RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 AS3MTQ9HBK9 375 aa13.36□□□□□ -0.27
AMBRA1-201ENST00000314845 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.36□□□□□ -0.27
AMBRA1-201ENST00000314845 CSADQ9Y600 493 aa13.36□□□□□ -0.27
AMBRA1-201ENST00000314845 DCAF15Q66K64 600 aa13.35□□□□□ -0.27
AMBRA1-201ENST00000314845 SYT10Q6XYQ8 523 aa13.35□□□□□ -0.27
AMBRA1-201ENST00000314845 MAK16Q9BXY0 300 aaKnown RBP13.35□□□□□ -0.27
AMBRA1-201ENST00000314845 COPRSQ9NQ92 184 aa13.35□□□□□ -0.27
AMBRA1-201ENST00000314845 TRPC5Q9UL62 973 aaPredicted RBP13.35□□□□□ -0.27
AMBRA1-201ENST00000314845 SSH2Q76I76 1423 aa13.35□□□□□ -0.27
AMBRA1-201ENST00000314845 YEATS2Q9ULM3 1422 aa13.35□□□□□ -0.27
AMBRA1-201ENST00000314845 FAM47AQ5JRC9 791 aa13.35□□□□□ -0.27
AMBRA1-201ENST00000314845 PAIP2Q9BPZ3 127 aaKnown RBP13.35□□□□□ -0.27
AMBRA1-201ENST00000314845 PNMA2Q9UL42 364 aa13.35□□□□□ -0.27
AMBRA1-201ENST00000314845 MAPK8IP1Q9UQF2 711 aa13.35□□□□□ -0.27
AMBRA1-201ENST00000314845 GINS2Q9Y248 185 aa13.35□□□□□ -0.27
AMBRA1-201ENST00000314845 IL6STP40189 918 aaPredicted RBP13.35□□□□□ -0.27
AMBRA1-201ENST00000314845 GYG1P46976 350 aa13.35□□□□□ -0.27
AMBRA1-201ENST00000314845 LIN9Q5TKA1 542 aa13.35□□□□□ -0.27
AMBRA1-201ENST00000314845 CABP7Q86V35 215 aa13.35□□□□□ -0.27
AMBRA1-201ENST00000314845 IFNL3Q8IZI9 196 aa13.35□□□□□ -0.27
AMBRA1-201ENST00000314845 EDC3Q96F86 508 aaKnown RBP13.35□□□□□ -0.27
AMBRA1-201ENST00000314845 HAUS7Q99871 368 aa13.35□□□□□ -0.27
AMBRA1-201ENST00000314845 TRIM6Q9C030 488 aaPredicted RBP13.35□□□□□ -0.27
AMBRA1-201ENST00000314845 KCNJ14Q9UNX9 436 aa13.35□□□□□ -0.27
AMBRA1-201ENST00000314845 PRKG1Q13976 671 aa13.35□□□□□ -0.27
AMBRA1-201ENST00000314845 CCDC84Q86UT8 332 aaPredicted RBP13.35□□□□□ -0.27
AMBRA1-201ENST00000314845 CCDC26Q8TAB7 109 aa13.35□□□□□ -0.27
AMBRA1-201ENST00000314845 MRPS9P82933 396 aaKnown RBP13.34□□□□□ -0.27
AMBRA1-201ENST00000314845 NLRX1Q86UT6 975 aa13.34□□□□□ -0.27
AMBRA1-201ENST00000314845 ATRIPQ8WXE1 791 aa13.34□□□□□ -0.27
AMBRA1-201ENST00000314845 VPS54Q9P1Q0 977 aa13.34□□□□□ -0.27
AMBRA1-201ENST00000314845 FAM169AQ9Y6X4 670 aa13.34□□□□□ -0.27
AMBRA1-201ENST00000314845 SMCO2A6NFE2 343 aa13.34□□□□□ -0.27
AMBRA1-201ENST00000314845 EXOC3O60645 756 aa13.34□□□□□ -0.27
AMBRA1-201ENST00000314845 FANCCQ00597 558 aa13.34□□□□□ -0.27
AMBRA1-201ENST00000314845 INF2Q27J81 1249 aa13.34□□□□□ -0.27
AMBRA1-201ENST00000314845 GIMAP7Q8NHV1 300 aa13.34□□□□□ -0.27
AMBRA1-201ENST00000314845 SMCR8Q8TEV9 937 aaPredicted RBP13.34□□□□□ -0.27
AMBRA1-201ENST00000314845 GTF3C6Q969F1 213 aa13.34□□□□□ -0.27
AMBRA1-201ENST00000314845 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.34□□□□□ -0.271e-7■■■■■ 29
AMBRA1-201ENST00000314845 PCP11498 1178 aaKnown RBP13.34□□□□□ -0.27
AMBRA1-201ENST00000314845 POSTNQ15063 836 aa13.34□□□□□ -0.27
AMBRA1-201ENST00000314845 SLC9C1Q4G0N8 1177 aa13.34□□□□□ -0.27
AMBRA1-201ENST00000314845 CYP26C1Q6V0L0 522 aa13.34□□□□□ -0.27
AMBRA1-201ENST00000314845 C2CD5Q86YS7 1000 aa13.34□□□□□ -0.27
AMBRA1-201ENST00000314845 MYCT1Q8N699 235 aa13.34□□□□□ -0.27
AMBRA1-201ENST00000314845 NFE2L3Q9Y4A8 694 aa13.34□□□□□ -0.27
AMBRA1-201ENST00000314845 NDC80O14777 642 aa13.34□□□□□ -0.27
AMBRA1-201ENST00000314845 JAK2O60674 1132 aa13.34□□□□□ -0.27
AMBRA1-201ENST00000314845 NLRP12P59046 1061 aa13.34□□□□□ -0.27
AMBRA1-201ENST00000314845 GNPTABQ3T906 1256 aa13.34□□□□□ -0.27
AMBRA1-201ENST00000314845 IWS1Q96ST2 819 aa13.34□□□□□ -0.27
AMBRA1-201ENST00000314845 BCS1LQ9Y276 419 aa13.34□□□□□ -0.27
AMBRA1-201ENST00000314845 ARHGEF5Q12774 1597 aa13.33□□□□□ -0.27
AMBRA1-201ENST00000314845 PBRM1Q86U86 1689 aa13.33□□□□□ -0.27
AMBRA1-201ENST00000314845 DDX39AO00148 427 aaKnown RBP13.33□□□□□ -0.27
AMBRA1-201ENST00000314845 PDE8BO95263 885 aa13.33□□□□□ -0.27
AMBRA1-201ENST00000314845 ASIC2Q16515 512 aa13.33□□□□□ -0.27
AMBRA1-201ENST00000314845 MYSM1Q5VVJ2 828 aa13.33□□□□□ -0.27
AMBRA1-201ENST00000314845 CCDC63Q8NA47 563 aa13.33□□□□□ -0.27
AMBRA1-201ENST00000314845 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.33□□□□□ -0.277e-8■□□□□ 8.2
AMBRA1-201ENST00000314845 MYOM2P54296 1465 aa13.33□□□□□ -0.28
AMBRA1-201ENST00000314845 TUBB2AQ13885 445 aa13.33□□□□□ -0.28
AMBRA1-201ENST00000314845 CEP63Q96MT8 703 aa13.33□□□□□ -0.28
AMBRA1-201ENST00000314845 TUBB2BQ9BVA1 445 aa13.33□□□□□ -0.28
AMBRA1-201ENST00000314845 EFCAB6Q5THR3 1501 aa13.33□□□□□ -0.28
AMBRA1-201ENST00000314845 BCAMP50895 628 aa13.33□□□□□ -0.28
AMBRA1-201ENST00000314845 CHRNDQ07001 517 aa13.33□□□□□ -0.28
AMBRA1-201ENST00000314845 IFT81Q8WYA0 676 aa13.33□□□□□ -0.28
AMBRA1-201ENST00000314845 ZSCAN10Q96SZ4 725 aaPredicted RBP13.33□□□□□ -0.28
AMBRA1-201ENST00000314845 UBE3CQ15386 1083 aa13.33□□□□□ -0.28
AMBRA1-201ENST00000314845 CDC37L1Q7L3B6 337 aa13.33□□□□□ -0.28
AMBRA1-201ENST00000314845 DYMQ7RTS9 669 aa13.33□□□□□ -0.28
AMBRA1-201ENST00000314845 UBE2Q2Q8WVN8 375 aa13.33□□□□□ -0.28
AMBRA1-201ENST00000314845 KIFC2Q96AC6 838 aa13.33□□□□□ -0.28
AMBRA1-201ENST00000314845 CCDC114Q96M63 670 aa13.33□□□□□ -0.28
AMBRA1-201ENST00000314845 KDM3AQ9Y4C1 1321 aa13.32□□□□□ -0.28
AMBRA1-201ENST00000314845 GAS7O60861 476 aa13.32□□□□□ -0.28
AMBRA1-201ENST00000314845 ZBTB16Q05516 673 aa13.32□□□□□ -0.28
AMBRA1-201ENST00000314845 USPL1Q5W0Q7 1092 aa13.32□□□□□ -0.28
AMBRA1-201ENST00000314845 DPY19L2Q6NUT2 758 aa13.32□□□□□ -0.28
AMBRA1-201ENST00000314845 CEP128Q6ZU80 1094 aa13.32□□□□□ -0.28
AMBRA1-201ENST00000314845 FANCBQ8NB91 859 aa13.32□□□□□ -0.28
AMBRA1-201ENST00000314845 PNMA1Q8ND90 353 aa13.32□□□□□ -0.28
AMBRA1-201ENST00000314845 GPR108Q9NPR9 543 aa13.32□□□□□ -0.28
AMBRA1-201ENST00000314845 SLC5A4Q9NY91 659 aa13.32□□□□□ -0.28
AMBRA1-201ENST00000314845 IGSF1Q8N6C5 1336 aa13.32□□□□□ -0.28
AMBRA1-201ENST00000314845 A0A0D9SFI3 127 aa13.32□□□□□ -0.28
AMBRA1-201ENST00000314845 HSPD1P10809 573 aaKnown RBP13.32□□□□□ -0.28
AMBRA1-201ENST00000314845 TMC4Q7Z404 712 aa13.32□□□□□ -0.28
AMBRA1-201ENST00000314845 TMTC1Q8IUR5 882 aa13.32□□□□□ -0.28
AMBRA1-201ENST00000314845 BEGAINQ9BUH8 593 aa13.32□□□□□ -0.28
AMBRA1-201ENST00000314845 METP08581 1390 aa13.32□□□□□ -0.28
AMBRA1-201ENST00000314845 TLDC2A0PJX2 215 aa13.32□□□□□ -0.28
AMBRA1-201ENST00000314845 SEMA3EO15041 775 aa13.32□□□□□ -0.28
AMBRA1-201ENST00000314845 GAS8O95995 478 aa13.32□□□□□ -0.28
AMBRA1-201ENST00000314845 ERCC5P28715 1186 aaPredicted RBP13.32□□□□□ -0.28
AMBRA1-201ENST00000314845 CCDC25Q86WR0 208 aa13.32□□□□□ -0.28
AMBRA1-201ENST00000314845 GPR161Q8N6U8 529 aaKnown RBP13.32□□□□□ -0.28
AMBRA1-201ENST00000314845 CFAP74Q9C0B2 1584 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms