RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 SLC10A4Q96EP9 437 aa17.81■□□□□ 0.44
RPA3-201ENST00000223129 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.81■□□□□ 0.44
RPA3-201ENST00000223129 LAMA4Q16363 1823 aa17.8■□□□□ 0.44
RPA3-201ENST00000223129 MPHOSPH10O00566 681 aaKnown RBP17.8■□□□□ 0.44
RPA3-201ENST00000223129 GH2P01242 217 aa17.8■□□□□ 0.44
RPA3-201ENST00000223129 AKR1B1P15121 316 aa17.8■□□□□ 0.44
RPA3-201ENST00000223129 ZNF157P51786 506 aaPredicted RBP17.8■□□□□ 0.44
RPA3-201ENST00000223129 AKNAD1Q5T1N1 836 aa17.8■□□□□ 0.44
RPA3-201ENST00000223129 NKX2-3Q8TAU0 364 aa17.8■□□□□ 0.44
RPA3-201ENST00000223129 TOMM22Q9NS69 142 aa17.8■□□□□ 0.44
RPA3-201ENST00000223129 SLC27A2O14975 620 aa17.79■□□□□ 0.44
RPA3-201ENST00000223129 ABCB5Q2M3G0 1257 aa17.79■□□□□ 0.44
RPA3-201ENST00000223129 RRP12Q5JTH9 1297 aaKnown RBP17.79■□□□□ 0.44
RPA3-201ENST00000223129 NOL9Q5SY16 702 aaKnown RBP17.79■□□□□ 0.44
RPA3-201ENST00000223129 CREB3L3Q68CJ9 461 aa17.79■□□□□ 0.44
RPA3-201ENST00000223129 RGMBQ6NW40 437 aa17.79■□□□□ 0.44
RPA3-201ENST00000223129 MFSD6Q6ZSS7 791 aa17.79■□□□□ 0.44
RPA3-201ENST00000223129 PAXIP1Q6ZW49 1069 aaPredicted RBP17.79■□□□□ 0.44
RPA3-201ENST00000223129 ZNF444Q8N0Y2 327 aaPredicted RBP17.79■□□□□ 0.44
RPA3-201ENST00000223129 STAG1Q8WVM7 1258 aa17.79■□□□□ 0.44
RPA3-201ENST00000223129 USP26Q9BXU7 913 aa17.79■□□□□ 0.44
RPA3-201ENST00000223129 ATAD5Q96QE3 1844 aa17.79■□□□□ 0.44
RPA3-201ENST00000223129 FGRP09769 529 aa17.79■□□□□ 0.44
RPA3-201ENST00000223129 GRM1Q13255 1194 aa17.79■□□□□ 0.44
RPA3-201ENST00000223129 DEFB115Q30KQ5 88 aa17.79■□□□□ 0.44
RPA3-201ENST00000223129 FAM47AQ5JRC9 791 aa17.79■□□□□ 0.44
RPA3-201ENST00000223129 ZNF287Q9HBT7 754 aa17.79■□□□□ 0.44
RPA3-201ENST00000223129 PICK1Q9NRD5 415 aa17.79■□□□□ 0.44
RPA3-201ENST00000223129 TAOK2Q9UL54 1235 aa17.79■□□□□ 0.44
RPA3-201ENST00000223129 ZBTB21Q9ULJ3 1066 aa17.79■□□□□ 0.44
RPA3-201ENST00000223129 NEDD4P46934 1319 aa17.78■□□□□ 0.44
RPA3-201ENST00000223129 DOCK1Q14185 1865 aa17.78■□□□□ 0.44
RPA3-201ENST00000223129 MKRN3Q13064 507 aaKnown RBP17.78■□□□□ 0.44
RPA3-201ENST00000223129 CYP4F22Q6NT55 531 aa17.78■□□□□ 0.44
RPA3-201ENST00000223129 UNCXA6NJT0 531 aa17.77■□□□□ 0.44
RPA3-201ENST00000223129 RASSF10A6NK89 507 aa17.77■□□□□ 0.44
RPA3-201ENST00000223129 RANBP6O60518 1105 aaKnown RBP17.77■□□□□ 0.44
RPA3-201ENST00000223129 PTPRAP18433 802 aa17.77■□□□□ 0.44
RPA3-201ENST00000223129 GUCY1A2P33402 732 aa17.77■□□□□ 0.44
RPA3-201ENST00000223129 RAB3GAP1Q15042 981 aa17.77■□□□□ 0.44
RPA3-201ENST00000223129 STOX1Q6ZVD7 989 aa17.77■□□□□ 0.44
RPA3-201ENST00000223129 OPTNQ96CV9 577 aa17.77■□□□□ 0.44
RPA3-201ENST00000223129 CCDC17Q96LX7 622 aa17.77■□□□□ 0.44
RPA3-201ENST00000223129 CABP5Q9NP86 173 aa17.77■□□□□ 0.44
RPA3-201ENST00000223129 E7EWF7 191 aa17.77■□□□□ 0.43
RPA3-201ENST00000223129 ORC4O43929 436 aa17.77■□□□□ 0.43
RPA3-201ENST00000223129 ASNSP08243 561 aa17.77■□□□□ 0.43
RPA3-201ENST00000223129 GJA5P36382 358 aa17.77■□□□□ 0.43
RPA3-201ENST00000223129 TFAP4Q01664 338 aa17.77■□□□□ 0.43
RPA3-201ENST00000223129 SEPT2Q15019 361 aa17.77■□□□□ 0.43
RPA3-201ENST00000223129 RASEFQ8IZ41 740 aa17.77■□□□□ 0.43
RPA3-201ENST00000223129 OTUD5Q96G74 571 aa17.77■□□□□ 0.43
RPA3-201ENST00000223129 HHIPL1Q96JK4 782 aa17.77■□□□□ 0.43
RPA3-201ENST00000223129 RNF41Q9H4P4 317 aaPredicted RBP17.77■□□□□ 0.43
RPA3-201ENST00000223129 ZHX2Q9Y6X8 837 aa17.77■□□□□ 0.43
RPA3-201ENST00000223129 ERO1BQ86YB8 467 aa17.76■□□□□ 0.43
RPA3-201ENST00000223129 RASAL3Q86YV0 1011 aa17.76■□□□□ 0.43
RPA3-201ENST00000223129 CLEC10AQ8IUN9 316 aa17.76■□□□□ 0.43
RPA3-201ENST00000223129 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.76■□□□□ 0.43
RPA3-201ENST00000223129 SPDYE5A6NIY4 337 aa17.76■□□□□ 0.43
RPA3-201ENST00000223129 B4E1Z4 1266 aa17.76■□□□□ 0.43
RPA3-201ENST00000223129 TSPY3P0CV98 308 aa17.76■□□□□ 0.43
RPA3-201ENST00000223129 TSPY8P0CW00 308 aa17.76■□□□□ 0.43
RPA3-201ENST00000223129 HSPA4P34932 840 aa17.76■□□□□ 0.43
RPA3-201ENST00000223129 WNK4Q96J92 1243 aa17.76■□□□□ 0.43
RPA3-201ENST00000223129 TSPY2A6NKD2 308 aa17.75■□□□□ 0.43
RPA3-201ENST00000223129 FAM155AB1AL88 458 aaPredicted RBP17.75■□□□□ 0.43
RPA3-201ENST00000223129 RNF20Q5VTR2 975 aa17.75■□□□□ 0.43
RPA3-201ENST00000223129 TMEM179Q6ZVK1 233 aa17.75■□□□□ 0.43
RPA3-201ENST00000223129 USP17L5A8MUK1 530 aa17.74■□□□□ 0.43
RPA3-201ENST00000223129 IRF6O14896 467 aa17.74■□□□□ 0.43
RPA3-201ENST00000223129 KDM4AO75164 1064 aa17.74■□□□□ 0.43
RPA3-201ENST00000223129 SLC10A3P09131 477 aa17.74■□□□□ 0.43
RPA3-201ENST00000223129 PCP11498 1178 aaKnown RBP17.74■□□□□ 0.43
RPA3-201ENST00000223129 PPATQ06203 517 aa17.74■□□□□ 0.43
RPA3-201ENST00000223129 SPRYD7Q5W111 196 aa17.74■□□□□ 0.43
RPA3-201ENST00000223129 CAPNS2Q96L46 248 aa17.74■□□□□ 0.43
RPA3-201ENST00000223129 TSHZ2Q9NRE2 1034 aa17.74■□□□□ 0.43
RPA3-201ENST00000223129 EPB41L2O43491 1005 aaKnown RBP17.74■□□□□ 0.43
RPA3-201ENST00000223129 NMT2O60551 498 aa17.74■□□□□ 0.43
RPA3-201ENST00000223129 COL9A3Q14050 684 aaPredicted RBP17.74■□□□□ 0.43
RPA3-201ENST00000223129 NEDD1Q8NHV4 660 aa17.74■□□□□ 0.43
RPA3-201ENST00000223129 CCDC102AQ96A19 550 aa17.74■□□□□ 0.43
RPA3-201ENST00000223129 GINM1Q9NU53 330 aa17.74■□□□□ 0.43
RPA3-201ENST00000223129 ZSWIM5Q9P217 1185 aa17.74■□□□□ 0.43
RPA3-201ENST00000223129 PHIPQ8WWQ0 1821 aa17.74■□□□□ 0.43
RPA3-201ENST00000223129 SPP2Q13103 211 aa17.73■□□□□ 0.43
RPA3-201ENST00000223129 SIAH1Q8IUQ4 282 aa17.73■□□□□ 0.43
RPA3-201ENST00000223129 ESR2Q92731 530 aa17.73■□□□□ 0.43
RPA3-201ENST00000223129 ZIC5Q96T25 663 aa17.73■□□□□ 0.43
RPA3-201ENST00000223129 ZKSCAN3Q9BRR0 538 aa17.73■□□□□ 0.43
RPA3-201ENST00000223129 KRT23Q9C075 422 aa17.73■□□□□ 0.43
RPA3-201ENST00000223129 IL17RBQ9NRM6 502 aa17.73■□□□□ 0.43
RPA3-201ENST00000223129 AFG3L2Q9Y4W6 797 aa17.73■□□□□ 0.43
RPA3-201ENST00000223129 SNX14Q9Y5W7 946 aa17.73■□□□□ 0.43
RPA3-201ENST00000223129 TRIM75PA6NK02 468 aa17.72■□□□□ 0.43
RPA3-201ENST00000223129 ZKSCAN1P17029 563 aaPredicted RBP17.72■□□□□ 0.43
RPA3-201ENST00000223129 VEGFBP49765 207 aa17.72■□□□□ 0.43
RPA3-201ENST00000223129 TRDNQ13061 729 aa17.72■□□□□ 0.43
RPA3-201ENST00000223129 ADCK5Q3MIX3 580 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms