RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 ZBTB21Q9ULJ3 1066 aa20.9■□□□□ 0.94
MRPL28-201ENST00000199706 ROBO3Q96MS0 1386 aa20.89■□□□□ 0.93
MRPL28-201ENST00000199706 BTBD19C9JJ37 291 aa20.89■□□□□ 0.93
MRPL28-201ENST00000199706 GPR25O00155 361 aa20.89■□□□□ 0.93
MRPL28-201ENST00000199706 SHMT1P34896 483 aa20.89■□□□□ 0.93
MRPL28-201ENST00000199706 C12orf60Q5U649 245 aa20.89■□□□□ 0.93
MRPL28-201ENST00000199706 FAM43AQ8N2R8 423 aa20.89■□□□□ 0.93
MRPL28-201ENST00000199706 GSG1L2A8MUP6 293 aa20.88■□□□□ 0.93
MRPL28-201ENST00000199706 CRHR2Q13324 411 aa20.88■□□□□ 0.93
MRPL28-201ENST00000199706 PROCA1Q8NCQ7 364 aaPredicted RBP20.88■□□□□ 0.93
MRPL28-201ENST00000199706 HELLSQ9NRZ9 838 aa20.88■□□□□ 0.93
MRPL28-201ENST00000199706 M0R2C6 588 aa20.87■□□□□ 0.93
MRPL28-201ENST00000199706 TBC1D8O95759 1140 aa20.87■□□□□ 0.93
MRPL28-201ENST00000199706 SH3D19Q5HYK7 790 aa20.87■□□□□ 0.93
MRPL28-201ENST00000199706 ZFYVE28Q9HCC9 887 aa20.87■□□□□ 0.93
MRPL28-201ENST00000199706 USP17L12C9JPN9 530 aa20.86■□□□□ 0.93
MRPL28-201ENST00000199706 USP17L21D6R901 530 aa20.86■□□□□ 0.93
MRPL28-201ENST00000199706 TAF1CQ15572 869 aaPredicted RBP20.86■□□□□ 0.93
MRPL28-201ENST00000199706 CERKLQ49MI3 558 aaPredicted RBP20.86■□□□□ 0.93
MRPL28-201ENST00000199706 CTR9Q6PD62 1173 aa20.86■□□□□ 0.93
MRPL28-201ENST00000199706 C16orf86Q6ZW13 317 aa20.86■□□□□ 0.93
MRPL28-201ENST00000199706 ZNF296Q8WUU4 475 aaPredicted RBP20.86■□□□□ 0.93
MRPL28-201ENST00000199706 NACAP1Q9BZK3 213 aa20.86■□□□□ 0.93
MRPL28-201ENST00000199706 TRIM75PA6NK02 468 aa20.85■□□□□ 0.93
MRPL28-201ENST00000199706 C19orf81C9J6K1 198 aa20.85■□□□□ 0.93
MRPL28-201ENST00000199706 PATL2C9JE40 543 aaKnown RBP20.85■□□□□ 0.93
MRPL28-201ENST00000199706 TLR2O60603 784 aa20.85■□□□□ 0.93
MRPL28-201ENST00000199706 FKTNO75072 461 aa20.85■□□□□ 0.93
MRPL28-201ENST00000199706 ABCB5Q2M3G0 1257 aa20.85■□□□□ 0.93
MRPL28-201ENST00000199706 SLC4A8Q2Y0W8 1093 aa20.85■□□□□ 0.93
MRPL28-201ENST00000199706 GPAT2Q6NUI2 795 aa20.85■□□□□ 0.93
MRPL28-201ENST00000199706 CCDC17Q96LX7 622 aa20.85■□□□□ 0.93
MRPL28-201ENST00000199706 PARK7Q99497 189 aaKnown RBP20.85■□□□□ 0.93
MRPL28-201ENST00000199706 AGTPBP1Q9UPW5 1226 aa20.85■□□□□ 0.93
MRPL28-201ENST00000199706 GREB1LQ9C091 1923 aaPredicted RBP20.84■□□□□ 0.93
MRPL28-201ENST00000199706 ADGRA2Q96PE1 1338 aa20.84■□□□□ 0.93
MRPL28-201ENST00000199706 HIP1O00291 1037 aa20.84■□□□□ 0.93
MRPL28-201ENST00000199706 GDF11O95390 407 aa20.84■□□□□ 0.93
MRPL28-201ENST00000199706 GH2P01242 217 aa20.84■□□□□ 0.93
MRPL28-201ENST00000199706 PDE4AP27815 886 aa20.84■□□□□ 0.93
MRPL28-201ENST00000199706 BACE1P56817 501 aa20.84■□□□□ 0.93
MRPL28-201ENST00000199706 JAG1P78504 1218 aa20.84■□□□□ 0.93
MRPL28-201ENST00000199706 SPP2Q13103 211 aa20.84■□□□□ 0.93
MRPL28-201ENST00000199706 TNS4Q8IZW8 715 aa20.84■□□□□ 0.93
MRPL28-201ENST00000199706 R3HDMLQ9H3Y0 253 aa20.84■□□□□ 0.93
MRPL28-201ENST00000199706 EPB41L4AQ9HCS5 686 aaPredicted RBP20.84■□□□□ 0.93
MRPL28-201ENST00000199706 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.84■□□□□ 0.93
MRPL28-201ENST00000199706 ZMYM6O95789 1325 aa20.83■□□□□ 0.93
MRPL28-201ENST00000199706 TRIM6-TRIM34B2RNG4 842 aa20.83■□□□□ 0.93
MRPL28-201ENST00000199706 PDHXO00330 501 aa20.83■□□□□ 0.93
MRPL28-201ENST00000199706 CYP2D6P10635 497 aa20.83■□□□□ 0.93
MRPL28-201ENST00000199706 CENPQQ7L2Z9 268 aaPredicted RBP20.83■□□□□ 0.93
MRPL28-201ENST00000199706 SEC62Q99442 399 aaKnown RBP20.83■□□□□ 0.93
MRPL28-201ENST00000199706 CABP5Q9NP86 173 aa20.83■□□□□ 0.93
MRPL28-201ENST00000199706 PABPC4Q13310 644 aaKnown RBP eCLIP20.82■□□□□ 0.921e-8■■■■■ 39.2
MRPL28-201ENST00000199706 PKN2Q16513 984 aaKnown RBP20.82■□□□□ 0.92
MRPL28-201ENST00000199706 MCMDC2Q4G0Z9 681 aa20.82■□□□□ 0.92
MRPL28-201ENST00000199706 TMEM179Q6ZVK1 233 aa20.82■□□□□ 0.92
MRPL28-201ENST00000199706 CTU1Q7Z7A3 348 aaKnown RBP20.82■□□□□ 0.92
MRPL28-201ENST00000199706 C12orf42Q96LP6 360 aa20.82■□□□□ 0.92
MRPL28-201ENST00000199706 PNMA3Q9UL41 463 aa20.82■□□□□ 0.92
MRPL28-201ENST00000199706 USP17L10C9JJH3 530 aa20.81■□□□□ 0.92
MRPL28-201ENST00000199706 TDO2P48775 406 aa20.81■□□□□ 0.92
MRPL28-201ENST00000199706 CDK8P49336 464 aa20.81■□□□□ 0.92
MRPL28-201ENST00000199706 MFAP1P55081 439 aaKnown RBP20.81■□□□□ 0.92
MRPL28-201ENST00000199706 ALX1Q15699 326 aa20.81■□□□□ 0.92
MRPL28-201ENST00000199706 TTC22Q5TAA0 569 aa20.81■□□□□ 0.92
MRPL28-201ENST00000199706 CCDC84Q86UT8 332 aaPredicted RBP20.81■□□□□ 0.92
MRPL28-201ENST00000199706 IFNL3Q8IZI9 196 aa20.81■□□□□ 0.92
MRPL28-201ENST00000199706 ERO1AQ96HE7 468 aa20.81■□□□□ 0.92
MRPL28-201ENST00000199706 KIAA1683Q9H0B3 1180 aa20.81■□□□□ 0.92
MRPL28-201ENST00000199706 ZNF287Q9HBT7 754 aa20.81■□□□□ 0.92
MRPL28-201ENST00000199706 A0A0D9SFI3 127 aa20.8■□□□□ 0.92
MRPL28-201ENST00000199706 FOXP2O15409 715 aa20.8■□□□□ 0.92
MRPL28-201ENST00000199706 SDSP20132 328 aa20.8■□□□□ 0.92
MRPL28-201ENST00000199706 USP14P54578 494 aa20.8■□□□□ 0.92
MRPL28-201ENST00000199706 HMGCS2P54868 508 aa20.8■□□□□ 0.92
MRPL28-201ENST00000199706 SP3Q02447 781 aa20.8■□□□□ 0.92
MRPL28-201ENST00000199706 EVX2Q03828 476 aa20.8■□□□□ 0.92
MRPL28-201ENST00000199706 MTMR2Q13614 643 aa20.8■□□□□ 0.92
MRPL28-201ENST00000199706 SHROOM1Q2M3G4 852 aaPredicted RBP20.8■□□□□ 0.92
MRPL28-201ENST00000199706 SLC44A5Q8NCS7 719 aa20.8■□□□□ 0.92
MRPL28-201ENST00000199706 RILPL2Q969X0 211 aa20.8■□□□□ 0.92
MRPL28-201ENST00000199706 DYNLL2Q96FJ2 89 aa20.8■□□□□ 0.92
MRPL28-201ENST00000199706 CYP2D7A0A087X1C5 515 aa20.79■□□□□ 0.92
MRPL28-201ENST00000199706 APPP05067 770 aa20.79■□□□□ 0.92
MRPL28-201ENST00000199706 HOXA7P31268 230 aaPredicted RBP20.79■□□□□ 0.92
MRPL28-201ENST00000199706 GUCY1A2P33402 732 aa20.79■□□□□ 0.92
MRPL28-201ENST00000199706 C17orf99Q6UX52 265 aa20.79■□□□□ 0.92
MRPL28-201ENST00000199706 GADL1Q6ZQY3 521 aa20.79■□□□□ 0.92
MRPL28-201ENST00000199706 FAM227BQ96M60 508 aa20.79■□□□□ 0.92
MRPL28-201ENST00000199706 NAPBQ9H115 298 aa20.79■□□□□ 0.92
MRPL28-201ENST00000199706 TMOD4Q9NZQ9 345 aa20.79■□□□□ 0.92
MRPL28-201ENST00000199706 CCDC171Q6TFL3 1326 aa20.78■□□□□ 0.92
MRPL28-201ENST00000199706 CENPBP07199 599 aaPredicted RBP20.78■□□□□ 0.92
MRPL28-201ENST00000199706 NMIQ13287 307 aaPredicted RBP20.78■□□□□ 0.92
MRPL28-201ENST00000199706 ARHGEF6Q15052 776 aa20.78■□□□□ 0.92
MRPL28-201ENST00000199706 USP17L2Q6R6M4 530 aa20.78■□□□□ 0.92
MRPL28-201ENST00000199706 HTTP42858 3142 aa20.78■□□□□ 0.92
MRPL28-201ENST00000199706 PLIN4Q96Q06 1357 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms