RNA–Protein interactions for RNA: ENSMUST00000022328.13

Ldb3-202, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 2,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-202ENSMUST00000022328 Srp68Q8BMA6 625 aaKnown RBP12.56□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Sde2Q8K1J5 448 aaKnown RBP12.56□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Cep89Q9CZX2 791 aa12.56□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Ccdc39Q9D5Y1 937 aa12.56□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Xpo4Q9ESJ0 1151 aa12.56□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Eif4enif1Q9EST3 983 aaKnown RBP12.56□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Dctpp1Q9QY93 170 aa12.56□□□□□ -0.4
Ldb3-202ENSMUST00000022328 AfdnQ9QZQ1 1820 aaKnown RBP12.56□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Myh4Q5SX39 1939 aa12.56□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Atp8b5A3FIN4 1183 aa12.55□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Zscan20B2KFW1 1030 aa12.55□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Kif1bpQ6ZPU9 617 aa12.55□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Pus7lQ8CE46 702 aa12.55□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Ccdc96Q9CR92 584 aa12.55□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Etnk1Q9D4V0 363 aa12.55□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Vnn1Q9Z0K8 512 aa12.55□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Gm11983V9GXS8 105 aa12.55□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Map3k15A2AQW0 1331 aa12.55□□□□□ -0.4
Ldb3-202ENSMUST00000022328 CoblQ5NBX1 1337 aaKnown RBP12.55□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Lcmt1A0A0U1RNF2 332 aa12.55□□□□□ -0.4
Ldb3-202ENSMUST00000022328 MbipQ99LQ1 341 aa12.55□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Adarb2Q9JI20 745 aa12.55□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Pnpla6Q3TRM4 1355 aa12.55□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Rbbp6P97868 1790 aaKnown RBP12.54□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Cyp3a25O09158 503 aa12.54□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Fam89aQ14BJ1 175 aa12.54□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Ccdc34Q3UI66 367 aa12.54□□□□□ -0.4
Ldb3-202ENSMUST00000022328 QarsQ8BML9 775 aa12.54□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Q8BT18 775 aa12.54□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Myh6Q02566 1938 aaKnown RBP12.54□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Samd1D3YXK1 519 aa12.54□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Abl1P00520 1123 aa12.54□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Myo1bP46735 1107 aa12.54□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Anks1aP59672 1150 aa12.54□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Gm5592Q3V0A6 857 aa12.54□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Usp13Q5BKP2 858 aa12.54□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Cep120Q7TSG1 988 aa12.54□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Smc2Q8CG48 1191 aaKnown RBP12.54□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Afg3l2Q8JZQ2 802 aaKnown RBP12.54□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Prpf3Q922U1 683 aaKnown RBP12.54□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Krt23Q99PS0 422 aa12.54□□□□□ -0.4
Ldb3-202ENSMUST00000022328 1700018B08RikQ9DA83 213 aa12.54□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Pik3ap1Q9EQ32 811 aa12.54□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Ktn1Q61595 1327 aaKnown RBP12.54□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Prr16A3KMN5 304 aa12.53□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Grin1P35438 938 aa12.53□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Slc7a1Q09143 622 aa12.53□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Lrriq3Q14DL3 633 aa12.53□□□□□ -0.4
Ldb3-202ENSMUST00000022328 SfswapQ3USH5 945 aaKnown RBP12.53□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Znf653Q6YND2 615 aa12.53□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Clec16aQ80U30 1036 aa12.53□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Slc20a2Q80UP8 656 aa12.53□□□□□ -0.4
Ldb3-202ENSMUST00000022328 HlfQ8BW74 295 aa12.53□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Rbm33Q9CXK9 1231 aaKnown RBP12.53□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Tktl2Q9D4D4 627 aa12.53□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Letm1Q9Z2I0 738 aa12.53□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Arfgef1G3X9K3 1846 aaKnown RBP12.53□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Adgra3Q7TT36 1310 aa12.53□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Zfyve9A2A8R0 1397 aa12.53□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Phrf1A6H619 1682 aa12.53□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Prss40A6H6T1 365 aa12.53□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Gm7347D3YYI9 267 aa12.53□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Speer4aF8VPX6 267 aa12.53□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Calm1P0DP26 149 aaKnown RBP12.53□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Calm2P0DP27 149 aaKnown RBP12.53□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Calm3P0DP28 149 aaKnown RBP12.53□□□□□ -0.4
Ldb3-202ENSMUST00000022328 H2afxP27661 143 aaKnown RBP12.53□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Nbr1P97432 988 aa12.53□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Olfr119Q7TRJ5 321 aa12.53□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Tfcp2Q9ERA0 502 aa12.53□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Hic2Q9JLZ6 619 aaKnown RBP12.53□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Tob2Q9JM55 345 aa12.53□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Nek3Q9R0A5 511 aa12.53□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Znf609Q8BZ47 1413 aa12.53□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Pet2A2AHY8 747 aa12.52□□□□□ -0.4
Ldb3-202ENSMUST00000022328 InhbeO08717 350 aa12.52□□□□□ -0.4
Ldb3-202ENSMUST00000022328 TbcaP48428 108 aaKnown RBP12.52□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Kcnd1Q03719 651 aa12.52□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Spag5Q7TME2 1165 aa12.52□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Emilin2Q8K482 1074 aa12.52□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Mrps25Q9D125 171 aaKnown RBP12.52□□□□□ -0.4
Ldb3-202ENSMUST00000022328 Atp12aQ9Z1W8 1035 aa12.52□□□□□ -0.4
Ldb3-202ENSMUST00000022328 SsbP32067 415 aaKnown RBP12.52□□□□□ -0.41
Ldb3-202ENSMUST00000022328 Traf3ip1Q149C2 625 aa12.52□□□□□ -0.41
Ldb3-202ENSMUST00000022328 Esyt2Q3TZZ7 845 aa12.52□□□□□ -0.41
Ldb3-202ENSMUST00000022328 Tmtc2Q56A06 836 aa12.52□□□□□ -0.41
Ldb3-202ENSMUST00000022328 Cyp4x1Q6A152 507 aa12.52□□□□□ -0.41
Ldb3-202ENSMUST00000022328 Rbm28Q8CGC6 750 aaKnown RBP12.52□□□□□ -0.41
Ldb3-202ENSMUST00000022328 Ubac1Q8VDI7 409 aa12.52□□□□□ -0.41
Ldb3-202ENSMUST00000022328 RtcbQ99LF4 505 aaKnown RBP12.52□□□□□ -0.41
Ldb3-202ENSMUST00000022328 Acad12D3Z7X0 555 aa12.51□□□□□ -0.41
Ldb3-202ENSMUST00000022328 Aknad1E9Q8N6 675 aa12.51□□□□□ -0.41
Ldb3-202ENSMUST00000022328 Ppfibp2O35711 882 aa12.51□□□□□ -0.41
Ldb3-202ENSMUST00000022328 Fam83bQ0VBM2 1012 aa12.51□□□□□ -0.41
Ldb3-202ENSMUST00000022328 Luc7l2Q7TNC4 392 aaKnown RBP12.51□□□□□ -0.41
Ldb3-202ENSMUST00000022328 Dhx8A2A4P0 1244 aaKnown RBP12.51□□□□□ -0.41
Ldb3-202ENSMUST00000022328 4930523C07RikE9Q2T4 99 aa12.51□□□□□ -0.41
Ldb3-202ENSMUST00000022328 Anp32eP97822 260 aaKnown RBP12.51□□□□□ -0.41
Ldb3-202ENSMUST00000022328 Rtel1Q0VGM9 1203 aa12.51□□□□□ -0.41
Ldb3-202ENSMUST00000022328 Ttll4Q80UG8 1193 aa12.51□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 32.9 ms