RNA–Protein interactions for RNA: ENST00000254853.9

SLC52A1-201, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-201ENST00000254853 ERICH2A1L162 156 aa19.55■□□□□ 0.72
SLC52A1-201ENST00000254853 MIGA1Q8NAN2 632 aa19.55■□□□□ 0.72
SLC52A1-201ENST00000254853 FANCBQ8NB91 859 aa19.55■□□□□ 0.72
SLC52A1-201ENST00000254853 CSRNP2Q9H175 543 aa19.55■□□□□ 0.72
SLC52A1-201ENST00000254853 CABP5Q9NP86 173 aa19.55■□□□□ 0.72
SLC52A1-201ENST00000254853 SAMSN1Q9NSI8 373 aaKnown RBP19.55■□□□□ 0.72
SLC52A1-201ENST00000254853 ARAP2Q8WZ64 1704 aa19.55■□□□□ 0.72
SLC52A1-201ENST00000254853 ERVV-1B6SEH8 477 aa19.54■□□□□ 0.72
SLC52A1-201ENST00000254853 STX10O60499 249 aa19.54■□□□□ 0.72
SLC52A1-201ENST00000254853 BCAMP50895 628 aa19.54■□□□□ 0.72
SLC52A1-201ENST00000254853 ZNF654Q8IZM8 581 aa19.54■□□□□ 0.72
SLC52A1-201ENST00000254853 WDR24Q96S15 920 aa19.54■□□□□ 0.72
SLC52A1-201ENST00000254853 PNPLA7Q6ZV29 1317 aa19.54■□□□□ 0.72
SLC52A1-201ENST00000254853 DOCK2Q92608 1830 aa19.54■□□□□ 0.72
SLC52A1-201ENST00000254853 PNMA6AP0CW24 399 aaPredicted RBP19.54■□□□□ 0.72
SLC52A1-201ENST00000254853 GNAT2P19087 354 aa19.54■□□□□ 0.72
SLC52A1-201ENST00000254853 GNG11P61952 73 aa19.54■□□□□ 0.72
SLC52A1-201ENST00000254853 TRIML1Q8N9V2 468 aa19.54■□□□□ 0.72
SLC52A1-201ENST00000254853 SLIT2O94813 1529 aa19.53■□□□□ 0.72
SLC52A1-201ENST00000254853 NUP98P52948 1817 aa19.53■□□□□ 0.72
SLC52A1-201ENST00000254853 CCDC196A0A1B0GTZ2 297 aa19.53■□□□□ 0.72
SLC52A1-201ENST00000254853 NUTM2AQ8IVF1 878 aaPredicted RBP19.53■□□□□ 0.72
SLC52A1-201ENST00000254853 MPHOSPH8Q99549 860 aa19.53■□□□□ 0.72
SLC52A1-201ENST00000254853 ABCA3Q99758 1704 aa19.53■□□□□ 0.72
SLC52A1-201ENST00000254853 ITGB4P16144 1822 aa19.53■□□□□ 0.72
SLC52A1-201ENST00000254853 XIRP1Q702N8 1843 aaKnown RBP19.53■□□□□ 0.72
SLC52A1-201ENST00000254853 FAM205CA6NFA0 338 aa19.52■□□□□ 0.72
SLC52A1-201ENST00000254853 EFCAB8A8MWE9 144 aa19.52■□□□□ 0.72
SLC52A1-201ENST00000254853 CASQ1P31415 396 aa19.52■□□□□ 0.72
SLC52A1-201ENST00000254853 PLCD1P51178 756 aa19.52■□□□□ 0.72
SLC52A1-201ENST00000254853 SHISA4Q96DD7 197 aa19.52■□□□□ 0.72
SLC52A1-201ENST00000254853 RAI14Q9P0K7 980 aa19.52■□□□□ 0.72
SLC52A1-201ENST00000254853 CEP131Q9UPN4 1083 aa19.52■□□□□ 0.72
SLC52A1-201ENST00000254853 BCL9O00512 1426 aa19.52■□□□□ 0.72
SLC52A1-201ENST00000254853 ZRANB2O95218 330 aaKnown RBP eCLIP19.52■□□□□ 0.72
SLC52A1-201ENST00000254853 SUSD4Q5VX71 490 aa19.52■□□□□ 0.72
SLC52A1-201ENST00000254853 KANK3Q6NY19 840 aa19.52■□□□□ 0.72
SLC52A1-201ENST00000254853 TMTC2Q8N394 836 aa19.52■□□□□ 0.72
SLC52A1-201ENST00000254853 ARGLU1Q9NWB6 273 aaPredicted RBP19.52■□□□□ 0.72
SLC52A1-201ENST00000254853 SLAIN2Q9P270 581 aa19.52■□□□□ 0.72
SLC52A1-201ENST00000254853 GOLGA6L9A6NEM1 432 aa19.51■□□□□ 0.71
SLC52A1-201ENST00000254853 NR1I3Q14994 352 aa19.51■□□□□ 0.71
SLC52A1-201ENST00000254853 TMCO3Q6UWJ1 677 aa19.51■□□□□ 0.71
SLC52A1-201ENST00000254853 SPATA20Q8TB22 786 aa19.51■□□□□ 0.71
SLC52A1-201ENST00000254853 DESI2Q9BSY9 194 aa19.51■□□□□ 0.71
SLC52A1-201ENST00000254853 EPC1Q9H2F5 836 aa19.51■□□□□ 0.71
SLC52A1-201ENST00000254853 PLA2G4AP47712 749 aa19.51■□□□□ 0.71
SLC52A1-201ENST00000254853 PPARAQ07869 468 aa19.51■□□□□ 0.71
SLC52A1-201ENST00000254853 DHX58Q96C10 678 aa19.51■□□□□ 0.71
SLC52A1-201ENST00000254853 UBAC1Q9BSL1 405 aa19.51■□□□□ 0.71
SLC52A1-201ENST00000254853 A0A087X0B3 334 aa19.5■□□□□ 0.71
SLC52A1-201ENST00000254853 SMIM22K7EJ46 135 aa19.5■□□□□ 0.71
SLC52A1-201ENST00000254853 IL6STP40189 918 aaPredicted RBP19.5■□□□□ 0.71
SLC52A1-201ENST00000254853 HSPA2P54652 639 aa19.5■□□□□ 0.71
SLC52A1-201ENST00000254853 MAP3K9P80192 1104 aa19.5■□□□□ 0.71
SLC52A1-201ENST00000254853 MTA3Q9BTC8 594 aa19.5■□□□□ 0.71
SLC52A1-201ENST00000254853 RNF41Q9H4P4 317 aaPredicted RBP19.5■□□□□ 0.71
SLC52A1-201ENST00000254853 LRP2BPQ9P2M1 347 aa19.5■□□□□ 0.71
SLC52A1-201ENST00000254853 MINDY4BA8MYZ0 360 aa19.5■□□□□ 0.71
SLC52A1-201ENST00000254853 ERCC5P28715 1186 aaPredicted RBP19.5■□□□□ 0.71
SLC52A1-201ENST00000254853 RCAN1P53805 252 aa19.5■□□□□ 0.71
SLC52A1-201ENST00000254853 EARS2Q5JPH6 523 aaKnown RBP19.5■□□□□ 0.71
SLC52A1-201ENST00000254853 KIFC2Q96AC6 838 aa19.5■□□□□ 0.71
SLC52A1-201ENST00000254853 VPS54Q9P1Q0 977 aa19.5■□□□□ 0.71
SLC52A1-201ENST00000254853 A0A1B0GTH6 734 aa19.49■□□□□ 0.71
SLC52A1-201ENST00000254853 TEX33O43247 280 aa19.49■□□□□ 0.71
SLC52A1-201ENST00000254853 SEC31AO94979 1220 aaKnown RBP19.49■□□□□ 0.71
SLC52A1-201ENST00000254853 MTF1Q14872 753 aa19.49■□□□□ 0.71
SLC52A1-201ENST00000254853 SEC23AQ15436 765 aa19.49■□□□□ 0.71
SLC52A1-201ENST00000254853 ADGRA1Q86SQ6 560 aa19.49■□□□□ 0.71
SLC52A1-201ENST00000254853 SDR42E1Q8WUS8 393 aa19.49■□□□□ 0.71
SLC52A1-201ENST00000254853 EPSTI1Q96J88 318 aa19.49■□□□□ 0.71
SLC52A1-201ENST00000254853 AK7Q96M32 723 aa19.49■□□□□ 0.71
SLC52A1-201ENST00000254853 NOL10Q9BSC4 688 aaKnown RBP19.49■□□□□ 0.71
SLC52A1-201ENST00000254853 TNKSO95271 1327 aa19.49■□□□□ 0.71
SLC52A1-201ENST00000254853 TRIM75PA6NK02 468 aa19.49■□□□□ 0.71
SLC52A1-201ENST00000254853 AFMP43652 599 aa19.49■□□□□ 0.71
SLC52A1-201ENST00000254853 KARSQ15046 597 aaKnown RBP19.49■□□□□ 0.71
SLC52A1-201ENST00000254853 RNF26Q9BY78 433 aaPredicted RBP19.49■□□□□ 0.71
SLC52A1-201ENST00000254853 AATFQ9NY61 560 aaKnown RBP eCLIP19.49■□□□□ 0.71
SLC52A1-201ENST00000254853 MRFAP1Q9Y605 127 aa19.49■□□□□ 0.71
SLC52A1-201ENST00000254853 BCORQ6W2J9 1755 aa19.49■□□□□ 0.71
SLC52A1-201ENST00000254853 hCG_1642624A0A1W2PR95 340 aa19.48■□□□□ 0.71
SLC52A1-201ENST00000254853 TPM1P09493 284 aa19.48■□□□□ 0.71
SLC52A1-201ENST00000254853 CD44P16070 742 aaKnown RBP19.48■□□□□ 0.71
SLC52A1-201ENST00000254853 CYP7A1P22680 504 aa19.48■□□□□ 0.71
SLC52A1-201ENST00000254853 CASP1P29466 404 aa19.48■□□□□ 0.71
SLC52A1-201ENST00000254853 APTXQ7Z2E3 356 aaKnown RBP19.48■□□□□ 0.71
SLC52A1-201ENST00000254853 MRPL44Q9H9J2 332 aaKnown RBP19.48■□□□□ 0.71
SLC52A1-201ENST00000254853 IQSEC3Q9UPP2 1182 aaPredicted RBP19.48■□□□□ 0.71
SLC52A1-201ENST00000254853 PRDM1O75626 825 aa19.48■□□□□ 0.71
SLC52A1-201ENST00000254853 STX17P56962 302 aa19.48■□□□□ 0.71
SLC52A1-201ENST00000254853 AKAP17AQ02040 695 aaKnown RBP19.48■□□□□ 0.71
SLC52A1-201ENST00000254853 PPP2R3AQ06190 1150 aa19.48■□□□□ 0.71
SLC52A1-201ENST00000254853 PKN1Q16512 942 aa19.48■□□□□ 0.71
SLC52A1-201ENST00000254853 KLHL10Q6JEL2 608 aa19.48■□□□□ 0.71
SLC52A1-201ENST00000254853 BTG4Q9NY30 223 aa19.48■□□□□ 0.71
SLC52A1-201ENST00000254853 SOWAHDA6NJG2 315 aa19.47■□□□□ 0.71
SLC52A1-201ENST00000254853 AKR1B15C9JRZ8 316 aaPredicted RBP19.47■□□□□ 0.71
SLC52A1-201ENST00000254853 PAGE5Q96GU1 130 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms