RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 CAPZA3Q96KX2 299 aa16.66■□□□□ 0.26
COL6A2-202ENST00000310645 ORAI2Q96SN7 254 aa16.66■□□□□ 0.26
COL6A2-202ENST00000310645 CSRNP2Q9H175 543 aa16.66■□□□□ 0.26
COL6A2-202ENST00000310645 TRIM10Q9UDY6 481 aa16.66■□□□□ 0.26
COL6A2-202ENST00000310645 SYNRGQ9UMZ2 1314 aa16.65■□□□□ 0.26
COL6A2-202ENST00000310645 LMO7Q8WWI1 1683 aa16.65■□□□□ 0.26
COL6A2-202ENST00000310645 CPDO75976 1380 aa16.65■□□□□ 0.26
COL6A2-202ENST00000310645 PES1O00541 588 aaKnown RBP16.65■□□□□ 0.26
COL6A2-202ENST00000310645 PTPREP23469 700 aa16.65■□□□□ 0.26
COL6A2-202ENST00000310645 CABP5Q9NP86 173 aa16.65■□□□□ 0.26
COL6A2-202ENST00000310645 N4BP3O15049 544 aa16.65■□□□□ 0.26
COL6A2-202ENST00000310645 PIP4K2BP78356 416 aa16.65■□□□□ 0.26
COL6A2-202ENST00000310645 RASGRP2Q7LDG7 609 aa16.65■□□□□ 0.26
COL6A2-202ENST00000310645 HDAC6Q9UBN7 1215 aa16.65■□□□□ 0.26
COL6A2-202ENST00000310645 MYO6Q9UM54 1294 aa16.65■□□□□ 0.26
COL6A2-202ENST00000310645 PHKG2P15735 406 aa16.64■□□□□ 0.25
COL6A2-202ENST00000310645 SARSP49591 514 aaKnown RBP16.64■□□□□ 0.25
COL6A2-202ENST00000310645 NTRK3Q16288 839 aa16.64■□□□□ 0.25
COL6A2-202ENST00000310645 EPSTI1Q96J88 318 aa16.64■□□□□ 0.25
COL6A2-202ENST00000310645 TFR2Q9UP52 801 aa16.64■□□□□ 0.25
COL6A2-202ENST00000310645 A1BGP04217 495 aa16.64■□□□□ 0.25
COL6A2-202ENST00000310645 GYPCP04921 128 aa16.64■□□□□ 0.25
COL6A2-202ENST00000310645 TATP17735 454 aaPredicted RBP16.64■□□□□ 0.25
COL6A2-202ENST00000310645 SPATA1Q5VX52 437 aa16.64■□□□□ 0.25
COL6A2-202ENST00000310645 CCDC148Q8NFR7 591 aa16.64■□□□□ 0.25
COL6A2-202ENST00000310645 NAA15Q9BXJ9 866 aaKnown RBP16.64■□□□□ 0.25
COL6A2-202ENST00000310645 FAM217BQ9NTX9 383 aaPredicted RBP16.64■□□□□ 0.25
COL6A2-202ENST00000310645 SRGAP2O75044 1071 aa16.64■□□□□ 0.25
COL6A2-202ENST00000310645 CABP4P57796 275 aa16.64■□□□□ 0.25
COL6A2-202ENST00000310645 CTDSPL2Q05D32 466 aa16.64■□□□□ 0.25
COL6A2-202ENST00000310645 GSPT2Q8IYD1 628 aaKnown RBP16.64■□□□□ 0.25
COL6A2-202ENST00000310645 OXER1Q8TDS5 423 aa16.64■□□□□ 0.25
COL6A2-202ENST00000310645 AFAP1L1Q8TED9 768 aa16.64■□□□□ 0.25
COL6A2-202ENST00000310645 NUP133Q8WUM0 1156 aa16.64■□□□□ 0.25
COL6A2-202ENST00000310645 ADD3Q9UEY8 706 aaKnown RBP16.64■□□□□ 0.25
COL6A2-202ENST00000310645 MKRN1Q9UHC7 482 aaKnown RBP16.64■□□□□ 0.25
COL6A2-202ENST00000310645 WWC3Q9ULE0 1092 aa16.64■□□□□ 0.25
COL6A2-202ENST00000310645 TTF2Q9UNY4 1162 aaKnown RBP16.64■□□□□ 0.25
COL6A2-202ENST00000310645 RNF225M0QZC1 329 aaPredicted RBP16.63■□□□□ 0.25
COL6A2-202ENST00000310645 E2F4Q16254 413 aa16.63■□□□□ 0.25
COL6A2-202ENST00000310645 CNGA4Q8IV77 575 aa16.63■□□□□ 0.25
COL6A2-202ENST00000310645 THEMISQ8N1K5 641 aaPredicted RBP16.63■□□□□ 0.25
COL6A2-202ENST00000310645 MICALL1Q8N3F8 863 aa16.63■□□□□ 0.25
COL6A2-202ENST00000310645 NBPF26B4DH59 902 aa16.63■□□□□ 0.25
COL6A2-202ENST00000310645 ACTN4O43707 911 aaKnown RBP16.63■□□□□ 0.25
COL6A2-202ENST00000310645 ERVK-24P63145 666 aa16.63■□□□□ 0.25
COL6A2-202ENST00000310645 SART3Q15020 963 aaKnown RBP16.63■□□□□ 0.25
COL6A2-202ENST00000310645 WHAMMP3Q1A5X7 153 aa16.63■□□□□ 0.25
COL6A2-202ENST00000310645 NBPF14Q5TI25 921 aa16.63■□□□□ 0.25
COL6A2-202ENST00000310645 NBPF10Q6P3W6 841 aaKnown RBP16.63■□□□□ 0.25
COL6A2-202ENST00000310645 CTR9Q6PD62 1173 aa16.63■□□□□ 0.25
COL6A2-202ENST00000310645 NBPF15Q8N660 670 aa16.63■□□□□ 0.25
COL6A2-202ENST00000310645 SMARCC1Q92922 1105 aaPredicted RBP16.63■□□□□ 0.25
COL6A2-202ENST00000310645 ERCC5P28715 1186 aaPredicted RBP16.63■□□□□ 0.25
COL6A2-202ENST00000310645 APTXQ7Z2E3 356 aaKnown RBP16.63■□□□□ 0.25
COL6A2-202ENST00000310645 CTNND2Q9UQB3 1225 aa16.63■□□□□ 0.25
COL6A2-202ENST00000310645 PPM1EQ8WY54 764 aa16.62■□□□□ 0.25
COL6A2-202ENST00000310645 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.62■□□□□ 0.25
COL6A2-202ENST00000310645 TAB2Q9NYJ8 693 aa16.62■□□□□ 0.25
COL6A2-202ENST00000310645 MAPK8IP1Q9UQF2 711 aa16.62■□□□□ 0.25
COL6A2-202ENST00000310645 NFAT5O94916 1531 aa16.62■□□□□ 0.25
COL6A2-202ENST00000310645 FAM205CA6NFA0 338 aa16.62■□□□□ 0.25
COL6A2-202ENST00000310645 MMP1P03956 469 aa16.62■□□□□ 0.25
COL6A2-202ENST00000310645 TRIM22Q8IYM9 498 aa16.62■□□□□ 0.25
COL6A2-202ENST00000310645 IGDCC4Q8TDY8 1250 aa16.62■□□□□ 0.25
COL6A2-202ENST00000310645 hCG_1642624A0A1W2PR95 340 aa16.61■□□□□ 0.25
COL6A2-202ENST00000310645 KRT9P35527 623 aa16.61■□□□□ 0.25
COL6A2-202ENST00000310645 CORO7P57737 925 aa16.61■□□□□ 0.25
COL6A2-202ENST00000310645 NT5DC1Q5TFE4 455 aa16.61■□□□□ 0.25
COL6A2-202ENST00000310645 IFNL2Q8IZJ0 200 aa16.61■□□□□ 0.25
COL6A2-202ENST00000310645 TRIML1Q8N9V2 468 aa16.61■□□□□ 0.25
COL6A2-202ENST00000310645 CHP1Q99653 195 aa16.61■□□□□ 0.25
COL6A2-202ENST00000310645 LY9Q9HBG7 655 aa16.61■□□□□ 0.25
COL6A2-202ENST00000310645 A0A087X0B3 334 aa16.61■□□□□ 0.25
COL6A2-202ENST00000310645 BLZF1Q9H2G9 400 aa16.61■□□□□ 0.25
COL6A2-202ENST00000310645 MED4Q9NPJ6 270 aa16.61■□□□□ 0.25
COL6A2-202ENST00000310645 ZSWIM5Q9P217 1185 aa16.61■□□□□ 0.25
COL6A2-202ENST00000310645 KDM6AO15550 1401 aaPredicted RBP16.61■□□□□ 0.25
COL6A2-202ENST00000310645 RILPL1Q5EBL4 403 aa16.61■□□□□ 0.25
COL6A2-202ENST00000310645 KANK3Q6NY19 840 aa16.61■□□□□ 0.25
COL6A2-202ENST00000310645 TMTC1Q8IUR5 882 aa16.61■□□□□ 0.25
COL6A2-202ENST00000310645 GPATCH11Q8N954 259 aa16.61■□□□□ 0.25
COL6A2-202ENST00000310645 MCAMP43121 646 aa16.6■□□□□ 0.25
COL6A2-202ENST00000310645 DNAJC21Q5F1R6 531 aaKnown RBP16.6■□□□□ 0.25
COL6A2-202ENST00000310645 PPFIA4O75335 1185 aa16.6■□□□□ 0.25
COL6A2-202ENST00000310645 ARHGAP25P42331 645 aa16.6■□□□□ 0.25
COL6A2-202ENST00000310645 TUBB2AQ13885 445 aa16.6■□□□□ 0.25
COL6A2-202ENST00000310645 CTAGE1Q96RT6 745 aa16.6■□□□□ 0.25
COL6A2-202ENST00000310645 TUBB2BQ9BVA1 445 aa16.6■□□□□ 0.25
COL6A2-202ENST00000310645 DEF6Q9H4E7 631 aa16.6■□□□□ 0.25
COL6A2-202ENST00000310645 AFDNP55196 1824 aaKnown RBP16.6■□□□□ 0.25
COL6A2-202ENST00000310645 SYF2O95926 243 aaKnown RBP16.6■□□□□ 0.25
COL6A2-202ENST00000310645 METTL24Q5JXM2 366 aa16.6■□□□□ 0.25
COL6A2-202ENST00000310645 CAGE1Q8TC20 777 aa16.6■□□□□ 0.25
COL6A2-202ENST00000310645 FAM89AQ96GI7 184 aa16.6■□□□□ 0.25
COL6A2-202ENST00000310645 TMEM87BQ96K49 555 aa16.6■□□□□ 0.25
COL6A2-202ENST00000310645 MMS19Q96T76 1030 aa16.6■□□□□ 0.25
COL6A2-202ENST00000310645 CRACR2AQ9BSW2 395 aa16.6■□□□□ 0.25
COL6A2-202ENST00000310645 ABHD10Q9NUJ1 306 aa16.6■□□□□ 0.25
COL6A2-202ENST00000310645 SRPRBQ9Y5M8 271 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms