RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 SWAP70Q9UH65 585 aa26.37■■□□□ 1.81
IRF3-201ENST00000309877 CLRN2A0PK11 232 aa26.36■■□□□ 1.81
IRF3-201ENST00000309877 PDCP20941 246 aa26.36■■□□□ 1.81
IRF3-201ENST00000309877 SYT1P21579 422 aa26.36■■□□□ 1.81
IRF3-201ENST00000309877 GMPSP49915 693 aaPredicted RBP26.36■■□□□ 1.81
IRF3-201ENST00000309877 HMGN5P82970 282 aaKnown RBP26.36■■□□□ 1.81
IRF3-201ENST00000309877 FAM184AQ8NB25 1140 aa26.36■■□□□ 1.81
IRF3-201ENST00000309877 SMARCC2Q8TAQ2 1214 aa26.36■■□□□ 1.81
IRF3-201ENST00000309877 DPF2Q92785 391 aa26.36■■□□□ 1.81
IRF3-201ENST00000309877 MYL10Q9BUA6 226 aa26.36■■□□□ 1.81
IRF3-201ENST00000309877 WDR33Q9C0J8 1336 aaKnown RBP26.35■■□□□ 1.81
IRF3-201ENST00000309877 PTPDC1A2A3K4 754 aa26.35■■□□□ 1.81
IRF3-201ENST00000309877 NMT2O60551 498 aa26.35■■□□□ 1.81
IRF3-201ENST00000309877 CTDNEP1O95476 244 aa26.35■■□□□ 1.81
IRF3-201ENST00000309877 RXRAP19793 462 aa26.35■■□□□ 1.81
IRF3-201ENST00000309877 ZNF280AP59817 542 aaPredicted RBP26.35■■□□□ 1.81
IRF3-201ENST00000309877 SPDYE2Q495Y8 402 aa26.35■■□□□ 1.81
IRF3-201ENST00000309877 LARP1BQ659C4 914 aaKnown RBP26.35■■□□□ 1.81
IRF3-201ENST00000309877 CPLX2Q6PUV4 134 aaKnown RBP26.35■■□□□ 1.81
IRF3-201ENST00000309877 ZNF654Q8IZM8 581 aa26.35■■□□□ 1.81
IRF3-201ENST00000309877 DDX11Q96FC9 970 aa26.35■■□□□ 1.81
IRF3-201ENST00000309877 EHD4Q9H223 541 aa26.35■■□□□ 1.81
IRF3-201ENST00000309877 TCP11L1Q9NUJ3 509 aa26.35■■□□□ 1.81
IRF3-201ENST00000309877 ZNF541Q9H0D2 1346 aa26.35■■□□□ 1.81
IRF3-201ENST00000309877 TCP10L2B9ZVM9 353 aa26.34■■□□□ 1.81
IRF3-201ENST00000309877 STX6O43752 255 aa26.34■■□□□ 1.81
IRF3-201ENST00000309877 BRD1O95696 1058 aa26.34■■□□□ 1.81
IRF3-201ENST00000309877 CATIPQ7Z7H3 387 aa26.34■■□□□ 1.81
IRF3-201ENST00000309877 CCDC144CPQ8IYA2 1237 aa26.34■■□□□ 1.81
IRF3-201ENST00000309877 CRACR2BQ8N4Y2 399 aaPredicted RBP26.34■■□□□ 1.81
IRF3-201ENST00000309877 PI4KBQ9UBF8 816 aa26.34■■□□□ 1.81
IRF3-201ENST00000309877 ZDHHC9Q9Y397 364 aa26.34■■□□□ 1.81
IRF3-201ENST00000309877 KIF3AQ9Y496 699 aa26.34■■□□□ 1.81
IRF3-201ENST00000309877 DDTLA6NHG4 134 aaPredicted RBP26.34■■□□□ 1.81
IRF3-201ENST00000309877 PDIA4P13667 645 aaKnown RBP26.34■■□□□ 1.81
IRF3-201ENST00000309877 YBX3P16989 372 aaKnown RBP eCLIP26.34■■□□□ 1.81
IRF3-201ENST00000309877 RCAN1P53805 252 aa26.34■■□□□ 1.81
IRF3-201ENST00000309877 NUP133Q8WUM0 1156 aa26.34■■□□□ 1.81
IRF3-201ENST00000309877 TRIM34Q9BYJ4 488 aa26.34■■□□□ 1.81
IRF3-201ENST00000309877 NFKBIBQ15653 356 aa26.33■■□□□ 1.81
IRF3-201ENST00000309877 FOXD4L5Q5VV16 416 aaPredicted RBP26.33■■□□□ 1.81
IRF3-201ENST00000309877 DGKHQ86XP1 1220 aa26.33■■□□□ 1.81
IRF3-201ENST00000309877 FOXD4L4Q8WXT5 416 aaPredicted RBP26.33■■□□□ 1.81
IRF3-201ENST00000309877 ZBED3Q96IU2 234 aaPredicted RBP26.33■■□□□ 1.81
IRF3-201ENST00000309877 VEZTQ9HBM0 779 aa26.33■■□□□ 1.81
IRF3-201ENST00000309877 SHTN1A0MZ66 631 aa26.32■■□□□ 1.8
IRF3-201ENST00000309877 CDKL5O76039 1030 aa26.32■■□□□ 1.8
IRF3-201ENST00000309877 ADD1P35611 737 aaKnown RBP26.32■■□□□ 1.8
IRF3-201ENST00000309877 RBM26Q5T8P6 1007 aaKnown RBP26.32■■□□□ 1.8
IRF3-201ENST00000309877 SH3BP5LQ7L8J4 393 aa26.32■■□□□ 1.8
IRF3-201ENST00000309877 MICALL2Q8IY33 904 aa26.32■■□□□ 1.8
IRF3-201ENST00000309877 NEDD1Q8NHV4 660 aa26.32■■□□□ 1.8
IRF3-201ENST00000309877 IL17RBQ9NRM6 502 aa26.32■■□□□ 1.8
IRF3-201ENST00000309877 CNOT7Q9UIV1 285 aaKnown RBP26.32■■□□□ 1.8
IRF3-201ENST00000309877 WNT10BO00744 389 aa26.31■■□□□ 1.8
IRF3-201ENST00000309877 RTN1Q16799 776 aa26.31■■□□□ 1.8
IRF3-201ENST00000309877 FKBP1CQ5VVH2 108 aa26.31■■□□□ 1.8
IRF3-201ENST00000309877 FOXP4Q8IVH2 680 aaPredicted RBP26.31■■□□□ 1.8
IRF3-201ENST00000309877 TAOK2Q9UL54 1235 aa26.31■■□□□ 1.8
IRF3-201ENST00000309877 CCDC196A0A1B0GTZ2 297 aa26.31■■□□□ 1.8
IRF3-201ENST00000309877 CALM1P0DP23 149 aa26.31■■□□□ 1.8
IRF3-201ENST00000309877 CALM2P0DP24 149 aa26.31■■□□□ 1.8
IRF3-201ENST00000309877 CALM3P0DP25 149 aa26.31■■□□□ 1.8
IRF3-201ENST00000309877 CDC27P30260 824 aa26.31■■□□□ 1.8
IRF3-201ENST00000309877 NBPF9Q3BBW0 867 aa26.31■■□□□ 1.8
IRF3-201ENST00000309877 FAM151AQ8WW52 585 aa26.31■■□□□ 1.8
IRF3-201ENST00000309877 GBP4Q96PP9 640 aa26.31■■□□□ 1.8
IRF3-201ENST00000309877 KAT14Q9H8E8 782 aa26.31■■□□□ 1.8
IRF3-201ENST00000309877 NID2Q14112 1375 aa26.3■■□□□ 1.8
IRF3-201ENST00000309877 ATRNL1Q5VV63 1379 aa26.3■■□□□ 1.8
IRF3-201ENST00000309877 PPP2R5BQ15173 497 aa26.3■■□□□ 1.8
IRF3-201ENST00000309877 FANCBQ8NB91 859 aa26.3■■□□□ 1.8
IRF3-201ENST00000309877 ANKS1AQ92625 1134 aa26.3■■□□□ 1.8
IRF3-201ENST00000309877 COL2A1P02458 1487 aaPredicted RBP26.29■■□□□ 1.8
IRF3-201ENST00000309877 VPS37CA5D8V6 355 aaPredicted RBP26.29■■□□□ 1.8
IRF3-201ENST00000309877 PPFIA3O75145 1194 aa26.29■■□□□ 1.8
IRF3-201ENST00000309877 DDAH1O94760 285 aa26.29■■□□□ 1.8
IRF3-201ENST00000309877 ZSCAN22P10073 491 aaPredicted RBP26.29■■□□□ 1.8
IRF3-201ENST00000309877 SHMT1P34896 483 aa26.29■■□□□ 1.8
IRF3-201ENST00000309877 RCSD1Q6JBY9 416 aa26.29■■□□□ 1.8
IRF3-201ENST00000309877 RNF181Q9P0P0 153 aa26.29■■□□□ 1.8
IRF3-201ENST00000309877 GPC2Q8N158 579 aa26.28■■□□□ 1.8
IRF3-201ENST00000309877 CSRNP1Q96S65 589 aa26.28■■□□□ 1.8
IRF3-201ENST00000309877 FAM217BQ9NTX9 383 aaPredicted RBP26.28■■□□□ 1.8
IRF3-201ENST00000309877 H7C1D1 291 aa26.28■■□□□ 1.8
IRF3-201ENST00000309877 NBR1Q14596 966 aa26.28■■□□□ 1.8
IRF3-201ENST00000309877 ORC3Q9UBD5 711 aaPredicted RBP26.28■■□□□ 1.8
IRF3-201ENST00000309877 STX8Q9UNK0 236 aa26.28■■□□□ 1.8
IRF3-201ENST00000309877 SAMD7Q7Z3H4 446 aa26.27■■□□□ 1.8
IRF3-201ENST00000309877 CCDC17Q96LX7 622 aa26.27■■□□□ 1.8
IRF3-201ENST00000309877 MTMR6Q9Y217 621 aa26.27■■□□□ 1.8
IRF3-201ENST00000309877 H3BQV1 296 aa26.26■■□□□ 1.79
IRF3-201ENST00000309877 AKR1B1P15121 316 aa26.26■■□□□ 1.79
IRF3-201ENST00000309877 TROAPQ12815 778 aa26.26■■□□□ 1.79
IRF3-201ENST00000309877 TBC1D10BQ4KMP7 808 aaPredicted RBP26.26■■□□□ 1.79
IRF3-201ENST00000309877 IFFO2Q5TF58 517 aa26.26■■□□□ 1.79
IRF3-201ENST00000309877 FAM83AQ86UY5 434 aa26.26■■□□□ 1.79
IRF3-201ENST00000309877 RBM28Q9NW13 759 aaKnown RBP26.26■■□□□ 1.79
IRF3-201ENST00000309877 CNTNAP1P78357 1384 aa26.26■■□□□ 1.79
IRF3-201ENST00000309877 FDPSP14324 419 aaKnown RBP26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms