RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 UBN2Q6ZU65 1347 aa19.02■□□□□ 0.63
CTDP1-201ENST00000075430 FER1L4A9Z1Z3 1794 aa19.02■□□□□ 0.63
CTDP1-201ENST00000075430 MBD4O95243 580 aa19.01■□□□□ 0.63
CTDP1-201ENST00000075430 IL2RBP14784 551 aa19.01■□□□□ 0.63
CTDP1-201ENST00000075430 PHKA1P46020 1223 aa19.01■□□□□ 0.63
CTDP1-201ENST00000075430 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.01■□□□□ 0.63
CTDP1-201ENST00000075430 FAM204AQ9H8W3 233 aa19.01■□□□□ 0.63
CTDP1-201ENST00000075430 KDM6AO15550 1401 aaPredicted RBP19.01■□□□□ 0.63
CTDP1-201ENST00000075430 HDXQ7Z353 690 aa19.01■□□□□ 0.63
CTDP1-201ENST00000075430 PIH1D3Q9NQM4 214 aaKnown RBP19.01■□□□□ 0.63
CTDP1-201ENST00000075430 ADGRG1Q9Y653 693 aa19.01■□□□□ 0.63
CTDP1-201ENST00000075430 C1orf167Q5SNV9 1468 aa19.01■□□□□ 0.63
CTDP1-201ENST00000075430 ACTN2P35609 894 aa19.01■□□□□ 0.63
CTDP1-201ENST00000075430 RABL6Q3YEC7 729 aaPredicted RBP19.01■□□□□ 0.63
CTDP1-201ENST00000075430 MED15Q96RN5 788 aa19.01■□□□□ 0.63
CTDP1-201ENST00000075430 MEGF6O75095 1541 aa19.01■□□□□ 0.63
CTDP1-201ENST00000075430 CD44P16070 742 aaKnown RBP19■□□□□ 0.63
CTDP1-201ENST00000075430 SART3Q15020 963 aaKnown RBP19■□□□□ 0.63
CTDP1-201ENST00000075430 KIFC2Q96AC6 838 aa19■□□□□ 0.63
CTDP1-201ENST00000075430 ERICH2A1L162 156 aa19■□□□□ 0.63
CTDP1-201ENST00000075430 TULP1O00294 542 aaPredicted RBP19■□□□□ 0.63
CTDP1-201ENST00000075430 ANKZF1Q9H8Y5 726 aa19■□□□□ 0.63
CTDP1-201ENST00000075430 ZPR1O75312 459 aa19■□□□□ 0.63
CTDP1-201ENST00000075430 EIF3JO75822 258 aaKnown RBP19■□□□□ 0.63
CTDP1-201ENST00000075430 KRT9P35527 623 aa19■□□□□ 0.63
CTDP1-201ENST00000075430 CASP8Q14790 479 aa19■□□□□ 0.63
CTDP1-201ENST00000075430 RTN1Q16799 776 aa19■□□□□ 0.63
CTDP1-201ENST00000075430 CHP1Q99653 195 aa19■□□□□ 0.63
CTDP1-201ENST00000075430 CDC23Q9UJX2 597 aa19■□□□□ 0.63
CTDP1-201ENST00000075430 ZMYM6O95789 1325 aa18.99■□□□□ 0.63
CTDP1-201ENST00000075430 MACROD2A1Z1Q3 448 aa18.99■□□□□ 0.63
CTDP1-201ENST00000075430 TOB1P50616 345 aaPredicted RBP18.99■□□□□ 0.63
CTDP1-201ENST00000075430 SYNRGQ9UMZ2 1314 aa18.99■□□□□ 0.63
CTDP1-201ENST00000075430 RNF225M0QZC1 329 aaPredicted RBP18.99■□□□□ 0.63
CTDP1-201ENST00000075430 MICALL1Q8N3F8 863 aa18.99■□□□□ 0.63
CTDP1-201ENST00000075430 NALCNQ8IZF0 1738 aa18.98■□□□□ 0.63
CTDP1-201ENST00000075430 SRCAPQ6ZRS2 3230 aa18.98■□□□□ 0.63
CTDP1-201ENST00000075430 RGPD2P0DJD1 1756 aa18.98■□□□□ 0.63
CTDP1-201ENST00000075430 CCDC151A5D8V7 595 aa18.98■□□□□ 0.63
CTDP1-201ENST00000075430 SH2B2O14492 632 aaPredicted RBP18.98■□□□□ 0.63
CTDP1-201ENST00000075430 RSRC2Q7L4I2 434 aaKnown RBP18.98■□□□□ 0.63
CTDP1-201ENST00000075430 KLHL34Q8N239 644 aa18.98■□□□□ 0.63
CTDP1-201ENST00000075430 MAP3K14Q99558 947 aa18.98■□□□□ 0.63
CTDP1-201ENST00000075430 NBPF3Q9H094 633 aa18.98■□□□□ 0.63
CTDP1-201ENST00000075430 HPSEQ9Y251 543 aa18.98■□□□□ 0.63
CTDP1-201ENST00000075430 GOLGA6L9A6NEM1 432 aa18.97■□□□□ 0.63
CTDP1-201ENST00000075430 H7C1W4 665 aa18.97■□□□□ 0.63
CTDP1-201ENST00000075430 ACSBG1Q96GR2 724 aa18.97■□□□□ 0.63
CTDP1-201ENST00000075430 EHD4Q9H223 541 aa18.97■□□□□ 0.63
CTDP1-201ENST00000075430 GREM2Q9H772 168 aa18.97■□□□□ 0.63
CTDP1-201ENST00000075430 JADE2Q9NQC1 790 aa18.97■□□□□ 0.63
CTDP1-201ENST00000075430 CYP2D7A0A087X1C5 515 aa18.97■□□□□ 0.63
CTDP1-201ENST00000075430 TULP2O00295 520 aa18.97■□□□□ 0.63
CTDP1-201ENST00000075430 GTF2A1P52655 376 aaPredicted RBP18.97■□□□□ 0.63
CTDP1-201ENST00000075430 MFSD6Q6ZSS7 791 aa18.97■□□□□ 0.63
CTDP1-201ENST00000075430 SDR42E1Q8WUS8 393 aa18.97■□□□□ 0.63
CTDP1-201ENST00000075430 DACH1Q9UI36 760 aa18.97■□□□□ 0.63
CTDP1-201ENST00000075430 LRRIQ3A6PVS8 624 aaPredicted RBP18.97■□□□□ 0.63
CTDP1-201ENST00000075430 UBXN1Q04323 297 aa18.97■□□□□ 0.63
CTDP1-201ENST00000075430 SF3A3Q12874 501 aaKnown RBP eCLIP18.97■□□□□ 0.635e-6■■■■■ 35.2
CTDP1-201ENST00000075430 WTAPQ15007 396 aa18.97■□□□□ 0.63
CTDP1-201ENST00000075430 ENOX2Q16206 610 aaKnown RBP18.97■□□□□ 0.63
CTDP1-201ENST00000075430 SRLQ86TD4 932 aa18.97■□□□□ 0.63
CTDP1-201ENST00000075430 V9GY48 417 aaPredicted RBP18.97■□□□□ 0.63
CTDP1-201ENST00000075430 ITGA6P23229 1130 aa18.96■□□□□ 0.63
CTDP1-201ENST00000075430 MCM7P33993 719 aa18.96■□□□□ 0.63
CTDP1-201ENST00000075430 BEND6Q5SZJ8 279 aaPredicted RBP18.96■□□□□ 0.63
CTDP1-201ENST00000075430 KIAA1328Q86T90 577 aa18.96■□□□□ 0.63
CTDP1-201ENST00000075430 GOLGA5Q8TBA6 731 aa18.96■□□□□ 0.63
CTDP1-201ENST00000075430 SYMPKQ92797 1274 aaKnown RBP18.96■□□□□ 0.63
CTDP1-201ENST00000075430 SMARCC1Q92922 1105 aaPredicted RBP18.96■□□□□ 0.63
CTDP1-201ENST00000075430 UBAC1Q9BSL1 405 aa18.96■□□□□ 0.63
CTDP1-201ENST00000075430 AKAP2Q9Y2D5 859 aa18.96■□□□□ 0.63
CTDP1-201ENST00000075430 PCDH11XQ9BZA7 1347 aa18.96■□□□□ 0.63
CTDP1-201ENST00000075430 PCDH11YQ9BZA8 1340 aa18.96■□□□□ 0.63
CTDP1-201ENST00000075430 A0A087X0B3 334 aa18.96■□□□□ 0.63
CTDP1-201ENST00000075430 PPP6R2O75170 966 aa18.96■□□□□ 0.63
CTDP1-201ENST00000075430 ADAMTS2O95450 1211 aa18.96■□□□□ 0.63
CTDP1-201ENST00000075430 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.96■□□□□ 0.63
CTDP1-201ENST00000075430 MLKLQ8NB16 471 aa18.96■□□□□ 0.63
CTDP1-201ENST00000075430 NAPGQ99747 312 aaPredicted RBP18.96■□□□□ 0.63
CTDP1-201ENST00000075430 FAM107BQ9H098 131 aa18.96■□□□□ 0.63
CTDP1-201ENST00000075430 LTN1O94822 1766 aa18.96■□□□□ 0.63
CTDP1-201ENST00000075430 STARD3NLO95772 234 aa18.96■□□□□ 0.63
CTDP1-201ENST00000075430 CTR9Q6PD62 1173 aa18.96■□□□□ 0.63
CTDP1-201ENST00000075430 CEP112Q8N8E3 955 aa18.96■□□□□ 0.63
CTDP1-201ENST00000075430 IPO4Q8TEX9 1081 aaKnown RBP18.96■□□□□ 0.63
CTDP1-201ENST00000075430 BTG4Q9NY30 223 aa18.96■□□□□ 0.63
CTDP1-201ENST00000075430 JAG2Q9Y219 1238 aa18.96■□□□□ 0.63
CTDP1-201ENST00000075430 ZNF185O15231 689 aa18.95■□□□□ 0.62
CTDP1-201ENST00000075430 LIG3P49916 1009 aa18.95■□□□□ 0.62
CTDP1-201ENST00000075430 CASP7P55210 303 aa18.95■□□□□ 0.62
CTDP1-201ENST00000075430 EARS2Q5JPH6 523 aaKnown RBP18.95■□□□□ 0.62
CTDP1-201ENST00000075430 GNL3LQ9NVN8 582 aaKnown RBP18.95■□□□□ 0.62
CTDP1-201ENST00000075430 SLC4A4Q9Y6R1 1079 aa18.95■□□□□ 0.62
CTDP1-201ENST00000075430 NFAT5O94916 1531 aa18.95■□□□□ 0.62
CTDP1-201ENST00000075430 NCAPD2Q15021 1401 aa18.95■□□□□ 0.62
CTDP1-201ENST00000075430 TRIM49BA6NDI0 452 aa18.95■□□□□ 0.62
CTDP1-201ENST00000075430 PDE6AP16499 860 aa18.95■□□□□ 0.62
CTDP1-201ENST00000075430 CYP27A1Q02318 531 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms