RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Liat1Q810M6 228 aa10.43□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Ercc6lQ8BHK9 1240 aa10.43□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Ccdc178Q8CDV0 866 aa10.43□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Znf24Q91VN1 368 aa10.43□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Ftsj3Q9DBE9 838 aaKnown RBP10.43□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Gli3Q61602 1583 aa10.43□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Itsn1Q9Z0R4 1714 aa10.43□□□□□ -0.74
Upf3b-201ENSMUST00000076265 PuraP42669 321 aaKnown RBP10.42□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Iqsec3Q3TES0 1195 aa10.42□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Ag2Q3UPL5 249 aa10.42□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Gucy2fQ5SDA5 1108 aa10.42□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Morc2aQ69ZX6 1030 aa10.42□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Wnk4Q80UE6 1222 aa10.42□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Epn2Q8CHU3 595 aa10.42□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Rpap3Q9D706 660 aa10.42□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Hic2Q9JLZ6 619 aaKnown RBP10.42□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Igbp1bQ9QZ29 343 aa10.42□□□□□ -0.74
Upf3b-201ENSMUST00000076265 PtprgQ05909 1442 aa10.42□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Pcna-ps2A0A140T8V5 261 aa10.42□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Slfn8B1ARD8 910 aa10.42□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Ccdc13D3YV10 709 aa10.42□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Olfr67F8VPJ8 320 aa10.42□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Foxd2O35392 492 aa10.42□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Clk2O35491 499 aa10.42□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Rab33aP97950 237 aa10.42□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Ddx49Q4FZF3 480 aaKnown RBP10.42□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Krt12Q64291 487 aa10.42□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Acap3Q6NXL5 833 aa10.42□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Fam126aQ6P9N1 521 aa10.42□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Mapre3Q6PER3 281 aa10.42□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Ldhal6bQ8BVP2 382 aa10.42□□□□□ -0.74
Upf3b-201ENSMUST00000076265 VcpkmtQ8C436 228 aa10.42□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Terf2ipQ91VL8 393 aa10.42□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Mapk8Q91Y86 384 aa10.42□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Cmtr1Q9DBC3 837 aa10.42□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Speer3W4VSP1 261 aa10.42□□□□□ -0.74
Upf3b-201ENSMUST00000076265 PzpQ61838 1495 aa10.42□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Cbfa2t3O54972 620 aa10.41□□□□□ -0.74
Upf3b-201ENSMUST00000076265 RxrgP28705 463 aa10.41□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Tdo2P48776 406 aa10.41□□□□□ -0.74
Upf3b-201ENSMUST00000076265 MuskQ61006 868 aa10.41□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Trpc6Q61143 930 aa10.41□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Klra3Q64329 266 aa10.41□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Gemin8Q8BHE1 238 aa10.41□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Pacs1Q8K212 961 aa10.41□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Pom121Q8K3Z9 1200 aa10.41□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Epn3Q91W69 636 aa10.41□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Asic2Q925H0 512 aa10.41□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Fut2Q9JL27 347 aa10.41□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Kif13aQ9EQW7 1749 aa10.41□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Gprasp1Q5U4C1 1347 aa10.41□□□□□ -0.74
Upf3b-201ENSMUST00000076265 B1ARW8 110 aa10.41□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Znf568E9PYI1 671 aa10.41□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Hspa1lP16627 641 aa10.41□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Phf21aQ6ZPK0 659 aa10.41□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Maco1Q7TQE6 664 aaKnown RBP10.41□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Ankrd52Q8BTI7 1076 aa10.41□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Tmx4Q8C0L0 335 aa10.41□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Fez1Q8K0X8 392 aa10.41□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Hs2st1Q8R3H7 356 aa10.41□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Gbp7Q91Z40 638 aa10.41□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Q9CYI0 393 aa10.41□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Naip7Q9JIB3 1402 aa10.41□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Ino80Q6ZPV2 1559 aa10.41□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Lamc1P02468 1607 aaKnown RBP10.4□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Syce3B5KM66 88 aa10.4□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Ccdc74aE9Q9U8 364 aa10.4□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Gm44G3UW88 330 aa10.4□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Atp2b1G5E829 1220 aa10.4□□□□□ -0.74
Upf3b-201ENSMUST00000076265 DnttP09838 530 aa10.4□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Col6a1Q04857 1025 aa10.4□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Lsmem1Q3UQS2 128 aa10.4□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Ubn1Q4G0F8 1135 aa10.4□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Ankrd13bQ5F259 626 aa10.4□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Krt15Q61414 452 aa10.4□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Mettl3Q8C3P7 580 aa10.4□□□□□ -0.74
Upf3b-201ENSMUST00000076265 BrdtQ91Y44 956 aa10.4□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Syap1Q9D5V6 365 aa10.4□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Clip2Q9Z0H8 1047 aa10.4□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Tecpr2Q3UH45 1423 aa10.4□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Per1O35973 1291 aa10.4□□□□□ -0.74
Upf3b-201ENSMUST00000076265 PrlP06879 226 aa10.4□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Brsk1Q5RJI5 778 aa10.4□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Zranb1Q7M760 708 aa10.4□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Taok3Q8BYC6 898 aa10.4□□□□□ -0.74
Upf3b-201ENSMUST00000076265 GlyctkQ8QZY2 523 aa10.4□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Tmem119Q8R138 280 aa10.4□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Pde6cQ91ZQ1 861 aa10.4□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Znf287Q9EQB9 759 aa10.4□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Ddx24Q9ESV0 857 aaKnown RBP10.4□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Fbxw5Q9QXW2 573 aa10.4□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Prpf40aQ9R1C7 953 aaKnown RBP10.4□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Nrxn3Q6P9K9 1571 aa10.4□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Efcab6Q6P1E8 1516 aa10.39□□□□□ -0.75
Upf3b-201ENSMUST00000076265 IghaA0A0A6YXW6 389 aa10.39□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Otud7bB2RUR8 840 aa10.39□□□□□ -0.75
Upf3b-201ENSMUST00000076265 E9Q0B3 247 aa10.39□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Irf3P70671 419 aa10.39□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Aplp1Q03157 653 aa10.39□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Zp3rQ60736 579 aa10.39□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 32 ms