RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Fam89aQ14BJ1 175 aa18.42■□□□□ 0.54
Trim28-201ENSMUST00000005705 Gga3Q8BMI3 718 aa18.42■□□□□ 0.54
Trim28-201ENSMUST00000005705 Ankk1Q8BZ25 745 aa18.42■□□□□ 0.54
Trim28-201ENSMUST00000005705 Ppp4r3bQ922R5 820 aa18.42■□□□□ 0.54
Trim28-201ENSMUST00000005705 Tgs1Q923W1 853 aa18.42■□□□□ 0.54
Trim28-201ENSMUST00000005705 Znf704Q9ERQ3 566 aa18.42■□□□□ 0.54
Trim28-201ENSMUST00000005705 Plekho1Q9JIY0 408 aa18.42■□□□□ 0.54
Trim28-201ENSMUST00000005705 Akap11E9Q777 1895 aa18.42■□□□□ 0.54
Trim28-201ENSMUST00000005705 Dennd3A2RT67 1274 aa18.42■□□□□ 0.54
Trim28-201ENSMUST00000005705 Atp8b5A3FIN4 1183 aa18.42■□□□□ 0.54
Trim28-201ENSMUST00000005705 Pde11aP0C1Q2 933 aa18.42■□□□□ 0.54
Trim28-201ENSMUST00000005705 Ranbp1P34022 203 aaKnown RBP18.42■□□□□ 0.54
Trim28-201ENSMUST00000005705 Adck5Q80V03 582 aa18.42■□□□□ 0.54
Trim28-201ENSMUST00000005705 Slc39a11Q8BWY7 342 aa18.42■□□□□ 0.54
Trim28-201ENSMUST00000005705 Stn1Q8K2X3 378 aa18.42■□□□□ 0.54
Trim28-201ENSMUST00000005705 Znf131Q8K3J5 619 aa18.42■□□□□ 0.54
Trim28-201ENSMUST00000005705 Pcdhb22Q91XZ8 794 aa18.42■□□□□ 0.54
Trim28-201ENSMUST00000005705 Cbx6Q9DBY5 414 aa18.42■□□□□ 0.54
Trim28-201ENSMUST00000005705 Stk39Q9Z1W9 556 aa18.42■□□□□ 0.54
Trim28-201ENSMUST00000005705 Prr16A3KMN5 304 aa18.41■□□□□ 0.54
Trim28-201ENSMUST00000005705 Tpm3-rs7D3Z2H9 248 aa18.41■□□□□ 0.54
Trim28-201ENSMUST00000005705 Celf1P28659 486 aaKnown RBP18.41■□□□□ 0.54
Trim28-201ENSMUST00000005705 Mxd3Q80US8 206 aa18.41■□□□□ 0.54
Trim28-201ENSMUST00000005705 Tcp11l1Q8BTG3 509 aa18.41■□□□□ 0.54
Trim28-201ENSMUST00000005705 Filip1Q9CS72 1211 aa18.41■□□□□ 0.54
Trim28-201ENSMUST00000005705 Ltbp4Q8K4G1 1666 aa18.41■□□□□ 0.54
Trim28-201ENSMUST00000005705 Casz1Q9CWL2 1761 aa18.41■□□□□ 0.54
Trim28-201ENSMUST00000005705 Naaladl2A0A0N4SUJ3 795 aa18.41■□□□□ 0.54
Trim28-201ENSMUST00000005705 Arhgap4B1AUY3 965 aa18.41■□□□□ 0.54
Trim28-201ENSMUST00000005705 Exoc3l2D3YUP5 789 aa18.41■□□□□ 0.54
Trim28-201ENSMUST00000005705 Esco1Q69Z69 843 aa18.41■□□□□ 0.54
Trim28-201ENSMUST00000005705 Taf6lQ8R2K4 616 aa18.41■□□□□ 0.54
Trim28-201ENSMUST00000005705 Letm1Q9Z2I0 738 aa18.41■□□□□ 0.54
Trim28-201ENSMUST00000005705 Tnrc6cQ3UHC0 1690 aaKnown RBP18.41■□□□□ 0.54
Trim28-201ENSMUST00000005705 CltaO08585 235 aa18.4■□□□□ 0.54
Trim28-201ENSMUST00000005705 Plcb3P51432 1234 aaKnown RBP18.4■□□□□ 0.54
Trim28-201ENSMUST00000005705 Ppp1r21Q3TDD9 780 aa18.4■□□□□ 0.54
Trim28-201ENSMUST00000005705 Cdkl5Q3UTQ8 938 aa18.4■□□□□ 0.54
Trim28-201ENSMUST00000005705 Cyp7b1Q60991 507 aa18.4■□□□□ 0.54
Trim28-201ENSMUST00000005705 Gja3Q64448 417 aa18.4■□□□□ 0.54
Trim28-201ENSMUST00000005705 Homer1Q9Z2Y3 366 aa18.4■□□□□ 0.54
Trim28-201ENSMUST00000005705 Cep85Q8BMK0 761 aa18.4■□□□□ 0.54
Trim28-201ENSMUST00000005705 Gimap5Q8BWF2 308 aa18.4■□□□□ 0.54
Trim28-201ENSMUST00000005705 Irs4Q9Z0Y7 1216 aa18.4■□□□□ 0.54
Trim28-201ENSMUST00000005705 A0A1W2P6Q8 802 aa18.39■□□□□ 0.53
Trim28-201ENSMUST00000005705 Gm9048A0A1W2P7H4 802 aa18.39■□□□□ 0.53
Trim28-201ENSMUST00000005705 A0A1W2P7S8 802 aa18.39■□□□□ 0.53
Trim28-201ENSMUST00000005705 A0A1W2P7Z8 802 aa18.39■□□□□ 0.53
Trim28-201ENSMUST00000005705 Gm9046A0A1W2P855 802 aa18.39■□□□□ 0.53
Trim28-201ENSMUST00000005705 Erich4Q3UNU4 136 aa18.39■□□□□ 0.53
Trim28-201ENSMUST00000005705 Tshz1Q5DTH5 1084 aa18.39■□□□□ 0.53
Trim28-201ENSMUST00000005705 Cdc5lQ6A068 802 aaKnown RBP18.39■□□□□ 0.53
Trim28-201ENSMUST00000005705 Dnph1Q80VJ3 173 aa18.39■□□□□ 0.53
Trim28-201ENSMUST00000005705 Ccdc150Q8CDI7 1110 aa18.39■□□□□ 0.53
Trim28-201ENSMUST00000005705 Rbm5Q91YE7 815 aaKnown RBP18.39■□□□□ 0.53
Trim28-201ENSMUST00000005705 Dbndd1Q9CZ00 160 aa18.39■□□□□ 0.53
Trim28-201ENSMUST00000005705 Dctpp1Q9QY93 170 aa18.39■□□□□ 0.53
Trim28-201ENSMUST00000005705 Kdm3aQ6PCM1 1323 aa18.39■□□□□ 0.53
Trim28-201ENSMUST00000005705 Apol7aB2RT54 418 aa18.39■□□□□ 0.53
Trim28-201ENSMUST00000005705 Gucy1a2F8VQK3 730 aa18.39■□□□□ 0.53
Trim28-201ENSMUST00000005705 Speer4dL7N216 212 aa18.39■□□□□ 0.53
Trim28-201ENSMUST00000005705 Caps2Q8BUG5 550 aa18.39■□□□□ 0.53
Trim28-201ENSMUST00000005705 Sirt2Q8VDQ8 389 aa18.39■□□□□ 0.53
Trim28-201ENSMUST00000005705 Cnpy3Q9DAU1 276 aa18.39■□□□□ 0.53
Trim28-201ENSMUST00000005705 Vps37dQ810I0 261 aa18.38■□□□□ 0.53
Trim28-201ENSMUST00000005705 Epha10Q8BYG9 1007 aa18.38■□□□□ 0.53
Trim28-201ENSMUST00000005705 Terb1Q8C0V1 768 aa18.38■□□□□ 0.53
Trim28-201ENSMUST00000005705 Ppil4Q9CXG3 492 aaKnown RBP18.38■□□□□ 0.53
Trim28-201ENSMUST00000005705 Arpp21Q9DCB4 807 aa18.38■□□□□ 0.53
Trim28-201ENSMUST00000005705 Slc27a1Q60714 646 aa18.38■□□□□ 0.53
Trim28-201ENSMUST00000005705 Map3k11Q80XI6 850 aa18.38■□□□□ 0.53
Trim28-201ENSMUST00000005705 Thap2Q9D305 217 aa18.38■□□□□ 0.53
Trim28-201ENSMUST00000005705 DccP70211 1447 aa18.38■□□□□ 0.53
Trim28-201ENSMUST00000005705 Gm36210A0A1B0GS00 229 aa18.38■□□□□ 0.53
Trim28-201ENSMUST00000005705 Rbm15bQ6PHZ5 887 aaKnown RBP18.38■□□□□ 0.53
Trim28-201ENSMUST00000005705 Ano2Q8CFW1 1002 aa18.38■□□□□ 0.53
Trim28-201ENSMUST00000005705 Tcp11l2Q8K1H7 517 aa18.38■□□□□ 0.53
Trim28-201ENSMUST00000005705 Foxo4Q9WVH3 505 aa18.38■□□□□ 0.53
Trim28-201ENSMUST00000005705 Kcnh4A2A5F7 1018 aa18.37■□□□□ 0.53
Trim28-201ENSMUST00000005705 Ccdc191J3QQ27 883 aa18.37■□□□□ 0.53
Trim28-201ENSMUST00000005705 Lrriq3Q14DL3 633 aa18.37■□□□□ 0.53
Trim28-201ENSMUST00000005705 Arhgef16Q3U5C8 713 aa18.37■□□□□ 0.53
Trim28-201ENSMUST00000005705 ParvgQ9ERD8 331 aa18.37■□□□□ 0.53
Trim28-201ENSMUST00000005705 Cbx8Q9QXV1 362 aa18.37■□□□□ 0.53
Trim28-201ENSMUST00000005705 Pde4dQ01063 747 aa18.37■□□□□ 0.53
Trim28-201ENSMUST00000005705 Recql4Q75NR7 1216 aaKnown RBP18.37■□□□□ 0.53
Trim28-201ENSMUST00000005705 Snd1Q78PY7 910 aaKnown RBP18.37■□□□□ 0.53
Trim28-201ENSMUST00000005705 Dynll2Q9D0M5 89 aa18.37■□□□□ 0.53
Trim28-201ENSMUST00000005705 Nav1Q8CH77 1875 aa18.36■□□□□ 0.53
Trim28-201ENSMUST00000005705 Kcnd1Q03719 651 aa18.36■□□□□ 0.53
Trim28-201ENSMUST00000005705 Wdr70Q3TWF6 657 aa18.36■□□□□ 0.53
Trim28-201ENSMUST00000005705 Jakmip3Q5DTN8 844 aa18.36■□□□□ 0.53
Trim28-201ENSMUST00000005705 RragbQ6NTA4 374 aa18.36■□□□□ 0.53
Trim28-201ENSMUST00000005705 Nat10Q8K224 1024 aaKnown RBP18.36■□□□□ 0.53
Trim28-201ENSMUST00000005705 Riok1Q922Q2 567 aa18.36■□□□□ 0.53
Trim28-201ENSMUST00000005705 Golga5Q9QYE6 729 aa18.36■□□□□ 0.53
Trim28-201ENSMUST00000005705 Vstm4T1NXB5 319 aa18.36■□□□□ 0.53
Trim28-201ENSMUST00000005705 Carmil3Q3UFQ8 1375 aa18.36■□□□□ 0.53
Trim28-201ENSMUST00000005705 Gpt2Q8BGT5 522 aa18.36■□□□□ 0.53
Trim28-201ENSMUST00000005705 Ube3bQ9ES34 1070 aa18.36■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 39.2 ms