RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 LRRC37A3O60309 1634 aa19.17■□□□□ 0.66
SGPP1-201ENST00000247225 STX10O60499 249 aa19.17■□□□□ 0.66
SGPP1-201ENST00000247225 CD44P16070 742 aaKnown RBP19.17■□□□□ 0.66
SGPP1-201ENST00000247225 DNA2P51530 1060 aa19.17■□□□□ 0.66
SGPP1-201ENST00000247225 HSP90B2PQ58FF3 399 aa19.17■□□□□ 0.66
SGPP1-201ENST00000247225 TMEM139Q8IV31 216 aa19.17■□□□□ 0.66
SGPP1-201ENST00000247225 FAN1Q9Y2M0 1017 aa19.17■□□□□ 0.66
SGPP1-201ENST00000247225 MCM7P33993 719 aa19.17■□□□□ 0.66
SGPP1-201ENST00000247225 LCORLQ8N3X6 602 aa19.17■□□□□ 0.66
SGPP1-201ENST00000247225 MED15Q96RN5 788 aa19.17■□□□□ 0.66
SGPP1-201ENST00000247225 DACH1Q9UI36 760 aa19.17■□□□□ 0.66
SGPP1-201ENST00000247225 SRGAP2O75044 1071 aa19.17■□□□□ 0.66
SGPP1-201ENST00000247225 MATR3P43243 847 aaKnown RBP eCLIP19.17■□□□□ 0.66
SGPP1-201ENST00000247225 MAP3K12Q12852 859 aa19.17■□□□□ 0.66
SGPP1-201ENST00000247225 EARS2Q5JPH6 523 aaKnown RBP19.17■□□□□ 0.66
SGPP1-201ENST00000247225 TTLL11Q8NHH1 800 aa19.17■□□□□ 0.66
SGPP1-201ENST00000247225 STRBPQ96SI9 672 aaKnown RBP19.17■□□□□ 0.66
SGPP1-201ENST00000247225 PNKPQ96T60 521 aa19.17■□□□□ 0.66
SGPP1-201ENST00000247225 SYMPKQ92797 1274 aaKnown RBP19.16■□□□□ 0.66
SGPP1-201ENST00000247225 PSMB7Q99436 277 aa19.16■□□□□ 0.66
SGPP1-201ENST00000247225 EPB41L4AQ9HCS5 686 aaPredicted RBP19.16■□□□□ 0.66
SGPP1-201ENST00000247225 HDAC6Q9UBN7 1215 aa19.16■□□□□ 0.66
SGPP1-201ENST00000247225 TOPAZ1Q8N9V7 1692 aa19.16■□□□□ 0.66
SGPP1-201ENST00000247225 FXR1P51114 621 aaKnown RBP eCLIP19.16■□□□□ 0.66
SGPP1-201ENST00000247225 TRIM75PA6NK02 468 aa19.15■□□□□ 0.66
SGPP1-201ENST00000247225 TXLNAP40222 546 aa19.15■□□□□ 0.66
SGPP1-201ENST00000247225 NTRK3Q16288 839 aa19.15■□□□□ 0.66
SGPP1-201ENST00000247225 LEKR1Q6ZMV7 388 aa19.15■□□□□ 0.66
SGPP1-201ENST00000247225 MLKLQ8NB16 471 aa19.15■□□□□ 0.66
SGPP1-201ENST00000247225 TACC3Q9Y6A5 838 aa19.15■□□□□ 0.66
SGPP1-201ENST00000247225 SYNRGQ9UMZ2 1314 aa19.15■□□□□ 0.66
SGPP1-201ENST00000247225 A0A087X0B3 334 aa19.15■□□□□ 0.66
SGPP1-201ENST00000247225 CTAGE9A4FU28 777 aa19.15■□□□□ 0.66
SGPP1-201ENST00000247225 WTIPA6NIX2 430 aaPredicted RBP19.15■□□□□ 0.66
SGPP1-201ENST00000247225 MMP1P03956 469 aa19.15■□□□□ 0.66
SGPP1-201ENST00000247225 FOXR1Q6PIV2 292 aa19.15■□□□□ 0.66
SGPP1-201ENST00000247225 GSPT2Q8IYD1 628 aaKnown RBP19.15■□□□□ 0.66
SGPP1-201ENST00000247225 TXLNBQ8N3L3 684 aa19.15■□□□□ 0.66
SGPP1-201ENST00000247225 FBXO2Q9UK22 296 aaPredicted RBP19.15■□□□□ 0.66
SGPP1-201ENST00000247225 WNT7AO00755 349 aa19.14■□□□□ 0.65
SGPP1-201ENST00000247225 AKNAD1Q5T1N1 836 aa19.14■□□□□ 0.65
SGPP1-201ENST00000247225 CAGE1Q8TC20 777 aa19.14■□□□□ 0.65
SGPP1-201ENST00000247225 FUT8Q9BYC5 575 aa19.14■□□□□ 0.65
SGPP1-201ENST00000247225 CIAO1O76071 339 aa19.14■□□□□ 0.65
SGPP1-201ENST00000247225 CYP7A1P22680 504 aa19.14■□□□□ 0.65
SGPP1-201ENST00000247225 TMEM87BQ96K49 555 aa19.14■□□□□ 0.65
SGPP1-201ENST00000247225 NACAP1Q9BZK3 213 aa19.14■□□□□ 0.65
SGPP1-201ENST00000247225 ADGRG1Q9Y653 693 aa19.14■□□□□ 0.65
SGPP1-201ENST00000247225 KRT9P35527 623 aa19.13■□□□□ 0.65
SGPP1-201ENST00000247225 DNAJC21Q5F1R6 531 aaKnown RBP19.13■□□□□ 0.65
SGPP1-201ENST00000247225 SPATA5Q8NB90 893 aa19.13■□□□□ 0.65
SGPP1-201ENST00000247225 PTPREP23469 700 aa19.13■□□□□ 0.65
SGPP1-201ENST00000247225 RASGRF1Q13972 1273 aa19.13■□□□□ 0.65
SGPP1-201ENST00000247225 ZNF654Q8IZM8 581 aa19.13■□□□□ 0.65
SGPP1-201ENST00000247225 RIN2Q8WYP3 895 aaPredicted RBP19.13■□□□□ 0.65
SGPP1-201ENST00000247225 LTN1O94822 1766 aa19.13■□□□□ 0.65
SGPP1-201ENST00000247225 RILPL1Q5EBL4 403 aa19.13■□□□□ 0.65
SGPP1-201ENST00000247225 FANCBQ8NB91 859 aa19.13■□□□□ 0.65
SGPP1-201ENST00000247225 NOA1Q8NC60 698 aaKnown RBP19.13■□□□□ 0.65
SGPP1-201ENST00000247225 RABGGTAQ92696 567 aa19.13■□□□□ 0.65
SGPP1-201ENST00000247225 CTAGE15A4D2H0 777 aa19.12■□□□□ 0.65
SGPP1-201ENST00000247225 PLEKHA8P1O95397 391 aa19.12■□□□□ 0.65
SGPP1-201ENST00000247225 CTAGE8P0CG41 777 aa19.12■□□□□ 0.65
SGPP1-201ENST00000247225 VSNL1P62760 191 aa19.12■□□□□ 0.65
SGPP1-201ENST00000247225 UBXN1Q04323 297 aa19.12■□□□□ 0.65
SGPP1-201ENST00000247225 PIK3AP1Q6ZUJ8 805 aa19.12■□□□□ 0.65
SGPP1-201ENST00000247225 CTAGE6Q86UF2 777 aa19.12■□□□□ 0.65
SGPP1-201ENST00000247225 CTAGE4Q8IX94 777 aa19.12■□□□□ 0.65
SGPP1-201ENST00000247225 ENOX1Q8TC92 643 aaKnown RBP19.12■□□□□ 0.65
SGPP1-201ENST00000247225 WASF1Q92558 559 aa19.12■□□□□ 0.65
SGPP1-201ENST00000247225 CHP1Q99653 195 aa19.12■□□□□ 0.65
SGPP1-201ENST00000247225 GOLGA6L9A6NEM1 432 aa19.12■□□□□ 0.65
SGPP1-201ENST00000247225 RNF225M0QZC1 329 aaPredicted RBP19.12■□□□□ 0.65
SGPP1-201ENST00000247225 PDE8BO95263 885 aa19.12■□□□□ 0.65
SGPP1-201ENST00000247225 RIPOR2Q9Y4F9 1068 aa19.12■□□□□ 0.65
SGPP1-201ENST00000247225 SLIT1O75093 1534 aa19.12■□□□□ 0.65
SGPP1-201ENST00000247225 PATL2C9JE40 543 aaKnown RBP19.12■□□□□ 0.65
SGPP1-201ENST00000247225 FMNL1O95466 1100 aaPredicted RBP19.12■□□□□ 0.65
SGPP1-201ENST00000247225 PLCD1P51178 756 aa19.12■□□□□ 0.65
SGPP1-201ENST00000247225 TTF1Q15361 905 aaPredicted RBP19.12■□□□□ 0.65
SGPP1-201ENST00000247225 SRGAP1Q7Z6B7 1085 aa19.12■□□□□ 0.65
SGPP1-201ENST00000247225 RASGRP4Q8TDF6 673 aa19.12■□□□□ 0.65
SGPP1-201ENST00000247225 KIFC2Q96AC6 838 aa19.12■□□□□ 0.65
SGPP1-201ENST00000247225 POLD4Q9HCU8 107 aa19.12■□□□□ 0.65
SGPP1-201ENST00000247225 RFX7Q2KHR2 1363 aa19.11■□□□□ 0.65
SGPP1-201ENST00000247225 TULP1O00294 542 aaPredicted RBP19.11■□□□□ 0.65
SGPP1-201ENST00000247225 FAM47AQ5JRC9 791 aa19.11■□□□□ 0.65
SGPP1-201ENST00000247225 ZBTB38Q8NAP3 1195 aaPredicted RBP19.11■□□□□ 0.65
SGPP1-201ENST00000247225 FAM53CQ9NYF3 392 aa19.11■□□□□ 0.65
SGPP1-201ENST00000247225 FAM170AA1A519 330 aa19.11■□□□□ 0.65
SGPP1-201ENST00000247225 NMT2O60551 498 aa19.11■□□□□ 0.65
SGPP1-201ENST00000247225 GOLGA6L1Q8N7Z2 621 aa19.11■□□□□ 0.65
SGPP1-201ENST00000247225 GDAQ9Y2T3 454 aa19.11■□□□□ 0.65
SGPP1-201ENST00000247225 TRIM49BA6NDI0 452 aa19.1■□□□□ 0.65
SGPP1-201ENST00000247225 EVX2Q03828 476 aa19.1■□□□□ 0.65
SGPP1-201ENST00000247225 MORC3Q14149 939 aa19.1■□□□□ 0.65
SGPP1-201ENST00000247225 NR1I3Q14994 352 aa19.1■□□□□ 0.65
SGPP1-201ENST00000247225 TTC19Q6DKK2 380 aaPredicted RBP19.1■□□□□ 0.65
SGPP1-201ENST00000247225 CRACR2BQ8N4Y2 399 aaPredicted RBP19.1■□□□□ 0.65
SGPP1-201ENST00000247225 PAGE5Q96GU1 130 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms