RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 NLRP2Q9NX02 1062 aa6.26□□□□□ -1.41
VPS50-202ENST00000305866 CCDC151A5D8V7 595 aa6.26□□□□□ -1.41
VPS50-202ENST00000305866 DHX16O60231 1041 aaKnown RBP6.26□□□□□ -1.41
VPS50-202ENST00000305866 UQCRFS1P1P0C7P4 283 aa6.26□□□□□ -1.41
VPS50-202ENST00000305866 CHRM1P11229 460 aaPredicted RBP6.26□□□□□ -1.41
VPS50-202ENST00000305866 TXLNAP40222 546 aa6.26□□□□□ -1.41
VPS50-202ENST00000305866 CEBPZQ03701 1054 aaKnown RBP6.26□□□□□ -1.41
VPS50-202ENST00000305866 CTDSPL2Q05D32 466 aa6.26□□□□□ -1.41
VPS50-202ENST00000305866 LONRF2Q1L5Z9 754 aa6.26□□□□□ -1.41
VPS50-202ENST00000305866 ZNF384Q8TF68 577 aa6.26□□□□□ -1.41
VPS50-202ENST00000305866 SH3GL2Q99962 352 aa6.26□□□□□ -1.41
VPS50-202ENST00000305866 ROBO3Q96MS0 1386 aa6.26□□□□□ -1.41
VPS50-202ENST00000305866 PPFIA3O75145 1194 aa6.25□□□□□ -1.41
VPS50-202ENST00000305866 MYL6BP14649 208 aa6.25□□□□□ -1.41
VPS50-202ENST00000305866 KCNJ4P48050 445 aa6.25□□□□□ -1.41
VPS50-202ENST00000305866 PIP4K2AP48426 406 aaPredicted RBP6.25□□□□□ -1.41
VPS50-202ENST00000305866 EIF5P55010 431 aaKnown RBP6.25□□□□□ -1.41
VPS50-202ENST00000305866 MYL5Q02045 173 aa6.25□□□□□ -1.41
VPS50-202ENST00000305866 GUCY1B3Q02153 619 aa6.25□□□□□ -1.41
VPS50-202ENST00000305866 CHAF1AQ13111 956 aaPredicted RBP6.25□□□□□ -1.41
VPS50-202ENST00000305866 SMC1AQ14683 1233 aaKnown RBP6.25□□□□□ -1.41
VPS50-202ENST00000305866 SEC23AQ15436 765 aa6.25□□□□□ -1.41
VPS50-202ENST00000305866 APOA5Q6Q788 366 aa6.25□□□□□ -1.41
VPS50-202ENST00000305866 PI16Q6UXB8 463 aa6.25□□□□□ -1.41
VPS50-202ENST00000305866 TRAPPC11Q7Z392 1133 aa6.25□□□□□ -1.41
VPS50-202ENST00000305866 VPS37DQ86XT2 251 aa6.25□□□□□ -1.41
VPS50-202ENST00000305866 PIGBQ92521 554 aa6.25□□□□□ -1.41
VPS50-202ENST00000305866 STRBPQ96SI9 672 aaKnown RBP6.25□□□□□ -1.41
VPS50-202ENST00000305866 XDHP47989 1333 aa6.25□□□□□ -1.41
VPS50-202ENST00000305866 SOWAHDA6NJG2 315 aa6.25□□□□□ -1.41
VPS50-202ENST00000305866 SMIM22K7EJ46 135 aa6.25□□□□□ -1.41
VPS50-202ENST00000305866 PDE8BO95263 885 aa6.25□□□□□ -1.41
VPS50-202ENST00000305866 LMOD1P29536 600 aaPredicted RBP6.25□□□□□ -1.41
VPS50-202ENST00000305866 FXR1P51114 621 aaKnown RBP eCLIP6.25□□□□□ -1.41
VPS50-202ENST00000305866 ZC3H6P61129 1189 aaKnown RBP6.25□□□□□ -1.41
VPS50-202ENST00000305866 PDXDC2PQ6P474 469 aa6.25□□□□□ -1.41
VPS50-202ENST00000305866 ZNF594Q96JF6 807 aaPredicted RBP6.25□□□□□ -1.41
VPS50-202ENST00000305866 UTP14AQ9BVJ6 771 aaKnown RBP6.25□□□□□ -1.41
VPS50-202ENST00000305866 INCENPQ9NQS7 918 aa6.25□□□□□ -1.41
VPS50-202ENST00000305866 SAMSN1Q9NSI8 373 aaKnown RBP6.25□□□□□ -1.41
VPS50-202ENST00000305866 TBC1D2BQ9UPU7 963 aa6.25□□□□□ -1.41
VPS50-202ENST00000305866 IFIT1P09914 478 aaKnown RBP6.25□□□□□ -1.41
VPS50-202ENST00000305866 MYBL2P10244 700 aa6.25□□□□□ -1.41
VPS50-202ENST00000305866 SLC10A5Q5PT55 438 aa6.25□□□□□ -1.41
VPS50-202ENST00000305866 NCOA7Q8NI08 942 aa6.25□□□□□ -1.41
VPS50-202ENST00000305866 OLIG1Q8TAK6 271 aa6.25□□□□□ -1.41
VPS50-202ENST00000305866 KAT2BQ92831 832 aa6.25□□□□□ -1.41
VPS50-202ENST00000305866 PIH1D3Q9NQM4 214 aaKnown RBP6.25□□□□□ -1.41
VPS50-202ENST00000305866 SLAIN2Q9P270 581 aa6.25□□□□□ -1.41
VPS50-202ENST00000305866 RCCD1A6NED2 376 aa6.24□□□□□ -1.41
VPS50-202ENST00000305866 GOLIM4O00461 696 aa6.24□□□□□ -1.41
VPS50-202ENST00000305866 PDE8AO60658 829 aa6.24□□□□□ -1.41
VPS50-202ENST00000305866 FMNL1O95466 1100 aaPredicted RBP6.24□□□□□ -1.41
VPS50-202ENST00000305866 VSNL1P62760 191 aa6.24□□□□□ -1.41
VPS50-202ENST00000305866 NOM1Q5C9Z4 860 aaKnown RBP6.24□□□□□ -1.41
VPS50-202ENST00000305866 KRT40Q6A162 431 aa6.24□□□□□ -1.41
VPS50-202ENST00000305866 DPY19L2P1Q6NXN4 242 aa6.24□□□□□ -1.41
VPS50-202ENST00000305866 INTS5Q6P9B9 1019 aaKnown RBP6.24□□□□□ -1.41
VPS50-202ENST00000305866 KCNV1Q6PIU1 500 aa6.24□□□□□ -1.41
VPS50-202ENST00000305866 NOA1Q8NC60 698 aaKnown RBP6.24□□□□□ -1.41
VPS50-202ENST00000305866 ADAMTSL1Q8N6G6 1762 aa6.24□□□□□ -1.41
VPS50-202ENST00000305866 MYO1CO00159 1063 aa6.24□□□□□ -1.41
VPS50-202ENST00000305866 EDIL3O43854 480 aa6.24□□□□□ -1.41
VPS50-202ENST00000305866 MMP1P03956 469 aa6.24□□□□□ -1.41
VPS50-202ENST00000305866 A1BGP04217 495 aa6.24□□□□□ -1.41
VPS50-202ENST00000305866 SLC3A2P08195 630 aaKnown RBP6.24□□□□□ -1.41
VPS50-202ENST00000305866 IFNAR1P17181 557 aa6.24□□□□□ -1.41
VPS50-202ENST00000305866 GNAT2P19087 354 aa6.24□□□□□ -1.41
VPS50-202ENST00000305866 NOVP48745 357 aa6.24□□□□□ -1.41
VPS50-202ENST00000305866 FNTAP49354 379 aa6.24□□□□□ -1.41
VPS50-202ENST00000305866 HERVK_113P62684 666 aa6.24□□□□□ -1.41
VPS50-202ENST00000305866 AIMP1Q12904 312 aaKnown RBP6.24□□□□□ -1.41
VPS50-202ENST00000305866 IMMTQ16891 758 aaKnown RBP6.24□□□□□ -1.41
VPS50-202ENST00000305866 TPRNQ4KMQ1 711 aa6.24□□□□□ -1.41
VPS50-202ENST00000305866 BARGINQ6ZT62 677 aa6.24□□□□□ -1.41
VPS50-202ENST00000305866 SRGAP1Q7Z6B7 1085 aa6.24□□□□□ -1.41
VPS50-202ENST00000305866 LPIN2Q92539 896 aa6.24□□□□□ -1.41
VPS50-202ENST00000305866 ANKS1AQ92625 1134 aa6.24□□□□□ -1.41
VPS50-202ENST00000305866 PAGR1Q9BTK6 254 aa6.24□□□□□ -1.41
VPS50-202ENST00000305866 LIMA1Q9UHB6 759 aaKnown RBP6.24□□□□□ -1.41
VPS50-202ENST00000305866 SLX4Q8IY92 1834 aa6.24□□□□□ -1.41
VPS50-202ENST00000305866 BTAF1O14981 1849 aa6.24□□□□□ -1.41
VPS50-202ENST00000305866 PRC1O43663 620 aa6.24□□□□□ -1.41
VPS50-202ENST00000305866 GSCP56915 257 aaPredicted RBP6.24□□□□□ -1.41
VPS50-202ENST00000305866 PPP2R3AQ06190 1150 aa6.24□□□□□ -1.41
VPS50-202ENST00000305866 MEA1Q16626 185 aa6.24□□□□□ -1.41
VPS50-202ENST00000305866 SLC35G1Q2M3R5 365 aa6.24□□□□□ -1.41
VPS50-202ENST00000305866 TRIML1Q8N9V2 468 aa6.24□□□□□ -1.41
VPS50-202ENST00000305866 GOLGA5Q8TBA6 731 aa6.24□□□□□ -1.41
VPS50-202ENST00000305866 FOXP1Q9H334 677 aaPredicted RBP6.24□□□□□ -1.41
VPS50-202ENST00000305866 ANGEL1Q9UNK9 670 aaKnown RBP6.24□□□□□ -1.41
VPS50-202ENST00000305866 FAM205CA6NFA0 338 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 PATL2C9JE40 543 aaKnown RBP6.23□□□□□ -1.41
VPS50-202ENST00000305866 ZNF263O14978 683 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 KINO60870 393 aaKnown RBP6.23□□□□□ -1.41
VPS50-202ENST00000305866 MFAP3LO75121 409 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 POLR3DP05423 398 aaPredicted RBP6.23□□□□□ -1.41
VPS50-202ENST00000305866 SLC5A1P13866 664 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 ADKP55263 362 aaKnown RBP6.23□□□□□ -1.41
VPS50-202ENST00000305866 BRD3Q15059 726 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms