RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 PHKA1P46020 1223 aa15.17■□□□□ 0.02
SCAF4-201ENST00000286835 RABL6Q3YEC7 729 aaPredicted RBP15.17■□□□□ 0.02
SCAF4-201ENST00000286835 DEF6Q9H4E7 631 aa15.17■□□□□ 0.02
SCAF4-201ENST00000286835 SUGCTQ9HAC7 445 aa15.17■□□□□ 0.02
SCAF4-201ENST00000286835 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.17■□□□□ 0.02
SCAF4-201ENST00000286835 FAN1Q9Y2M0 1017 aa15.17■□□□□ 0.02
SCAF4-201ENST00000286835 PXDNQ92626 1479 aa15.17■□□□□ 0.02
SCAF4-201ENST00000286835 H7C1W4 665 aa15.17■□□□□ 0.02
SCAF4-201ENST00000286835 USP49Q70CQ1 688 aa15.17■□□□□ 0.02
SCAF4-201ENST00000286835 CCDC24Q8N4L8 307 aa15.17■□□□□ 0.02
SCAF4-201ENST00000286835 NAPGQ99747 312 aaPredicted RBP15.17■□□□□ 0.02
SCAF4-201ENST00000286835 V9GY48 417 aaPredicted RBP15.17■□□□□ 0.02
SCAF4-201ENST00000286835 WDR17Q8IZU2 1322 aa15.17■□□□□ 0.02
SCAF4-201ENST00000286835 PDE6AP16499 860 aa15.17■□□□□ 0.02
SCAF4-201ENST00000286835 KCNQ4P56696 695 aa15.17■□□□□ 0.02
SCAF4-201ENST00000286835 EPSTI1Q96J88 318 aa15.17■□□□□ 0.02
SCAF4-201ENST00000286835 ZSWIM5Q9P217 1185 aa15.17■□□□□ 0.02
SCAF4-201ENST00000286835 USP21Q9UK80 565 aa15.17■□□□□ 0.02
SCAF4-201ENST00000286835 SPATA31D1Q6ZQQ2 1576 aa15.16■□□□□ 0.02
SCAF4-201ENST00000286835 NBPF26B4DH59 902 aa15.16■□□□□ 0.02
SCAF4-201ENST00000286835 POTEB2H3BUK9 544 aa15.16■□□□□ 0.02
SCAF4-201ENST00000286835 GUCY1A2P33402 732 aa15.16■□□□□ 0.02
SCAF4-201ENST00000286835 NBPF14Q5TI25 921 aa15.16■□□□□ 0.02
SCAF4-201ENST00000286835 NBPF10Q6P3W6 841 aaKnown RBP15.16■□□□□ 0.02
SCAF4-201ENST00000286835 NBPF15Q8N660 670 aa15.16■□□□□ 0.02
SCAF4-201ENST00000286835 PRKAB2O43741 272 aa15.16■□□□□ 0.02
SCAF4-201ENST00000286835 TFRCP02786 760 aaKnown RBP15.16■□□□□ 0.02
SCAF4-201ENST00000286835 RESP18Q5W5W9 173 aa15.16■□□□□ 0.02
SCAF4-201ENST00000286835 MON2Q7Z3U7 1717 aa15.16■□□□□ 0.02
SCAF4-201ENST00000286835 KRT23Q9C075 422 aa15.16■□□□□ 0.02
SCAF4-201ENST00000286835 MRPL44Q9H9J2 332 aaKnown RBP15.16■□□□□ 0.02
SCAF4-201ENST00000286835 H0YHG0 523 aa15.16■□□□□ 0.02
SCAF4-201ENST00000286835 SH2B2O14492 632 aaPredicted RBP15.16■□□□□ 0.02
SCAF4-201ENST00000286835 IRS4O14654 1257 aaPredicted RBP15.16■□□□□ 0.02
SCAF4-201ENST00000286835 TRIM66O15016 1216 aa15.16■□□□□ 0.02
SCAF4-201ENST00000286835 ERCC3P19447 782 aa15.16■□□□□ 0.02
SCAF4-201ENST00000286835 MCAMP43121 646 aa15.16■□□□□ 0.02
SCAF4-201ENST00000286835 SRGAP1Q7Z6B7 1085 aa15.16■□□□□ 0.02
SCAF4-201ENST00000286835 CNGA4Q8IV77 575 aa15.16■□□□□ 0.02
SCAF4-201ENST00000286835 NOC3LQ8WTT2 800 aaKnown RBP15.16■□□□□ 0.02
SCAF4-201ENST00000286835 CTAGE1Q96RT6 745 aa15.16■□□□□ 0.02
SCAF4-201ENST00000286835 CENPHQ9H3R5 247 aa15.16■□□□□ 0.02
SCAF4-201ENST00000286835 GREM2Q9H772 168 aa15.16■□□□□ 0.02
SCAF4-201ENST00000286835 ENOX2Q16206 610 aaKnown RBP15.15■□□□□ 0.02
SCAF4-201ENST00000286835 PSMB7Q99436 277 aa15.15■□□□□ 0.02
SCAF4-201ENST00000286835 TRIM21P19474 475 aaKnown RBP15.15■□□□□ 0.02
SCAF4-201ENST00000286835 IBSPP21815 317 aaPredicted RBP15.15■□□□□ 0.02
SCAF4-201ENST00000286835 CCDC181Q5TID7 509 aa15.15■□□□□ 0.02
SCAF4-201ENST00000286835 TRIM65Q6PJ69 517 aa15.15■□□□□ 0.02
SCAF4-201ENST00000286835 CARD10Q9BWT7 1032 aa15.15■□□□□ 0.02
SCAF4-201ENST00000286835 ABCB6Q9NP58 842 aa15.15■□□□□ 0.02
SCAF4-201ENST00000286835 SLC5A1P13866 664 aa15.15■□□□□ 0.02
SCAF4-201ENST00000286835 CYP7A1P22680 504 aa15.15■□□□□ 0.02
SCAF4-201ENST00000286835 CCDC122Q5T0U0 273 aa15.15■□□□□ 0.02
SCAF4-201ENST00000286835 CATIPQ7Z7H3 387 aa15.15■□□□□ 0.02
SCAF4-201ENST00000286835 TRIM47Q96LD4 638 aa15.15■□□□□ 0.02
SCAF4-201ENST00000286835 MACROD2A1Z1Q3 448 aa15.14■□□□□ 0.01
SCAF4-201ENST00000286835 SASH3O75995 380 aa15.14■□□□□ 0.01
SCAF4-201ENST00000286835 TBC1D8O95759 1140 aa15.14■□□□□ 0.01
SCAF4-201ENST00000286835 CDC25AP30304 524 aa15.14■□□□□ 0.01
SCAF4-201ENST00000286835 FOXP4Q8IVH2 680 aaPredicted RBP15.14■□□□□ 0.01
SCAF4-201ENST00000286835 PIH1D3Q9NQM4 214 aaKnown RBP15.14■□□□□ 0.01
SCAF4-201ENST00000286835 CDC23Q9UJX2 597 aa15.14■□□□□ 0.01
SCAF4-201ENST00000286835 GNPATO15228 680 aa15.14■□□□□ 0.01
SCAF4-201ENST00000286835 NCAPH2Q6IBW4 605 aa15.14■□□□□ 0.01
SCAF4-201ENST00000286835 IFNL3Q8IZI9 196 aa15.14■□□□□ 0.01
SCAF4-201ENST00000286835 OXER1Q8TDS5 423 aa15.14■□□□□ 0.01
SCAF4-201ENST00000286835 MRFAP1Q9Y605 127 aa15.14■□□□□ 0.01
SCAF4-201ENST00000286835 NEDD4P46934 1319 aa15.14■□□□□ 0.01
SCAF4-201ENST00000286835 DEXIO95424 95 aa15.14■□□□□ 0.01
SCAF4-201ENST00000286835 STIM1Q13586 685 aa15.14■□□□□ 0.01
SCAF4-201ENST00000286835 FCHSD1Q86WN1 690 aa15.14■□□□□ 0.01
SCAF4-201ENST00000286835 TC2NQ8N9U0 490 aa15.14■□□□□ 0.01
SCAF4-201ENST00000286835 SETDB2Q96T68 719 aa15.14■□□□□ 0.01
SCAF4-201ENST00000286835 CNNM2Q9H8M5 875 aa15.14■□□□□ 0.01
SCAF4-201ENST00000286835 GPR108Q9NPR9 543 aa15.14■□□□□ 0.01
SCAF4-201ENST00000286835 TMEM51Q9NW97 253 aa15.14■□□□□ 0.01
SCAF4-201ENST00000286835 MARCH6O60337 910 aa15.14■□□□□ 0.01
SCAF4-201ENST00000286835 BRD3Q15059 726 aa15.14■□□□□ 0.01
SCAF4-201ENST00000286835 IFIT1BQ5T764 474 aaKnown RBP15.14■□□□□ 0.01
SCAF4-201ENST00000286835 CCDC47Q96A33 483 aaKnown RBP15.14■□□□□ 0.01
SCAF4-201ENST00000286835 PLCD1P51178 756 aa15.13■□□□□ 0.01
SCAF4-201ENST00000286835 IQCA1Q86XH1 822 aa15.13■□□□□ 0.01
SCAF4-201ENST00000286835 CTCFLQ8NI51 663 aaPredicted RBP15.13■□□□□ 0.01
SCAF4-201ENST00000286835 UBN2Q6ZU65 1347 aa15.13■□□□□ 0.01
SCAF4-201ENST00000286835 CCDC151A5D8V7 595 aa15.13■□□□□ 0.01
SCAF4-201ENST00000286835 ERVV-2B6SEH9 535 aa15.13■□□□□ 0.01
SCAF4-201ENST00000286835 CAVIN4Q5BKX8 364 aa15.13■□□□□ 0.01
SCAF4-201ENST00000286835 SDR42E1Q8WUS8 393 aa15.13■□□□□ 0.01
SCAF4-201ENST00000286835 TUBE1Q9UJT0 475 aa15.13■□□□□ 0.01
SCAF4-201ENST00000286835 PALLDQ8WX93 1383 aa15.13■□□□□ 0.01
SCAF4-201ENST00000286835 KRT2P35908 639 aa15.13■□□□□ 0.01
SCAF4-201ENST00000286835 TCIRG1Q13488 830 aa15.13■□□□□ 0.01
SCAF4-201ENST00000286835 MAP9Q49MG5 647 aa15.13■□□□□ 0.01
SCAF4-201ENST00000286835 AKNAD1Q5T1N1 836 aa15.13■□□□□ 0.01
SCAF4-201ENST00000286835 DHX37Q8IY37 1157 aaKnown RBP15.13■□□□□ 0.01
SCAF4-201ENST00000286835 SYMPKQ92797 1274 aaKnown RBP15.13■□□□□ 0.01
SCAF4-201ENST00000286835 TANGO6Q9C0B7 1094 aa15.13■□□□□ 0.01
SCAF4-201ENST00000286835 RNF41Q9H4P4 317 aaPredicted RBP15.13■□□□□ 0.01
SCAF4-201ENST00000286835 RICTORQ6R327 1708 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 157.3 ms