RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 DTNBP1Q96EV8 351 aa12.35□□□□□ -0.43
HDGFL3-201ENST00000299633 APOA1P02647 267 aa12.35□□□□□ -0.43
HDGFL3-201ENST00000299633 TBC1D10BQ4KMP7 808 aaPredicted RBP12.35□□□□□ -0.43
HDGFL3-201ENST00000299633 NME8Q8N427 588 aa12.35□□□□□ -0.43
HDGFL3-201ENST00000299633 NBPF6Q5VWK0 638 aa12.35□□□□□ -0.43
HDGFL3-201ENST00000299633 TMX3Q96JJ7 454 aa12.35□□□□□ -0.43
HDGFL3-201ENST00000299633 NBPF4Q96M43 638 aa12.35□□□□□ -0.43
HDGFL3-201ENST00000299633 AKR1B15C9JRZ8 316 aaPredicted RBP12.35□□□□□ -0.43
HDGFL3-201ENST00000299633 SLC12A2P55011 1212 aa12.35□□□□□ -0.43
HDGFL3-201ENST00000299633 DPH6Q7L8W6 267 aa12.35□□□□□ -0.43
HDGFL3-201ENST00000299633 E2F4Q16254 413 aa12.35□□□□□ -0.43
HDGFL3-201ENST00000299633 GCC2Q8IWJ2 1684 aa12.35□□□□□ -0.43
HDGFL3-201ENST00000299633 MINDY4BA8MYZ0 360 aa12.35□□□□□ -0.43
HDGFL3-201ENST00000299633 TMTC4Q5T4D3 741 aa12.35□□□□□ -0.43
HDGFL3-201ENST00000299633 MRRFQ96E11 262 aaKnown RBP12.35□□□□□ -0.43
HDGFL3-201ENST00000299633 IFNKQ9P0W0 207 aa12.35□□□□□ -0.43
HDGFL3-201ENST00000299633 PPWD1Q96BP3 646 aaKnown RBP12.35□□□□□ -0.43
HDGFL3-201ENST00000299633 DCAF8L1A6NGE4 600 aa12.34□□□□□ -0.43
HDGFL3-201ENST00000299633 CARSP49589 748 aaKnown RBP12.34□□□□□ -0.43
HDGFL3-201ENST00000299633 COQ7Q99807 217 aa12.34□□□□□ -0.43
HDGFL3-201ENST00000299633 IL1RL1Q01638 556 aa12.34□□□□□ -0.43
HDGFL3-201ENST00000299633 ZGPATQ8N5A5 531 aaKnown RBP12.34□□□□□ -0.43
HDGFL3-201ENST00000299633 CEP78Q5JTW2 689 aa12.34□□□□□ -0.43
HDGFL3-201ENST00000299633 PLEKHA4Q9H4M7 779 aa12.34□□□□□ -0.43
HDGFL3-201ENST00000299633 POLR3DP05423 398 aaPredicted RBP12.34□□□□□ -0.43
HDGFL3-201ENST00000299633 RBM26Q5T8P6 1007 aaKnown RBP12.34□□□□□ -0.43
HDGFL3-201ENST00000299633 SEC16AO15027 2179 aa12.34□□□□□ -0.43
HDGFL3-201ENST00000299633 SYCE1LA8MT33 242 aa12.34□□□□□ -0.43
HDGFL3-201ENST00000299633 GNL1P36915 607 aaPredicted RBP12.34□□□□□ -0.43
HDGFL3-201ENST00000299633 OCA2Q04671 838 aa12.34□□□□□ -0.43
HDGFL3-201ENST00000299633 ARMCX6Q7L4S7 300 aa12.34□□□□□ -0.43
HDGFL3-201ENST00000299633 KIAA0100Q14667 2235 aaKnown RBP12.34□□□□□ -0.43
HDGFL3-201ENST00000299633 MYD88Q99836 296 aa12.34□□□□□ -0.43
HDGFL3-201ENST00000299633 ABCA10Q8WWZ4 1543 aa12.34□□□□□ -0.43
HDGFL3-201ENST00000299633 RAD51AP2Q09MP3 1159 aa12.34□□□□□ -0.43
HDGFL3-201ENST00000299633 ABCF2Q9UG63 623 aa12.34□□□□□ -0.43
HDGFL3-201ENST00000299633 GOLGA8KD6RF30 607 aa12.33□□□□□ -0.43
HDGFL3-201ENST00000299633 ANGPT1Q15389 498 aa12.33□□□□□ -0.43
HDGFL3-201ENST00000299633 PROSER2Q86WR7 435 aaPredicted RBP12.33□□□□□ -0.43
HDGFL3-201ENST00000299633 NLRP9Q7RTR0 991 aa12.33□□□□□ -0.44
HDGFL3-201ENST00000299633 IQCA1Q86XH1 822 aa12.33□□□□□ -0.44
HDGFL3-201ENST00000299633 KIFAP3Q92845 792 aa12.33□□□□□ -0.44
HDGFL3-201ENST00000299633 GFM2Q969S9 779 aaKnown RBP12.33□□□□□ -0.44
HDGFL3-201ENST00000299633 ZSCAN32Q9NX65 697 aa12.33□□□□□ -0.44
HDGFL3-201ENST00000299633 ZMYND8Q9ULU4 1186 aaPredicted RBP12.33□□□□□ -0.44
HDGFL3-201ENST00000299633 FMNL1O95466 1100 aaPredicted RBP12.33□□□□□ -0.44
HDGFL3-201ENST00000299633 AFMP43652 599 aa12.33□□□□□ -0.44
HDGFL3-201ENST00000299633 PTPRCP08575 1304 aa12.33□□□□□ -0.44
HDGFL3-201ENST00000299633 IGHMBP2P38935 993 aaKnown RBP12.33□□□□□ -0.44
HDGFL3-201ENST00000299633 ZC3H18Q86VM9 953 aaKnown RBP12.33□□□□□ -0.44
HDGFL3-201ENST00000299633 PALM2Q8IXS6 379 aa12.33□□□□□ -0.44
HDGFL3-201ENST00000299633 KRT15P19012 456 aa12.33□□□□□ -0.44
HDGFL3-201ENST00000299633 CCDC8Q9H0W5 538 aaPredicted RBP12.33□□□□□ -0.44
HDGFL3-201ENST00000299633 STX2P32856 288 aa12.33□□□□□ -0.44
HDGFL3-201ENST00000299633 NUDT16Q96DE0 195 aaKnown RBP12.33□□□□□ -0.44
HDGFL3-201ENST00000299633 SUN1O94901 812 aa12.33□□□□□ -0.44
HDGFL3-201ENST00000299633 CLSTN2Q9H4D0 955 aa12.33□□□□□ -0.44
HDGFL3-201ENST00000299633 ACBD5Q5T8D3 534 aaPredicted RBP12.33□□□□□ -0.44
HDGFL3-201ENST00000299633 KCNG4Q8TDN1 519 aa12.33□□□□□ -0.44
HDGFL3-201ENST00000299633 TMOD2Q9NZR1 351 aa12.33□□□□□ -0.44
HDGFL3-201ENST00000299633 ZNF711Q9Y462 761 aa12.33□□□□□ -0.44
HDGFL3-201ENST00000299633 CAPN9O14815 690 aa12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 GNGT2O14610 69 aa12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 TRIML2Q8N7C3 387 aa12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 NOX5Q96PH1 765 aa12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 ZNF229Q9UJW7 825 aa12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 GSTA1P08263 222 aa12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 GSTA2P09210 222 aa12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 TAF11Q15544 211 aa12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 SAAL1Q96ER3 474 aa12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 SLC24A3Q9HC58 644 aa12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 KRT82Q9NSB4 513 aa12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 PLB1Q6P1J6 1458 aa12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 MAN1A1P33908 653 aa12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 PHBP35232 272 aa12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 CRACR2BQ8N4Y2 399 aaPredicted RBP12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 PARP2Q9UGN5 583 aa12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 SPOPO43791 374 aa12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 SPZ1Q9BXG8 430 aa12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 RAB17Q9H0T7 212 aa12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 SLC52A1Q9NWF4 448 aa12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 TRIM14Q14142 442 aa12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 SART1O43290 800 aaKnown RBP12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 FOSL2P15408 326 aa12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 WAPLQ7Z5K2 1190 aa12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 CCDC13Q8IYE1 715 aa12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 LEO1Q8WVC0 666 aaPredicted RBP12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 KRT12Q99456 494 aa12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 RTL1A6NKG5 1358 aa12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 DDX28Q9NUL7 540 aaKnown RBP12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 DACT1Q9NYF0 836 aa12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 RANBP6O60518 1105 aaKnown RBP12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 TRPC1P48995 793 aa12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 RINLQ6ZS11 566 aa12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 ARIH1Q9Y4X5 557 aaPredicted RBP12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 ZNF449Q6P9G9 518 aa12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 NME9Q86XW9 330 aa12.32□□□□□ -0.44
HDGFL3-201ENST00000299633 GNGT1P63211 74 aa12.31□□□□□ -0.44
HDGFL3-201ENST00000299633 ASIC1P78348 528 aa12.31□□□□□ -0.44
HDGFL3-201ENST00000299633 PHKBQ93100 1093 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms