RNA–Protein interactions for RNA: ENST00000252542.8

SAFB2-201, Transcript of scaffold attachment factor B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAFB2, Length 3,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-201ENST00000252542 TSPY3P0CV98 308 aa17.24■□□□□ 0.35
SAFB2-201ENST00000252542 TSPY8P0CW00 308 aa17.24■□□□□ 0.35
SAFB2-201ENST00000252542 GPIHBP1Q8IV16 184 aa17.24■□□□□ 0.35
SAFB2-201ENST00000252542 KRI1Q8N9T8 703 aaKnown RBP17.24■□□□□ 0.35
SAFB2-201ENST00000252542 BLZF1Q9H2G9 400 aa17.24■□□□□ 0.35
SAFB2-201ENST00000252542 CRACR2BQ8N4Y2 399 aaPredicted RBP17.24■□□□□ 0.35
SAFB2-201ENST00000252542 NYXQ9GZU5 481 aa17.24■□□□□ 0.35
SAFB2-201ENST00000252542 BRMS1Q9HCU9 246 aa17.24■□□□□ 0.35
SAFB2-201ENST00000252542 JCADQ9P266 1359 aa17.23■□□□□ 0.35
SAFB2-201ENST00000252542 SALL1Q9NSC2 1324 aa17.23■□□□□ 0.35
SAFB2-201ENST00000252542 YEATS4O95619 227 aa17.23■□□□□ 0.35
SAFB2-201ENST00000252542 CTR9Q6PD62 1173 aa17.23■□□□□ 0.35
SAFB2-201ENST00000252542 POLR3EQ9NVU0 708 aa17.23■□□□□ 0.35
SAFB2-201ENST00000252542 USP27XA6NNY8 438 aa17.23■□□□□ 0.35
SAFB2-201ENST00000252542 DEXIO95424 95 aa17.23■□□□□ 0.35
SAFB2-201ENST00000252542 ERCC3P19447 782 aa17.23■□□□□ 0.35
SAFB2-201ENST00000252542 UBASH3AP57075 661 aa17.23■□□□□ 0.35
SAFB2-201ENST00000252542 CCDC112Q8NEF3 446 aa17.23■□□□□ 0.35
SAFB2-201ENST00000252542 ENGASEQ8NFI3 743 aa17.23■□□□□ 0.35
SAFB2-201ENST00000252542 MPHOSPH10O00566 681 aaKnown RBP17.23■□□□□ 0.35
SAFB2-201ENST00000252542 SLURP2P0DP57 97 aa17.23■□□□□ 0.35
SAFB2-201ENST00000252542 PDE4BQ07343 736 aa17.23■□□□□ 0.35
SAFB2-201ENST00000252542 DOK7Q18PE1 504 aa17.23■□□□□ 0.35
SAFB2-201ENST00000252542 CCAR2Q8N163 923 aaKnown RBP17.23■□□□□ 0.35
SAFB2-201ENST00000252542 THRAP3Q9Y2W1 955 aaKnown RBP17.23■□□□□ 0.35
SAFB2-201ENST00000252542 SCNN1DP51172 638 aa17.22■□□□□ 0.35
SAFB2-201ENST00000252542 SH3RF3Q8TEJ3 882 aaPredicted RBP17.22■□□□□ 0.35
SAFB2-201ENST00000252542 NARFQ9UHQ1 456 aa17.22■□□□□ 0.35
SAFB2-201ENST00000252542 EARS2Q5JPH6 523 aaKnown RBP17.22■□□□□ 0.35
SAFB2-201ENST00000252542 SEPT12Q8IYM1 358 aa17.22■□□□□ 0.35
SAFB2-201ENST00000252542 TDRD7Q8NHU6 1098 aaKnown RBP17.22■□□□□ 0.35
SAFB2-201ENST00000252542 ZNF622Q969S3 477 aaKnown RBP eCLIP17.22■□□□□ 0.352e-8■■■□□ 16.8
SAFB2-201ENST00000252542 MXD3Q9BW11 206 aa17.22■□□□□ 0.35
SAFB2-201ENST00000252542 CSRNP2Q9H175 543 aa17.22■□□□□ 0.35
SAFB2-201ENST00000252542 FANCLQ9NW38 375 aa17.22■□□□□ 0.35
SAFB2-201ENST00000252542 TRIM75PA6NK02 468 aa17.22■□□□□ 0.35
SAFB2-201ENST00000252542 RPS6KA4O75676 772 aa17.22■□□□□ 0.35
SAFB2-201ENST00000252542 IQCB1Q15051 598 aa17.22■□□□□ 0.35
SAFB2-201ENST00000252542 NTRK3Q16288 839 aa17.22■□□□□ 0.35
SAFB2-201ENST00000252542 CLEC10AQ8IUN9 316 aa17.22■□□□□ 0.35
SAFB2-201ENST00000252542 SPTLC3Q9NUV7 552 aa17.22■□□□□ 0.35
SAFB2-201ENST00000252542 FMNL1O95466 1100 aaPredicted RBP17.21■□□□□ 0.35
SAFB2-201ENST00000252542 TPM3P06753 285 aa17.21■□□□□ 0.35
SAFB2-201ENST00000252542 PRR29P0C7W0 189 aa17.21■□□□□ 0.35
SAFB2-201ENST00000252542 IFNAR1P17181 557 aa17.21■□□□□ 0.35
SAFB2-201ENST00000252542 SFPQP23246 707 aaKnown RBP eCLIP17.21■□□□□ 0.35
SAFB2-201ENST00000252542 CMA1P23946 247 aa17.21■□□□□ 0.35
SAFB2-201ENST00000252542 GTF2IP78347 998 aa17.21■□□□□ 0.35
SAFB2-201ENST00000252542 NSUN4Q96CB9 384 aaKnown RBP17.21■□□□□ 0.35
SAFB2-201ENST00000252542 DCP1AQ9NPI6 582 aaPredicted RBP17.21■□□□□ 0.35
SAFB2-201ENST00000252542 CGNQ9P2M7 1197 aaKnown RBP17.21■□□□□ 0.35
SAFB2-201ENST00000252542 AXDND1Q5T1B0 1012 aaPredicted RBP17.21■□□□□ 0.35
SAFB2-201ENST00000252542 ZSCAN29Q8IWY8 852 aaPredicted RBP17.21■□□□□ 0.35
SAFB2-201ENST00000252542 DHX40Q8IX18 779 aaKnown RBP17.21■□□□□ 0.35
SAFB2-201ENST00000252542 NRDCO43847 1150 aa17.2■□□□□ 0.34
SAFB2-201ENST00000252542 MMP1P03956 469 aa17.2■□□□□ 0.34
SAFB2-201ENST00000252542 LIFRP42702 1097 aa17.2■□□□□ 0.34
SAFB2-201ENST00000252542 STAG1Q8WVM7 1258 aa17.2■□□□□ 0.34
SAFB2-201ENST00000252542 USP54Q70EL1 1684 aa17.2■□□□□ 0.34
SAFB2-201ENST00000252542 CLEC4GQ6UXB4 293 aa17.2■□□□□ 0.34
SAFB2-201ENST00000252542 TMTC2Q8N394 836 aa17.2■□□□□ 0.34
SAFB2-201ENST00000252542 STAG2Q8N3U4 1231 aa17.2■□□□□ 0.34
SAFB2-201ENST00000252542 SMARCE1Q969G3 411 aa17.2■□□□□ 0.34
SAFB2-201ENST00000252542 UBA5Q9GZZ9 404 aa17.2■□□□□ 0.34
SAFB2-201ENST00000252542 MFSD14BQ5SR56 506 aa17.2■□□□□ 0.34
SAFB2-201ENST00000252542 KRT2P35908 639 aa17.19■□□□□ 0.34
SAFB2-201ENST00000252542 ZNF384Q8TF68 577 aa17.19■□□□□ 0.34
SAFB2-201ENST00000252542 MARCH6O60337 910 aa17.19■□□□□ 0.34
SAFB2-201ENST00000252542 FANCCQ00597 558 aa17.19■□□□□ 0.34
SAFB2-201ENST00000252542 SIPA1L3O60292 1781 aaPredicted RBP17.19■□□□□ 0.34
SAFB2-201ENST00000252542 MAPK8IP2Q13387 824 aaPredicted RBP17.19■□□□□ 0.34
SAFB2-201ENST00000252542 PTPN14Q15678 1187 aa17.19■□□□□ 0.34
SAFB2-201ENST00000252542 NBPF11Q86T75 865 aa17.19■□□□□ 0.34
SAFB2-201ENST00000252542 TEX11Q8IYF3 940 aa17.19■□□□□ 0.34
SAFB2-201ENST00000252542 DPF2Q92785 391 aa17.19■□□□□ 0.34
SAFB2-201ENST00000252542 RIOK1Q9BRS2 568 aaKnown RBP17.19■□□□□ 0.34
SAFB2-201ENST00000252542 TCP10Q12799 353 aa17.18■□□□□ 0.34
SAFB2-201ENST00000252542 ANKRD2Q9GZV1 360 aa17.18■□□□□ 0.34
SAFB2-201ENST00000252542 TOB1P50616 345 aaPredicted RBP17.18■□□□□ 0.34
SAFB2-201ENST00000252542 CACNB3P54284 484 aa17.18■□□□□ 0.34
SAFB2-201ENST00000252542 HOOK1Q9UJC3 728 aaKnown RBP17.18■□□□□ 0.34
SAFB2-201ENST00000252542 TMEM232C9JQI7 657 aa17.17■□□□□ 0.34
SAFB2-201ENST00000252542 WNT7AO00755 349 aa17.17■□□□□ 0.34
SAFB2-201ENST00000252542 SGMS1Q86VZ5 419 aa17.17■□□□□ 0.34
SAFB2-201ENST00000252542 LRRC8AQ8IWT6 810 aa17.17■□□□□ 0.34
SAFB2-201ENST00000252542 ZNF512BQ96KM6 892 aaPredicted RBP17.17■□□□□ 0.34
SAFB2-201ENST00000252542 ERICH4A6NGS2 130 aa17.17■□□□□ 0.34
SAFB2-201ENST00000252542 FAM196BA6NMK8 535 aa17.17■□□□□ 0.34
SAFB2-201ENST00000252542 SERPINB2P05120 415 aa17.17■□□□□ 0.34
SAFB2-201ENST00000252542 TOP1P11387 765 aaKnown RBP17.17■□□□□ 0.34
SAFB2-201ENST00000252542 GTF2F1P35269 517 aaKnown RBP eCLIP17.17■□□□□ 0.34
SAFB2-201ENST00000252542 PLCD1P51178 756 aa17.17■□□□□ 0.34
SAFB2-201ENST00000252542 NLRP12P59046 1061 aa17.17■□□□□ 0.34
SAFB2-201ENST00000252542 PTGDRQ13258 359 aa17.17■□□□□ 0.34
SAFB2-201ENST00000252542 SF3B3Q15393 1217 aaKnown RBP17.17■□□□□ 0.34
SAFB2-201ENST00000252542 ATL3Q6DD88 541 aa17.17■□□□□ 0.34
SAFB2-201ENST00000252542 PNMA1Q8ND90 353 aa17.17■□□□□ 0.34
SAFB2-201ENST00000252542 GTPBP4Q9BZE4 634 aaKnown RBP17.17■□□□□ 0.34
SAFB2-201ENST00000252542 NFE2L3Q9Y4A8 694 aa17.17■□□□□ 0.34
SAFB2-201ENST00000252542 SMTNL1A8MU46 457 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms