RNA–Protein interactions for RNA: ENSMUST00000192168.1

Pcdha5-201, Transcript of Protocadherin alpha 5, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha5, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha5-201ENSMUST00000192168 AtrQ9JKK8 2635 aa8.95□□□□□ -0.98
Pcdha5-201ENSMUST00000192168 Nsd1O88491 2588 aaKnown RBP8.93□□□□□ -0.98
Pcdha5-201ENSMUST00000192168 Gm7138L7N2C3 230 aa8.93□□□□□ -0.98
Pcdha5-201ENSMUST00000192168 Gm3238W4VSP7 230 aa8.93□□□□□ -0.98
Pcdha5-201ENSMUST00000192168 Cep350E9Q309 3095 aa8.93□□□□□ -0.98
Pcdha5-201ENSMUST00000192168 Gm2310J3QNJ2 377 aa8.92□□□□□ -0.98
Pcdha5-201ENSMUST00000192168 Map1aQ9QYR6 2776 aa8.9□□□□□ -0.98
Pcdha5-201ENSMUST00000192168 Usp24B1AY13 2617 aaKnown RBP8.89□□□□□ -0.99
Pcdha5-201ENSMUST00000192168 Tnrc18Q80WC3 2878 aa8.88□□□□□ -0.99
Pcdha5-201ENSMUST00000192168 Krtap29-1A2A5X4 342 aa8.87□□□□□ -0.99
Pcdha5-201ENSMUST00000192168 Romo1P60603 79 aa8.84□□□□□ -0.99
Pcdha5-201ENSMUST00000192168 Prune2Q52KR3 3084 aa8.84□□□□□ -0.99
Pcdha5-201ENSMUST00000192168 HrnrQ8VHD8 2496 aa8.84□□□□□ -0.99
Pcdha5-201ENSMUST00000192168 Rpl37Q9D823 97 aa8.83□□□□□ -1
Pcdha5-201ENSMUST00000192168 Hectd1Q69ZR2 2618 aaKnown RBP8.82□□□□□ -1
Pcdha5-201ENSMUST00000192168 Itpr1P11881 2749 aa8.8□□□□□ -1
Pcdha5-201ENSMUST00000192168 Gm7173A0A0G2JEB6 3132 aa8.76□□□□□ -1.01
Pcdha5-201ENSMUST00000192168 NipblQ6KCD5 2798 aaKnown RBP8.75□□□□□ -1.01
Pcdha5-201ENSMUST00000192168 Fn1P11276 2477 aaKnown RBP8.74□□□□□ -1.01
Pcdha5-201ENSMUST00000192168 Kmt2bO08550 2713 aa8.74□□□□□ -1.01
Pcdha5-201ENSMUST00000192168 Notch1Q01705 2531 aa8.73□□□□□ -1.01
Pcdha5-201ENSMUST00000192168 Myo15bI7HPW8 3033 aa8.73□□□□□ -1.01
Pcdha5-201ENSMUST00000192168 Lama3Q61789 3330 aa8.71□□□□□ -1.02
Pcdha5-201ENSMUST00000192168 Gm7137J3QMW1 236 aa8.71□□□□□ -1.02
Pcdha5-201ENSMUST00000192168 Spink7Q6IE32 76 aa8.69□□□□□ -1.02
Pcdha5-201ENSMUST00000192168 Gm9508A0A1W2P7W0 230 aa8.69□□□□□ -1.02
Pcdha5-201ENSMUST00000192168 Gm17349F7BGH6 99 aa8.66□□□□□ -1.02
Pcdha5-201ENSMUST00000192168 Gm10382Q3V0T5 144 aa8.66□□□□□ -1.02
Pcdha5-201ENSMUST00000192168 Cox6b2Q80ZN9 88 aa8.65□□□□□ -1.03
Pcdha5-201ENSMUST00000192168 Chd7A2AJK6 2986 aaKnown RBP8.65□□□□□ -1.03
Pcdha5-201ENSMUST00000192168 Akap13E9Q394 2776 aa8.64□□□□□ -1.03
Pcdha5-201ENSMUST00000192168 Gm5767A0A0J9YTU8 78 aa8.63□□□□□ -1.03
Pcdha5-201ENSMUST00000192168 Krtap15-1Q9QZU5 150 aa8.63□□□□□ -1.03
Pcdha5-201ENSMUST00000192168 2310050C09RikG5E8Z3 280 aa8.62□□□□□ -1.03
Pcdha5-201ENSMUST00000192168 Mast4Q811L6 2618 aa8.61□□□□□ -1.03
Pcdha5-201ENSMUST00000192168 Rps29P62274 56 aa8.6□□□□□ -1.03
Pcdha5-201ENSMUST00000192168 Jbts17Q8CE72 3214 aa8.59□□□□□ -1.03
Pcdha5-201ENSMUST00000192168 Stab1Q8R4Y4 2571 aa8.58□□□□□ -1.04
Pcdha5-201ENSMUST00000192168 Camk2n1Q6QWF9 78 aa8.57□□□□□ -1.04
Pcdha5-201ENSMUST00000192168 Mki67E9PVX6 3177 aaKnown RBP8.55□□□□□ -1.04
Pcdha5-201ENSMUST00000192168 2310061N02RikQ9D6S9 174 aa8.54□□□□□ -1.04
Pcdha5-201ENSMUST00000192168 BC029722A0A0N4SW31 51 aa8.53□□□□□ -1.04
Pcdha5-201ENSMUST00000192168 Fam229aB2KGE5 128 aa8.53□□□□□ -1.04
Pcdha5-201ENSMUST00000192168 Gm36176A0A1W2P8D5 158 aa8.52□□□□□ -1.04
Pcdha5-201ENSMUST00000192168 Tnp2P11378 117 aa8.5□□□□□ -1.05
Pcdha5-201ENSMUST00000192168 Krtap14O08640 167 aa8.49□□□□□ -1.05
Pcdha5-201ENSMUST00000192168 Bod1lE9Q6J5 3032 aa8.49□□□□□ -1.05
Pcdha5-201ENSMUST00000192168 Col12a1Q60847 3120 aa8.49□□□□□ -1.05
Pcdha5-201ENSMUST00000192168 Chd6A3KFM7 2711 aa8.48□□□□□ -1.05
Pcdha5-201ENSMUST00000192168 HttP42859 3119 aa8.47□□□□□ -1.05
Pcdha5-201ENSMUST00000192168 Gm19426M0QWC7 77 aa8.46□□□□□ -1.06
Pcdha5-201ENSMUST00000192168 Sec61bQ9CQS8 96 aaKnown RBP8.44□□□□□ -1.06
Pcdha5-201ENSMUST00000192168 D6Ertd527eA0A0N4SWI3 464 aa8.44□□□□□ -1.06
Pcdha5-201ENSMUST00000192168 Usp34Q6ZQ93 3582 aa8.44□□□□□ -1.06
Pcdha5-201ENSMUST00000192168 Igsf10Q3V1M1 2594 aa8.42□□□□□ -1.06
Pcdha5-201ENSMUST00000192168 Krtap13O88375 197 aa8.41□□□□□ -1.06
Pcdha5-201ENSMUST00000192168 Dmxl1Q6PNC0 3013 aa8.41□□□□□ -1.06
Pcdha5-201ENSMUST00000192168 Fbn2Q61555 2907 aa8.4□□□□□ -1.06
Pcdha5-201ENSMUST00000192168 Ubr5Q80TP3 2792 aa8.4□□□□□ -1.06
Pcdha5-201ENSMUST00000192168 Ash1lQ99MY8 2958 aa8.39□□□□□ -1.07
Pcdha5-201ENSMUST00000192168 MgaA2AWL7 3003 aaKnown RBP8.38□□□□□ -1.07
Pcdha5-201ENSMUST00000192168 Itpr3P70227 2670 aa8.38□□□□□ -1.07
Pcdha5-201ENSMUST00000192168 KalrnA2CG49 2964 aa8.37□□□□□ -1.07
Pcdha5-201ENSMUST00000192168 Rev3lQ61493 3122 aa8.35□□□□□ -1.07
Pcdha5-201ENSMUST00000192168 Tep1P97499 2629 aa8.35□□□□□ -1.07
Pcdha5-201ENSMUST00000192168 Cfap54Q8C6S9 3106 aa8.33□□□□□ -1.08
Pcdha5-201ENSMUST00000192168 Ranbp2Q9ERU9 3053 aaKnown RBP8.29□□□□□ -1.08
Pcdha5-201ENSMUST00000192168 Stab2Q8R4U0 2559 aa8.26□□□□□ -1.09
Pcdha5-201ENSMUST00000192168 Col6a5A6H584 2640 aa8.25□□□□□ -1.09
Pcdha5-201ENSMUST00000192168 9530053A07RikE9PVG8 2581 aa8.24□□□□□ -1.09
Pcdha5-201ENSMUST00000192168 AtmQ62388 3066 aa8.23□□□□□ -1.09
Pcdha5-201ENSMUST00000192168 Muc2Q80Z19 2680 aa8.23□□□□□ -1.09
Pcdha5-201ENSMUST00000192168 Ndufaf8A2AMZ4 74 aa8.22□□□□□ -1.09
Pcdha5-201ENSMUST00000192168 Pkd1l1Q8R526 2615 aa8.21□□□□□ -1.1
Pcdha5-201ENSMUST00000192168 Gm9507D3Z5T3 223 aa8.18□□□□□ -1.1
Pcdha5-201ENSMUST00000192168 Gm40193A0A1B0GT39 78 aa8.17□□□□□ -1.1
Pcdha5-201ENSMUST00000192168 Nbeal2Q6ZQA0 2742 aa8.16□□□□□ -1.1
Pcdha5-201ENSMUST00000192168 AspmQ8CJ27 3122 aa8.14□□□□□ -1.11
Pcdha5-201ENSMUST00000192168 TgO08710 2766 aa8.13□□□□□ -1.11
Pcdha5-201ENSMUST00000192168 Vps13aQ5H8C4 3166 aa8.12□□□□□ -1.11
Pcdha5-201ENSMUST00000192168 Cdh23Q99PF4 3354 aa8.12□□□□□ -1.11
Pcdha5-201ENSMUST00000192168 Hivep1Q03172 2688 aa8.07□□□□□ -1.12
Pcdha5-201ENSMUST00000192168 Gm20537G3UYK7 97 aa8.06□□□□□ -1.12
Pcdha5-201ENSMUST00000192168 A930033H14RikG5E8X6 103 aa8.05□□□□□ -1.12
Pcdha5-201ENSMUST00000192168 Krtap10-4Q08EG8 221 aa8.01□□□□□ -1.13
Pcdha5-201ENSMUST00000192168 Lrrc37aB1AWG4 3215 aa7.99□□□□□ -1.13
Pcdha5-201ENSMUST00000192168 Gm21887J3QQ04 176 aa7.98□□□□□ -1.13
Pcdha5-201ENSMUST00000192168 2310079G19RikQ9D6L6 185 aa7.97□□□□□ -1.13
Pcdha5-201ENSMUST00000192168 Tex15F8VPN2 2785 aa7.96□□□□□ -1.14
Pcdha5-201ENSMUST00000192168 Itpr2Q9Z329 2701 aa7.96□□□□□ -1.14
Pcdha5-201ENSMUST00000192168 ApcQ61315 2845 aa7.95□□□□□ -1.14
Pcdha5-201ENSMUST00000192168 Gm9112A2AI92 75 aa7.95□□□□□ -1.14
Pcdha5-201ENSMUST00000192168 Utp20Q5XG71 2788 aaKnown RBP7.95□□□□□ -1.14
Pcdha5-201ENSMUST00000192168 Celsr1O35161 3034 aa7.94□□□□□ -1.14
Pcdha5-201ENSMUST00000192168 Szt2A2A9C3 3431 aa7.94□□□□□ -1.14
Pcdha5-201ENSMUST00000192168 Srrm2Q8BTI8 2703 aaKnown RBP7.91□□□□□ -1.14
Pcdha5-201ENSMUST00000192168 FryE9Q8I9 3020 aa7.9□□□□□ -1.14
Pcdha5-201ENSMUST00000192168 Krtap10-10A0A1W2P7T6 217 aa7.88□□□□□ -1.15
Pcdha5-201ENSMUST00000192168 BptfA2A654 3036 aaKnown RBP7.88□□□□□ -1.15
Pcdha5-201ENSMUST00000192168 Unc80Q8BLN6 3261 aa7.85□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 53.3 ms