RNA–Protein interactions for RNA: ENST00000265565.9

SCAP-201, Transcript of SREBF chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAP, Length 4,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-201ENST00000265565 PCDH11XQ9BZA7 1347 aa18.64■□□□□ 0.57
SCAP-201ENST00000265565 PCDH11YQ9BZA8 1340 aa18.64■□□□□ 0.57
SCAP-201ENST00000265565 LONRF2Q1L5Z9 754 aa18.64■□□□□ 0.57
SCAP-201ENST00000265565 TMEM132AQ24JP5 1023 aa18.64■□□□□ 0.57
SCAP-201ENST00000265565 C8orf74Q6P047 294 aa18.64■□□□□ 0.57
SCAP-201ENST00000265565 RABGGTAQ92696 567 aa18.64■□□□□ 0.57
SCAP-201ENST00000265565 FERMT2Q96AC1 680 aa18.64■□□□□ 0.57
SCAP-201ENST00000265565 NLRP3Q96P20 1036 aa18.64■□□□□ 0.57
SCAP-201ENST00000265565 SAMSN1Q9NSI8 373 aaKnown RBP18.64■□□□□ 0.57
SCAP-201ENST00000265565 PNMA6AP0CW24 399 aaPredicted RBP18.63■□□□□ 0.57
SCAP-201ENST00000265565 MAGEA1P43355 309 aa18.63■□□□□ 0.57
SCAP-201ENST00000265565 IFI16Q16666 785 aaKnown RBP18.63■□□□□ 0.57
SCAP-201ENST00000265565 SARM1Q6SZW1 724 aa18.63■□□□□ 0.57
SCAP-201ENST00000265565 RAPGEF1Q13905 1077 aa18.63■□□□□ 0.57
SCAP-201ENST00000265565 SLC35F6Q8N357 371 aa18.63■□□□□ 0.57
SCAP-201ENST00000265565 SDR42E1Q8WUS8 393 aa18.63■□□□□ 0.57
SCAP-201ENST00000265565 SECISBP2LQ93073 1101 aaKnown RBP18.63■□□□□ 0.57
SCAP-201ENST00000265565 PUS7LQ9H0K6 701 aaKnown RBP18.63■□□□□ 0.57
SCAP-201ENST00000265565 FAM207AQ9NSI2 230 aaPredicted RBP18.63■□□□□ 0.57
SCAP-201ENST00000265565 ERCC6L2Q5T890 1561 aa18.62■□□□□ 0.57
SCAP-201ENST00000265565 PLCD1P51178 756 aa18.62■□□□□ 0.57
SCAP-201ENST00000265565 NR5A1Q13285 461 aa18.62■□□□□ 0.57
SCAP-201ENST00000265565 SPATA1Q5VX52 437 aa18.62■□□□□ 0.57
SCAP-201ENST00000265565 SHROOM2Q13796 1616 aa18.62■□□□□ 0.57
SCAP-201ENST00000265565 ATP10DQ9P241 1426 aa18.62■□□□□ 0.57
SCAP-201ENST00000265565 GOLGA6L10A0A0M3HER8 536 aa18.62■□□□□ 0.57
SCAP-201ENST00000265565 F8W031 263 aaPredicted RBP18.62■□□□□ 0.57
SCAP-201ENST00000265565 GCOM1H8Y6P7 765 aaPredicted RBP18.62■□□□□ 0.57
SCAP-201ENST00000265565 MYZAPP0CAP1 466 aa18.62■□□□□ 0.57
SCAP-201ENST00000265565 PHKA1P46020 1223 aa18.62■□□□□ 0.57
SCAP-201ENST00000265565 FAM47AQ5JRC9 791 aa18.62■□□□□ 0.57
SCAP-201ENST00000265565 PARD6BQ9BYG5 372 aa18.62■□□□□ 0.57
SCAP-201ENST00000265565 PRM3Q9NNZ6 103 aa18.62■□□□□ 0.57
SCAP-201ENST00000265565 FBXO3Q9UK99 471 aa18.62■□□□□ 0.57
SCAP-201ENST00000265565 ABCA6Q8N139 1617 aa18.62■□□□□ 0.57
SCAP-201ENST00000265565 ENC1O14682 589 aa18.62■□□□□ 0.57
SCAP-201ENST00000265565 CHGBP05060 677 aa18.62■□□□□ 0.57
SCAP-201ENST00000265565 TXKP42681 527 aa18.62■□□□□ 0.57
SCAP-201ENST00000265565 UIMC1Q96RL1 719 aa18.62■□□□□ 0.57
SCAP-201ENST00000265565 CDC23Q9UJX2 597 aa18.62■□□□□ 0.57
SCAP-201ENST00000265565 GYS2P54840 703 aa18.61■□□□□ 0.57
SCAP-201ENST00000265565 EPC1Q9H2F5 836 aa18.61■□□□□ 0.57
SCAP-201ENST00000265565 KCNJ18B7U540 433 aa18.61■□□□□ 0.57
SCAP-201ENST00000265565 GNA11P29992 359 aa18.61■□□□□ 0.57
SCAP-201ENST00000265565 KCNJ12Q14500 433 aa18.61■□□□□ 0.57
SCAP-201ENST00000265565 DYMQ7RTS9 669 aa18.61■□□□□ 0.57
SCAP-201ENST00000265565 CPLX4Q7Z7G2 160 aa18.61■□□□□ 0.57
SCAP-201ENST00000265565 SYCP3Q8IZU3 236 aa18.61■□□□□ 0.57
SCAP-201ENST00000265565 CSRNP2Q9H175 543 aa18.61■□□□□ 0.57
SCAP-201ENST00000265565 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.61■□□□□ 0.57
SCAP-201ENST00000265565 IQSEC2Q5JU85 1478 aa18.61■□□□□ 0.57
SCAP-201ENST00000265565 TBCAO75347 108 aaKnown RBP18.61■□□□□ 0.57
SCAP-201ENST00000265565 PICALMQ13492 652 aa18.61■□□□□ 0.57
SCAP-201ENST00000265565 CCDC121Q6ZUS5 278 aa18.61■□□□□ 0.57
SCAP-201ENST00000265565 SV2BQ7L1I2 683 aa18.61■□□□□ 0.57
SCAP-201ENST00000265565 RPGRQ92834 1020 aaKnown RBP18.61■□□□□ 0.57
SCAP-201ENST00000265565 CCDC114Q96M63 670 aa18.61■□□□□ 0.57
SCAP-201ENST00000265565 MLH3Q9UHC1 1453 aa18.61■□□□□ 0.57
SCAP-201ENST00000265565 SRGAP1Q7Z6B7 1085 aa18.6■□□□□ 0.57
SCAP-201ENST00000265565 TAOK3Q9H2K8 898 aa18.6■□□□□ 0.57
SCAP-201ENST00000265565 RGS22Q8NE09 1264 aa18.6■□□□□ 0.57
SCAP-201ENST00000265565 RRP36Q96EU6 259 aaKnown RBP18.6■□□□□ 0.57
SCAP-201ENST00000265565 ZCCHC17Q9NP64 241 aaKnown RBP18.6■□□□□ 0.57
SCAP-201ENST00000265565 AATFQ9NY61 560 aaKnown RBP eCLIP18.6■□□□□ 0.57
SCAP-201ENST00000265565 TAF6LQ9Y6J9 622 aa18.6■□□□□ 0.57
SCAP-201ENST00000265565 ZMYND10O75800 440 aa18.6■□□□□ 0.57
SCAP-201ENST00000265565 UBE4AQ14139 1066 aa18.6■□□□□ 0.57
SCAP-201ENST00000265565 MORC3Q14149 939 aa18.6■□□□□ 0.57
SCAP-201ENST00000265565 TYW1BQ6NUM6 668 aa18.6■□□□□ 0.57
SCAP-201ENST00000265565 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.6■□□□□ 0.57
SCAP-201ENST00000265565 TNKSO95271 1327 aa18.6■□□□□ 0.57
SCAP-201ENST00000265565 SOWAHDA6NJG2 315 aa18.59■□□□□ 0.57
SCAP-201ENST00000265565 USP17L12C9JPN9 530 aa18.59■□□□□ 0.57
SCAP-201ENST00000265565 USP17L21D6R901 530 aa18.59■□□□□ 0.57
SCAP-201ENST00000265565 KRT13P13646 458 aa18.59■□□□□ 0.57
SCAP-201ENST00000265565 ARHGEF25Q86VW2 580 aa18.59■□□□□ 0.57
SCAP-201ENST00000265565 VSTM4Q8IW00 320 aa18.59■□□□□ 0.57
SCAP-201ENST00000265565 ARFGAP2Q8N6H7 521 aa18.59■□□□□ 0.57
SCAP-201ENST00000265565 NLRC4Q9NPP4 1024 aa18.59■□□□□ 0.57
SCAP-201ENST00000265565 EPN1Q9Y6I3 576 aaPredicted RBP18.59■□□□□ 0.57
SCAP-201ENST00000265565 PPP6R2O75170 966 aa18.59■□□□□ 0.57
SCAP-201ENST00000265565 RBL2Q08999 1139 aa18.59■□□□□ 0.57
SCAP-201ENST00000265565 CETN1Q12798 172 aa18.59■□□□□ 0.57
SCAP-201ENST00000265565 SF3A3Q12874 501 aaKnown RBP eCLIP18.59■□□□□ 0.572e-8■■■■■ 52.3
SCAP-201ENST00000265565 PTGDRQ13258 359 aa18.59■□□□□ 0.57
SCAP-201ENST00000265565 WHAMMP3Q1A5X7 153 aa18.59■□□□□ 0.57
SCAP-201ENST00000265565 TRIML1Q8N9V2 468 aa18.59■□□□□ 0.57
SCAP-201ENST00000265565 SYMPKQ92797 1274 aaKnown RBP18.59■□□□□ 0.57
SCAP-201ENST00000265565 RNF17Q9BXT8 1623 aaKnown RBP18.59■□□□□ 0.57
SCAP-201ENST00000265565 ABCC3O15438 1527 aa18.59■□□□□ 0.57
SCAP-201ENST00000265565 HNRNPH2P55795 449 aaKnown RBP18.59■□□□□ 0.57
SCAP-201ENST00000265565 PPARAQ07869 468 aa18.59■□□□□ 0.57
SCAP-201ENST00000265565 C2CD5Q86YS7 1000 aa18.59■□□□□ 0.57
SCAP-201ENST00000265565 FMR1NBQ8N0W7 255 aaPredicted RBP18.59■□□□□ 0.57
SCAP-201ENST00000265565 GLI2P10070 1586 aa18.59■□□□□ 0.57
SCAP-201ENST00000265565 SPHKAPQ2M3C7 1700 aa18.59■□□□□ 0.57
SCAP-201ENST00000265565 CCNT1O60563 726 aaKnown RBP18.58■□□□□ 0.57
SCAP-201ENST00000265565 CCDC51Q96ER9 411 aa18.58■□□□□ 0.57
SCAP-201ENST00000265565 TSGA10Q9BZW7 698 aa18.58■□□□□ 0.57
SCAP-201ENST00000265565 GREM2Q9H772 168 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms