RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 SEC31AO94979 1220 aaKnown RBP13.69□□□□□ -0.22
SEC61A1-201ENST00000243253 CTSWP56202 376 aa13.69□□□□□ -0.22
SEC61A1-201ENST00000243253 FUT2Q10981 343 aa13.69□□□□□ -0.22
SEC61A1-201ENST00000243253 PCDHB6Q9Y5E3 794 aa13.69□□□□□ -0.22
SEC61A1-201ENST00000243253 ROBO1Q9Y6N7 1651 aa13.69□□□□□ -0.22
SEC61A1-201ENST00000243253 PATL2C9JE40 543 aaKnown RBP13.69□□□□□ -0.22
SEC61A1-201ENST00000243253 PRDM1O75626 825 aa13.69□□□□□ -0.22
SEC61A1-201ENST00000243253 CD44P16070 742 aaKnown RBP13.69□□□□□ -0.22
SEC61A1-201ENST00000243253 TPM4P67936 248 aa13.69□□□□□ -0.22
SEC61A1-201ENST00000243253 CFAP100Q494V2 611 aa13.69□□□□□ -0.22
SEC61A1-201ENST00000243253 CDKAL1Q5VV42 579 aa13.69□□□□□ -0.22
SEC61A1-201ENST00000243253 SPECC1LQ69YQ0 1117 aa13.69□□□□□ -0.22
SEC61A1-201ENST00000243253 IFNL3Q8IZI9 196 aa13.69□□□□□ -0.22
SEC61A1-201ENST00000243253 BAG1Q99933 345 aaPredicted RBP13.69□□□□□ -0.22
SEC61A1-201ENST00000243253 FUT8Q9BYC5 575 aa13.69□□□□□ -0.22
SEC61A1-201ENST00000243253 SRPRBQ9Y5M8 271 aaKnown RBP13.69□□□□□ -0.22
SEC61A1-201ENST00000243253 WNT7AO00755 349 aa13.69□□□□□ -0.22
SEC61A1-201ENST00000243253 CTDSPL2Q05D32 466 aa13.69□□□□□ -0.22
SEC61A1-201ENST00000243253 MTF1Q14872 753 aa13.69□□□□□ -0.22
SEC61A1-201ENST00000243253 TTF1Q15361 905 aaPredicted RBP13.69□□□□□ -0.22
SEC61A1-201ENST00000243253 JMYQ8N9B5 988 aa13.69□□□□□ -0.22
SEC61A1-201ENST00000243253 STAG1Q8WVM7 1258 aa13.69□□□□□ -0.22
SEC61A1-201ENST00000243253 SAMSN1Q9NSI8 373 aaKnown RBP13.69□□□□□ -0.22
SEC61A1-201ENST00000243253 COBLO75128 1261 aa13.68□□□□□ -0.22
SEC61A1-201ENST00000243253 SERPINC1P01008 464 aa13.68□□□□□ -0.22
SEC61A1-201ENST00000243253 TOP1P11387 765 aaKnown RBP13.68□□□□□ -0.22
SEC61A1-201ENST00000243253 IARSP41252 1262 aaKnown RBP13.68□□□□□ -0.22
SEC61A1-201ENST00000243253 NPY5RQ15761 445 aa13.68□□□□□ -0.22
SEC61A1-201ENST00000243253 EARS2Q5JPH6 523 aaKnown RBP13.68□□□□□ -0.22
SEC61A1-201ENST00000243253 GRAMD1CQ8IYS0 662 aa13.68□□□□□ -0.22
SEC61A1-201ENST00000243253 CNNM3Q8NE01 707 aa13.68□□□□□ -0.22
SEC61A1-201ENST00000243253 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.68□□□□□ -0.228e-7■■□□□ 13.5
SEC61A1-201ENST00000243253 MAP2K7O14733 419 aa13.68□□□□□ -0.22
SEC61A1-201ENST00000243253 ADKP55263 362 aaKnown RBP13.68□□□□□ -0.22
SEC61A1-201ENST00000243253 TRIML1Q8N9V2 468 aa13.68□□□□□ -0.22
SEC61A1-201ENST00000243253 OXER1Q8TDS5 423 aa13.68□□□□□ -0.22
SEC61A1-201ENST00000243253 CARD10Q9BWT7 1032 aa13.68□□□□□ -0.22
SEC61A1-201ENST00000243253 SERTAD1Q9UHV2 236 aa13.68□□□□□ -0.22
SEC61A1-201ENST00000243253 PIP4K2BP78356 416 aa13.68□□□□□ -0.22
SEC61A1-201ENST00000243253 PKN1Q16512 942 aa13.68□□□□□ -0.22
SEC61A1-201ENST00000243253 MLKLQ8NB16 471 aa13.68□□□□□ -0.22
SEC61A1-201ENST00000243253 TNFRSF25Q93038 417 aa13.68□□□□□ -0.22
SEC61A1-201ENST00000243253 NFE2L3Q9Y4A8 694 aa13.68□□□□□ -0.22
SEC61A1-201ENST00000243253 CRACR2BQ8N4Y2 399 aaPredicted RBP13.67□□□□□ -0.22
SEC61A1-201ENST00000243253 WTIPA6NIX2 430 aaPredicted RBP13.67□□□□□ -0.22
SEC61A1-201ENST00000243253 NR5A1Q13285 461 aa13.67□□□□□ -0.22
SEC61A1-201ENST00000243253 MAPK8IP2Q13387 824 aaPredicted RBP13.67□□□□□ -0.22
SEC61A1-201ENST00000243253 SEC23AQ15436 765 aa13.67□□□□□ -0.22
SEC61A1-201ENST00000243253 RAD9BQ6WBX8 426 aa13.67□□□□□ -0.22
SEC61A1-201ENST00000243253 GPR161Q8N6U8 529 aaKnown RBP13.67□□□□□ -0.22
SEC61A1-201ENST00000243253 AIDAQ96BJ3 306 aa13.67□□□□□ -0.22
SEC61A1-201ENST00000243253 MYH1P12882 1939 aa13.67□□□□□ -0.22
SEC61A1-201ENST00000243253 PNPLA7Q6ZV29 1317 aa13.67□□□□□ -0.22
SEC61A1-201ENST00000243253 UTRNP46939 3433 aa13.67□□□□□ -0.22
SEC61A1-201ENST00000243253 POLR2DO15514 142 aaKnown RBP13.66□□□□□ -0.22
SEC61A1-201ENST00000243253 TEX33O43247 280 aa13.66□□□□□ -0.22
SEC61A1-201ENST00000243253 ZSCAN12O43309 604 aa13.66□□□□□ -0.22
SEC61A1-201ENST00000243253 RCAN1P53805 252 aa13.66□□□□□ -0.22
SEC61A1-201ENST00000243253 ZNF827Q17R98 1081 aa13.66□□□□□ -0.22
SEC61A1-201ENST00000243253 PIGBQ92521 554 aa13.66□□□□□ -0.22
SEC61A1-201ENST00000243253 PANX2Q96RD6 677 aa13.66□□□□□ -0.22
SEC61A1-201ENST00000243253 NOL10Q9BSC4 688 aaKnown RBP13.66□□□□□ -0.22
SEC61A1-201ENST00000243253 MTA3Q9BTC8 594 aa13.66□□□□□ -0.22
SEC61A1-201ENST00000243253 IRX2Q9BZI1 471 aaPredicted RBP13.66□□□□□ -0.22
SEC61A1-201ENST00000243253 ANKZF1Q9H8Y5 726 aa13.66□□□□□ -0.22
SEC61A1-201ENST00000243253 KCNJ14Q9UNX9 436 aa13.66□□□□□ -0.22
SEC61A1-201ENST00000243253 BAZ2BQ9UIF8 2168 aaKnown RBP13.66□□□□□ -0.22
SEC61A1-201ENST00000243253 A0A0U1RQG5 324 aaPredicted RBP13.66□□□□□ -0.22
SEC61A1-201ENST00000243253 KLHL10Q6JEL2 608 aa13.66□□□□□ -0.22
SEC61A1-201ENST00000243253 ADD3Q9UEY8 706 aaKnown RBP13.66□□□□□ -0.22
SEC61A1-201ENST00000243253 TAF1P21675 1872 aa13.66□□□□□ -0.22
SEC61A1-201ENST00000243253 BCL9O00512 1426 aa13.66□□□□□ -0.22
SEC61A1-201ENST00000243253 GOLGA8AA7E2F4 631 aa13.66□□□□□ -0.22
SEC61A1-201ENST00000243253 PES1O00541 588 aaKnown RBP13.66□□□□□ -0.22
SEC61A1-201ENST00000243253 IL2RBP14784 551 aa13.66□□□□□ -0.22
SEC61A1-201ENST00000243253 ERCC5P28715 1186 aaPredicted RBP13.66□□□□□ -0.22
SEC61A1-201ENST00000243253 TDO2P48775 406 aa13.66□□□□□ -0.22
SEC61A1-201ENST00000243253 PLCD1P51178 756 aa13.66□□□□□ -0.22
SEC61A1-201ENST00000243253 DPYDQ12882 1025 aa13.66□□□□□ -0.22
SEC61A1-201ENST00000243253 RASGRF1Q13972 1273 aa13.66□□□□□ -0.22
SEC61A1-201ENST00000243253 DIS3L2Q8IYB7 885 aaKnown RBP13.66□□□□□ -0.22
SEC61A1-201ENST00000243253 TRMT44Q8IYL2 757 aaKnown RBP13.66□□□□□ -0.22
SEC61A1-201ENST00000243253 DHX58Q96C10 678 aa13.66□□□□□ -0.22
SEC61A1-201ENST00000243253 COL1A1P02452 1464 aaPredicted RBP13.66□□□□□ -0.22
SEC61A1-201ENST00000243253 TMEM67Q5HYA8 995 aa13.65□□□□□ -0.22
SEC61A1-201ENST00000243253 AKNAD1Q5T1N1 836 aa13.65□□□□□ -0.22
SEC61A1-201ENST00000243253 HOMER1Q86YM7 354 aa13.65□□□□□ -0.22
SEC61A1-201ENST00000243253 GPIHBP1Q8IV16 184 aa13.65□□□□□ -0.22
SEC61A1-201ENST00000243253 SLC26A6Q9BXS9 759 aa13.65□□□□□ -0.22
SEC61A1-201ENST00000243253 PARD6BQ9BYG5 372 aa13.65□□□□□ -0.22
SEC61A1-201ENST00000243253 TMEM51Q9NW97 253 aa13.65□□□□□ -0.22
SEC61A1-201ENST00000243253 ZBTB1Q9Y2K1 713 aa13.65□□□□□ -0.22
SEC61A1-201ENST00000243253 DOT1LQ8TEK3 1739 aa13.65□□□□□ -0.22
SEC61A1-201ENST00000243253 SOS2Q07890 1332 aaPredicted RBP13.65□□□□□ -0.22
SEC61A1-201ENST00000243253 PPP1R3GB7ZBB8 358 aa13.65□□□□□ -0.22
SEC61A1-201ENST00000243253 SMIM22K7EJ46 135 aa13.65□□□□□ -0.22
SEC61A1-201ENST00000243253 ABL1P00519 1130 aa13.65□□□□□ -0.22
SEC61A1-201ENST00000243253 ST5P78524 1137 aa13.65□□□□□ -0.22
SEC61A1-201ENST00000243253 CT47A1Q5JQC4 288 aaPredicted RBP13.65□□□□□ -0.22
SEC61A1-201ENST00000243253 CADPS2Q86UW7 1296 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms