQ0 1117 aa9.97□□□□□ -0.81
CLK1-201ENST00000321356 KANK3Q6NY19 840 aa9.97□□□□□ -0.81
CLK1-201ENST00000321356 LCORLQ8N3X6 602 aa9.97□□□□□ -0.81
CLK1-201ENST00000321356 NACAP1Q9BZK3 213 aa9.97□□□□□ -0.81
CLK1-201ENST00000321356 SERTAD1Q9UHV2 236 aa9.97□□□□□ -0.81
CLK1-201ENST00000321356 NFE2L3Q9Y4A8 694 aa9.97□□□□□ -0.81
CLK1-201ENST00000321356 PCDHB6Q9Y5E3 794 aa9.97□□□□□ -0.81
CLK1-201ENST00000321356 FHOD1Q9Y613 1164 aa9.97□□□□□ -0.81
CLK1-201ENST00000321356 BCL9LQ86UU0 1499 aa9.96□□□□□ -0.81
CLK1-201ENST00000321356 RTL9Q8NET4 1388 aa9.96□□□□□ -0.81
CLK1-201ENST00000321356 IGSF3O75054 1194 aa9.96□□□□□ -0.81
CLK1-201ENST00000321356 ZRANB2O95218 330 aaKnown RBP eCLIP9.96□□□□□ -0.81
CLK1-201ENST00000321356 ERCC5P28715 1186 aaPredicted RBP9.96□□□□□ -0.81
CLK1-201ENST00000321356 NR5A1Q13285 461 aa9.96□□□□□ -0.81
CLK1-201ENST00000321356 ARHGAP29Q52LW3 1261 aa9.96□□□□□ -0.81
CLK1-201ENST00000321356 CT47A1Q5JQC4 288 aaPredicted RBP9.96□□□□□ -0.81
CLK1-201ENST00000321356 DZIP3Q86Y13 1208 aaKnown RBP9.96□□□□□ -0.81
CLK1-201ENST00000321356 NUTM2AQ8IVF1 878 aaPredicted RBP9.96□□□□□ -0.81
CLK1-201ENST00000321356 FANCBQ8NB91 859 aa9.96□□□□□ -0.81
CLK1-201ENST00000321356 SMARCE1Q969G3 411 aa9.96□□□□□ -0.81
CLK1-201ENST00000321356 BAG1Q99933 345 aaPredicted RBP9.96□□□□□ -0.81
CLK1-201ENST00000321356 SLAIN2Q9P270 581 aa9.96□□□□□ -0.81
CLK1-201ENST00000321356 CEP131Q9UPN4 1083 aa9.96□□□□□ -0.81
CLK1-201ENST00000321356 DLEC1Q9Y238 1755 aa9.96□□□□□ -0.82
CLK1-201ENST00000321356 EFCAB8A8MWE9 144 aa9.96□□□□□ -0.82
CLK1-201ENST00000321356 NPHP1O15259 732 aa9.96□□□□□ -0.82
CLK1-201ENST00000321356 TDO2P48775 406 aa9.96□□□□□ -0.82
CLK1-201ENST00000321356 PLCD1P51178 756 aa9.96□□□□□ -0.82
CLK1-201ENST00000321356 PPP2R5BQ15173 497 aa9.96□□□□□ -0.82
CLK1-201ENST00000321356 SEC23AQ15436 765 aa9.96□□□□□ -0.82
CLK1-201ENST00000321356 PTPN21Q16825 1174 aa9.96□□□□□ -0.82
CLK1-201ENST00000321356 CREBRFQ8IUR6 639 aa9.96□□□□□ -0.82
CLK1-201ENST00000321356 ZNF654Q8IZM8 581 aa9.96□□□□□ -0.82
CLK1-201ENST00000321356 OXER1Q8TDS5 423 aa9.96□□□□□ -0.82
CLK1-201ENST00000321356 UBXN4Q92575 508 aa9.96□□□□□ -0.82
CLK1-201ENST00000321356 SHISA4Q96DD7 197 aa9.96□□□□□ -0.82
CLK1-201ENST00000321356 RNF26Q9BY78 433 aaPredicted RBP9.96□□□□□ -0.82
CLK1-201ENST00000321356 RNF41Q9H4P4 317 aaPredicted RBP9.96□□□□□ -0.82
CLK1-201ENST00000321356 ANAPC4Q9UJX5 808 aa9.96□□□□□ -0.82
CLK1-201ENST00000321356 SLC4A4Q9Y6R1 1079 aa9.96□□□□□ -0.82
CLK1-201ENST00000321356 RREB1Q92766 1687 aa9.95□□□□□ -0.82
CLK1-201ENST00000321356 A0A1B0GTH6 734 aa9.95□□□□□ -0.82
CLK1-201ENST00000321356 SNAP23O00161 211 aa9.95□□□□□ -0.82
CLK1-201ENST00000321356 URI1O94763 535 aaPredicted RBP9.95□□□□□ -0.82
CLK1-201ENST00000321356 PNMA6AP0CW24 399 aaPredicted RBP9.95□□□□□ -0.82
CLK1-201ENST00000321356 NR1I3Q14994 352 aa9.95□□□□□ -0.82
CLK1-201ENST00000321356 ZNF827Q17R98 1081 aa9.95□□□□□ -0.82
CLK1-201ENST00000321356 RRP12Q5JTH9 1297 aaKnown RBP9.95□□□□□ -0.82
CLK1-201ENST00000321356 USP49Q70CQ1 688 aa9.95□□□□□ -0.82
CLK1-201ENST00000321356 APTXQ7Z2E3 356 aaKnown RBP9.95□□□□□ -0.82
CLK1-201ENST00000321356 ZKSCAN3Q9BRR0 538 aa9.95□□□□□ -0.82
CLK1-201ENST00000321356 SEC31BQ9NQW1 1179 aa9.95□□□□□ -0.82
CLK1-201ENST00000321356 AATFQ9NY61 560 aaKnown RBP eCLIP9.95□□□□□ -0.82
CLK1-201ENST00000321356 TAOK2Q9UL54 1235 aa9.95□□□□□ -0.82
CLK1-201ENST00000321356 DUOX1Q9NRD9 1551 aa9.95□□□□□ -0.82
CLK1-201ENST00000321356 A0A1B0GUL6 1792 aa9.94□□□□□ -0.82
CLK1-201ENST00000321356 MYH2Q9UKX2 1941 aa9.94□□□□□ -0.82
CLK1-201ENST00000321356 WNK3Q9BYP7 1800 aa9.94□□□□□ -0.82
CLK1-201ENST00000321356 ERICH2A1L162 156 aa9.94□□□□□ -0.82
CLK1-201ENST00000321356 TPM1P09493 284 aa9.94□□□□□ -0.82
CLK1-201ENST00000321356 EIF5P55010 431 aaKnown RBP9.94□□□□□ -0.82
CLK1-201ENST00000321356 MAP3K9P80192 1104 aa9.94□□□□□ -0.82
CLK1-201ENST00000321356 FUT2Q10981 343 aa9.94□□□□□ -0.82
CLK1-201ENST00000321356 TOGARAM2Q6ZUX3 1019 aa9.94□□□□□ -0.82
CLK1-201ENST00000321356 ZNF771Q7L3S4 317 aaPredicted RBP9.94□□□□□ -0.82
CLK1-201ENST00000321356 SH3RF1Q7Z6J0 888 aa9.94□□□□□ -0.82
CLK1-201ENST00000321356 TRMT44Q8IYL2 757 aaKnown RBP9.94□□□□□ -0.82
CLK1-201ENST00000321356 GRAMD1CQ8IYS0 662 aa9.94□□□□□ -0.82
CLK1-201ENST00000321356 MNS1Q8NEH6 495 aa9.94□□□□□ -0.82
CLK1-201ENST00000321356 KIFC2Q96AC6 838 aa9.94□□□□□ -0.82
CLK1-201ENST00000321356 WDR24Q96S15 920 aa9.94□□□□□ -0.82
CLK1-201ENST00000321356 CARD6Q9BX69 1037 aa9.94□□□□□ -0.82
CLK1-201ENST00000321356 CSRNP2Q9H175 543 aa9.94□□□□□ -0.82
CLK1-201ENST00000321356 SAMSN1Q9NSI8 373 aaKnown RBP9.94□□□□□ -0.82
CLK1-201ENST00000321356 RAI14Q9P0K7 980 aa9.94□□□□□ -0.82
CLK1-201ENST00000321356 CICQ96RK0 1608 aaPredicted RBP9.94□□□□□ -0.82
CLK1-201ENST00000321356 CACNA1SQ13698 1873 aa9.94□□□□□ -0.82
CLK1-201ENST00000321356 DOT1LQ8TEK3 1739 aa9.94□□□□□ -0.82
CLK1-201ENST00000321356 A0A087X0B3 334 aa9.93□□□□□ -0.82
CLK1-201ENST00000321356 TRIM75PA6NK02 468 aa9.93□□□□□ -0.82
CLK1-201ENST00000321356 CDK11BP21127 795 aaKnown RBP9.93□□□□□ -0.82
CLK1-201ENST00000321356 PBX1P40424 430 aa9.93□□□□□ -0.82
CLK1-201ENST00000321356 BCAMP50895 628 aa9.93□□□□□ -0.82
CLK1-201ENST00000321356 PPARAQ07869 468 aa9.93□□□□□ -0.82
CLK1-201ENST00000321356 CUL4BQ13620 913 aa9.93□□□□□ -0.82
CLK1-201ENST00000321356 PKN1Q16512 942 aa9.93□□□□□ -0.82
CLK1-201ENST00000321356 HSP90AA4PQ58FG1 418 aa9.93□□□□□ -0.82
CLK1-201ENST00000321356 SUSD4Q5VX71 490 aa9.93□□□□□ -0.82
CLK1-201ENST00000321356 CMTR1Q8N1G2 835 aaKnown RBP9.93□□□□□ -0.82
CLK1-201ENST00000321356 PANX2Q96RD6 677 aa9.93□□□□□ -0.82
CLK1-201ENST00000321356 PHF20Q9BVI0 1012 aa9.93□□□□□ -0.82
CLK1-201ENST00000321356 CABP5Q9NP86 173 aa9.93□□□□□ -0.82
CLK1-201ENST00000321356 ARGLU1Q9NWB6 273 aaPredicted RBP9.93□□□□□ -0.82
CLK1-201ENST00000321356 MRFAP1Q9Y605 127 aa9.93□□□□□ -0.82
CLK1-201ENST00000321356 COL14A1Q05707 1796 aaKnown RBP9.93□□□□□ -0.82
CLK1-201ENST00000321356 ATP8B1O43520 1251 aa9.93□□□□□ -0.82
CLK1-201ENST00000321356 PLA2G4AP47712 749 aa9.93□□□□□ -0.82
CLK1-201ENST00000321356 ADKP55263 362 aaKnown RBP9.93□□□□□ -0.82
CLK1-201ENST00000321356 CDKAL1Q5VV42 579 aa9.93□□□□□ -0.82
CLK1-201ENST00000321356 RSRC2Q7L4I2 434 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms