RNA–Protein interactions for RNA: ENST00000231526.8

TRAPPC13-201, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRAPPC13, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-201ENST00000231526 SPOCK3Q9BQ16 436 aa6.31□□□□□ -1.4
TRAPPC13-201ENST00000231526 TOMM22Q9NS69 142 aa6.31□□□□□ -1.4
TRAPPC13-201ENST00000231526 PARP3Q9Y6F1 533 aa6.31□□□□□ -1.4
TRAPPC13-201ENST00000231526 C6orf229H3BNL8 230 aa6.31□□□□□ -1.4
TRAPPC13-201ENST00000231526 BBOX1O75936 387 aa6.31□□□□□ -1.4
TRAPPC13-201ENST00000231526 GNAT2P19087 354 aa6.31□□□□□ -1.4
TRAPPC13-201ENST00000231526 CCT2P78371 535 aaKnown RBP6.31□□□□□ -1.4
TRAPPC13-201ENST00000231526 EXOSC10Q01780 885 aaKnown RBP6.31□□□□□ -1.4
TRAPPC13-201ENST00000231526 CTDSPL2Q05D32 466 aa6.31□□□□□ -1.4
TRAPPC13-201ENST00000231526 ST3GAL1Q11201 340 aa6.31□□□□□ -1.4
TRAPPC13-201ENST00000231526 EZH2Q15910 746 aaKnown RBP6.31□□□□□ -1.4
TRAPPC13-201ENST00000231526 CCDC96Q2M329 555 aa6.31□□□□□ -1.4
TRAPPC13-201ENST00000231526 LARP1BQ659C4 914 aaKnown RBP6.31□□□□□ -1.4
TRAPPC13-201ENST00000231526 CLEC17AQ6ZS10 378 aa6.31□□□□□ -1.4
TRAPPC13-201ENST00000231526 ADGRA1Q86SQ6 560 aa6.31□□□□□ -1.4
TRAPPC13-201ENST00000231526 MAF1Q9H063 256 aa6.31□□□□□ -1.4
TRAPPC13-201ENST00000231526 GABBR1Q9UBS5 961 aa6.31□□□□□ -1.4
TRAPPC13-201ENST00000231526 GGA1Q9UJY5 639 aa6.31□□□□□ -1.4
TRAPPC13-201ENST00000231526 DDX49Q9Y6V7 483 aaKnown RBP6.31□□□□□ -1.4
TRAPPC13-201ENST00000231526 PNPLA7Q6ZV29 1317 aa6.3□□□□□ -1.4
TRAPPC13-201ENST00000231526 MAGEB6P1A0A0J9YX57 407 aa6.3□□□□□ -1.4
TRAPPC13-201ENST00000231526 GSG1L2A8MUP6 293 aa6.3□□□□□ -1.4
TRAPPC13-201ENST00000231526 PRC1O43663 620 aa6.3□□□□□ -1.4
TRAPPC13-201ENST00000231526 PRPF40AO75400 957 aaKnown RBP6.3□□□□□ -1.4
TRAPPC13-201ENST00000231526 SF3B2Q13435 895 aaKnown RBP6.3□□□□□ -1.4
TRAPPC13-201ENST00000231526 ZNF804AQ7Z570 1209 aa6.3□□□□□ -1.4
TRAPPC13-201ENST00000231526 DZIP1Q86YF9 867 aaKnown RBP6.3□□□□□ -1.4
TRAPPC13-201ENST00000231526 SPIRE2Q8WWL2 714 aa6.3□□□□□ -1.4
TRAPPC13-201ENST00000231526 GTF3C6Q969F1 213 aa6.3□□□□□ -1.4
TRAPPC13-201ENST00000231526 BRIP1Q9BX63 1249 aa6.3□□□□□ -1.4
TRAPPC13-201ENST00000231526 EPB41L4AQ9HCS5 686 aaPredicted RBP6.3□□□□□ -1.4
TRAPPC13-201ENST00000231526 SH3BP1Q9Y3L3 701 aa6.3□□□□□ -1.4
TRAPPC13-201ENST00000231526 LAMA4Q16363 1823 aa6.3□□□□□ -1.4
TRAPPC13-201ENST00000231526 COL1A1P02452 1464 aaPredicted RBP6.3□□□□□ -1.4
TRAPPC13-201ENST00000231526 MYH13Q9UKX3 1938 aa6.3□□□□□ -1.4
TRAPPC13-201ENST00000231526 DOCK2Q92608 1830 aa6.3□□□□□ -1.4
TRAPPC13-201ENST00000231526 A0A1B0GUL6 1792 aa6.3□□□□□ -1.4
TRAPPC13-201ENST00000231526 MINDY4BA8MYZ0 360 aa6.3□□□□□ -1.4
TRAPPC13-201ENST00000231526 B4E1Z4 1266 aa6.3□□□□□ -1.4
TRAPPC13-201ENST00000231526 PPFIA3O75145 1194 aa6.3□□□□□ -1.4
TRAPPC13-201ENST00000231526 PDCP20941 246 aa6.3□□□□□ -1.4
TRAPPC13-201ENST00000231526 GPSM2P81274 684 aa6.3□□□□□ -1.4
TRAPPC13-201ENST00000231526 TAGLNQ01995 201 aaKnown RBP6.3□□□□□ -1.4
TRAPPC13-201ENST00000231526 MECOMQ03112 1051 aa6.3□□□□□ -1.4
TRAPPC13-201ENST00000231526 SCRN1Q12765 414 aa6.3□□□□□ -1.4
TRAPPC13-201ENST00000231526 RRP12Q5JTH9 1297 aaKnown RBP6.3□□□□□ -1.4
TRAPPC13-201ENST00000231526 TBC1D10CQ8IV04 446 aa6.3□□□□□ -1.4
TRAPPC13-201ENST00000231526 FAM184AQ8NB25 1140 aa6.3□□□□□ -1.4
TRAPPC13-201ENST00000231526 NSUN4Q96CB9 384 aaKnown RBP6.3□□□□□ -1.4
TRAPPC13-201ENST00000231526 DDX11Q96FC9 970 aa6.3□□□□□ -1.4
TRAPPC13-201ENST00000231526 TMX4Q9H1E5 349 aaPredicted RBP6.3□□□□□ -1.4
TRAPPC13-201ENST00000231526 AATFQ9NY61 560 aaKnown RBP eCLIP6.3□□□□□ -1.4
TRAPPC13-201ENST00000231526 JAK2O60674 1132 aa6.29□□□□□ -1.4
TRAPPC13-201ENST00000231526 ZSCAN22P10073 491 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC13-201ENST00000231526 SRGNP10124 158 aa6.29□□□□□ -1.4
TRAPPC13-201ENST00000231526 ZNF16P17020 682 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC13-201ENST00000231526 ATP2B4P23634 1241 aa6.29□□□□□ -1.4
TRAPPC13-201ENST00000231526 HOXA10P31260 410 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC13-201ENST00000231526 DYNLL1P63167 89 aaKnown RBP6.29□□□□□ -1.4
TRAPPC13-201ENST00000231526 SLC15A2Q16348 729 aa6.29□□□□□ -1.4
TRAPPC13-201ENST00000231526 SKOR2Q2VWA4 1001 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC13-201ENST00000231526 MFSD6Q6ZSS7 791 aa6.29□□□□□ -1.4
TRAPPC13-201ENST00000231526 MB21D2Q8IYB1 491 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC13-201ENST00000231526 WDR66Q8TBY9 1149 aa6.29□□□□□ -1.4
TRAPPC13-201ENST00000231526 CRAMP1Q96RY5 1269 aa6.29□□□□□ -1.4
TRAPPC13-201ENST00000231526 AGXT2Q9BYV1 514 aa6.29□□□□□ -1.4
TRAPPC13-201ENST00000231526 NCOA5Q9HCD5 579 aaKnown RBP6.29□□□□□ -1.4
TRAPPC13-201ENST00000231526 INCENPQ9NQS7 918 aa6.29□□□□□ -1.4
TRAPPC13-201ENST00000231526 ATP6V1DQ9Y5K8 247 aa6.29□□□□□ -1.4
TRAPPC13-201ENST00000231526 ADGRG1Q9Y653 693 aa6.29□□□□□ -1.4
TRAPPC13-201ENST00000231526 LDHBP07195 334 aaKnown RBP6.29□□□□□ -1.4
TRAPPC13-201ENST00000231526 ALDH1B1P30837 517 aa6.29□□□□□ -1.4
TRAPPC13-201ENST00000231526 PDE6BP35913 854 aa6.29□□□□□ -1.4
TRAPPC13-201ENST00000231526 MMP14P50281 582 aa6.29□□□□□ -1.4
TRAPPC13-201ENST00000231526 RHBDL3P58872 404 aa6.29□□□□□ -1.4
TRAPPC13-201ENST00000231526 ALX1Q15699 326 aa6.29□□□□□ -1.4
TRAPPC13-201ENST00000231526 NAALADL2Q58DX5 795 aa6.29□□□□□ -1.4
TRAPPC13-201ENST00000231526 RAB11FIP4Q86YS3 637 aa6.29□□□□□ -1.4
TRAPPC13-201ENST00000231526 LARGE2Q8N3Y3 721 aa6.29□□□□□ -1.4
TRAPPC13-201ENST00000231526 FBXO41Q8TF61 875 aa6.29□□□□□ -1.4
TRAPPC13-201ENST00000231526 RIOK1Q9BRS2 568 aaKnown RBP6.29□□□□□ -1.4
TRAPPC13-201ENST00000231526 NBPF3Q9H094 633 aa6.29□□□□□ -1.4
TRAPPC13-201ENST00000231526 METTL14Q9HCE5 456 aaKnown RBP6.29□□□□□ -1.4
TRAPPC13-201ENST00000231526 CD209Q9NNX6 404 aa6.29□□□□□ -1.4
TRAPPC13-201ENST00000231526 POLLQ9UGP5 575 aa6.29□□□□□ -1.4
TRAPPC13-201ENST00000231526 KLF18A0A0U1RQI7 1052 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 KLRG2A4D1S0 409 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 TTC36A6NLP5 189 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 PIK3CDO00329 1044 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 CPLX1O14810 134 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 PPEF1O14829 653 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 PFKFB2O60825 505 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 F13A1P00488 732 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 NPR1P16066 1061 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 POLD1P28340 1107 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 PDIA3P30101 505 aaKnown RBP6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 PTGER2P43116 358 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 AKNAD1Q5T1N1 836 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 FERMT3Q86UX7 667 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 TDRD7Q8NHU6 1098 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms