RNA–Protein interactions for RNA: ENSMUST00000115657.9

Pcdha11-202, Transcript of Protocadherin alpha 11, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha11, Length 5,360 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11-202ENSMUST00000115657 Nsd1O88491 2588 aaKnown RBP8.85□□□□□ -0.99
Pcdha11-202ENSMUST00000115657 Gm3646F6S692 53 aa8.85□□□□□ -0.99
Pcdha11-202ENSMUST00000115657 Map1aQ9QYR6 2776 aa8.81□□□□□ -1
Pcdha11-202ENSMUST00000115657 4933415A04RikQ9D443 101 aa8.8□□□□□ -1
Pcdha11-202ENSMUST00000115657 FlnaQ8BTM8 2647 aaKnown RBP8.79□□□□□ -1
Pcdha11-202ENSMUST00000115657 AtrQ9JKK8 2635 aa8.79□□□□□ -1
Pcdha11-202ENSMUST00000115657 Camk2n1Q6QWF9 78 aa8.77□□□□□ -1
Pcdha11-202ENSMUST00000115657 Chd7A2AJK6 2986 aaKnown RBP8.74□□□□□ -1.01
Pcdha11-202ENSMUST00000115657 Prune2Q52KR3 3084 aa8.74□□□□□ -1.01
Pcdha11-202ENSMUST00000115657 Cfap54Q8C6S9 3106 aa8.74□□□□□ -1.01
Pcdha11-202ENSMUST00000115657 Fam229aB2KGE5 128 aa8.74□□□□□ -1.01
Pcdha11-202ENSMUST00000115657 Kmt2bO08550 2713 aa8.73□□□□□ -1.01
Pcdha11-202ENSMUST00000115657 Gm7138L7N2C3 230 aa8.72□□□□□ -1.01
Pcdha11-202ENSMUST00000115657 Gm3238W4VSP7 230 aa8.72□□□□□ -1.01
Pcdha11-202ENSMUST00000115657 HrnrQ8VHD8 2496 aa8.71□□□□□ -1.02
Pcdha11-202ENSMUST00000115657 Krtap15-1Q9QZU5 150 aa8.71□□□□□ -1.02
Pcdha11-202ENSMUST00000115657 Mki67E9PVX6 3177 aaKnown RBP8.7□□□□□ -1.02
Pcdha11-202ENSMUST00000115657 Jbts17Q8CE72 3214 aa8.7□□□□□ -1.02
Pcdha11-202ENSMUST00000115657 1700042G07RikB1AUF7 90 aa8.69□□□□□ -1.02
Pcdha11-202ENSMUST00000115657 Krtap29-1A2A5X4 342 aa8.69□□□□□ -1.02
Pcdha11-202ENSMUST00000115657 Lama3Q61789 3330 aa8.67□□□□□ -1.02
Pcdha11-202ENSMUST00000115657 Rpl37Q9D823 97 aa8.67□□□□□ -1.02
Pcdha11-202ENSMUST00000115657 Gm2310J3QNJ2 377 aa8.64□□□□□ -1.03
Pcdha11-202ENSMUST00000115657 Hectd1Q69ZR2 2618 aaKnown RBP8.64□□□□□ -1.03
Pcdha11-202ENSMUST00000115657 Notch1Q01705 2531 aa8.64□□□□□ -1.03
Pcdha11-202ENSMUST00000115657 Sec61bQ9CQS8 96 aaKnown RBP8.64□□□□□ -1.03
Pcdha11-202ENSMUST00000115657 Romo1P60603 79 aa8.63□□□□□ -1.03
Pcdha11-202ENSMUST00000115657 Lama2Q60675 3118 aaKnown RBP8.61□□□□□ -1.03
Pcdha11-202ENSMUST00000115657 Bod1lE9Q6J5 3032 aa8.61□□□□□ -1.03
Pcdha11-202ENSMUST00000115657 HttP42859 3119 aa8.6□□□□□ -1.03
Pcdha11-202ENSMUST00000115657 Myo15bI7HPW8 3033 aa8.57□□□□□ -1.04
Pcdha11-202ENSMUST00000115657 Gm7137J3QMW1 236 aa8.57□□□□□ -1.04
Pcdha11-202ENSMUST00000115657 NipblQ6KCD5 2798 aaKnown RBP8.57□□□□□ -1.04
Pcdha11-202ENSMUST00000115657 Col12a1Q60847 3120 aa8.55□□□□□ -1.04
Pcdha11-202ENSMUST00000115657 BC029722A0A0N4SW31 51 aa8.54□□□□□ -1.04
Pcdha11-202ENSMUST00000115657 Ranbp2Q9ERU9 3053 aaKnown RBP8.54□□□□□ -1.04
Pcdha11-202ENSMUST00000115657 Gm5767A0A0J9YTU8 78 aa8.53□□□□□ -1.04
Pcdha11-202ENSMUST00000115657 Usp34Q6ZQ93 3582 aa8.52□□□□□ -1.05
Pcdha11-202ENSMUST00000115657 Gm17349F7BGH6 99 aa8.51□□□□□ -1.05
Pcdha11-202ENSMUST00000115657 Akap13E9Q394 2776 aa8.48□□□□□ -1.05
Pcdha11-202ENSMUST00000115657 Gm10382Q3V0T5 144 aa8.48□□□□□ -1.05
Pcdha11-202ENSMUST00000115657 Gm9508A0A1W2P7W0 230 aa8.47□□□□□ -1.05
Pcdha11-202ENSMUST00000115657 Itpr1P11881 2749 aa8.46□□□□□ -1.05
Pcdha11-202ENSMUST00000115657 Gm19426M0QWC7 77 aa8.45□□□□□ -1.06
Pcdha11-202ENSMUST00000115657 Dmxl1Q6PNC0 3013 aa8.44□□□□□ -1.06
Pcdha11-202ENSMUST00000115657 Stab1Q8R4Y4 2571 aa8.44□□□□□ -1.06
Pcdha11-202ENSMUST00000115657 Rps29P62274 56 aa8.44□□□□□ -1.06
Pcdha11-202ENSMUST00000115657 Ash1lQ99MY8 2958 aa8.42□□□□□ -1.06
Pcdha11-202ENSMUST00000115657 Rev3lQ61493 3122 aa8.39□□□□□ -1.07
Pcdha11-202ENSMUST00000115657 Mast4Q811L6 2618 aa8.39□□□□□ -1.07
Pcdha11-202ENSMUST00000115657 2310061N02RikQ9D6S9 174 aa8.38□□□□□ -1.07
Pcdha11-202ENSMUST00000115657 Cox6b2Q80ZN9 88 aa8.38□□□□□ -1.07
Pcdha11-202ENSMUST00000115657 2310050C09RikG5E8Z3 280 aa8.37□□□□□ -1.07
Pcdha11-202ENSMUST00000115657 Gm36176A0A1W2P8D5 158 aa8.37□□□□□ -1.07
Pcdha11-202ENSMUST00000115657 Gm7173A0A0G2JEB6 3132 aa8.37□□□□□ -1.07
Pcdha11-202ENSMUST00000115657 Fbn2Q61555 2907 aa8.36□□□□□ -1.07
Pcdha11-202ENSMUST00000115657 Cdh23Q99PF4 3354 aa8.33□□□□□ -1.08
Pcdha11-202ENSMUST00000115657 Tnp2P11378 117 aa8.33□□□□□ -1.08
Pcdha11-202ENSMUST00000115657 Chd6A3KFM7 2711 aa8.31□□□□□ -1.08
Pcdha11-202ENSMUST00000115657 Vps13aQ5H8C4 3166 aa8.3□□□□□ -1.08
Pcdha11-202ENSMUST00000115657 Krtap14O08640 167 aa8.29□□□□□ -1.08
Pcdha11-202ENSMUST00000115657 Itpr3P70227 2670 aa8.27□□□□□ -1.09
Pcdha11-202ENSMUST00000115657 Krtap13O88375 197 aa8.23□□□□□ -1.09
Pcdha11-202ENSMUST00000115657 MgaA2AWL7 3003 aaKnown RBP8.22□□□□□ -1.09
Pcdha11-202ENSMUST00000115657 9530053A07RikE9PVG8 2581 aa8.19□□□□□ -1.1
Pcdha11-202ENSMUST00000115657 Tep1P97499 2629 aa8.19□□□□□ -1.1
Pcdha11-202ENSMUST00000115657 Igsf10Q3V1M1 2594 aa8.18□□□□□ -1.1
Pcdha11-202ENSMUST00000115657 Unc80Q8BLN6 3261 aa8.18□□□□□ -1.1
Pcdha11-202ENSMUST00000115657 KalrnA2CG49 2964 aa8.17□□□□□ -1.1
Pcdha11-202ENSMUST00000115657 D6Ertd527eA0A0N4SWI3 464 aa8.16□□□□□ -1.1
Pcdha11-202ENSMUST00000115657 Szt2A2A9C3 3431 aa8.15□□□□□ -1.1
Pcdha11-202ENSMUST00000115657 Stab2Q8R4U0 2559 aa8.13□□□□□ -1.11
Pcdha11-202ENSMUST00000115657 Celsr1O35161 3034 aa8.13□□□□□ -1.11
Pcdha11-202ENSMUST00000115657 Frem2Q6NVD0 3160 aa8.12□□□□□ -1.11
Pcdha11-202ENSMUST00000115657 FryE9Q8I9 3020 aa8.09□□□□□ -1.11
Pcdha11-202ENSMUST00000115657 Celsr3Q91ZI0 3301 aa8.08□□□□□ -1.12
Pcdha11-202ENSMUST00000115657 Ubr5Q80TP3 2792 aa8.05□□□□□ -1.12
Pcdha11-202ENSMUST00000115657 AtmQ62388 3066 aa8.01□□□□□ -1.13
Pcdha11-202ENSMUST00000115657 Lrrc37aB1AWG4 3215 aa8□□□□□ -1.13
Pcdha11-202ENSMUST00000115657 FrylF8VQ05 3007 aa8□□□□□ -1.13
Pcdha11-202ENSMUST00000115657 Gm9507D3Z5T3 223 aa7.99□□□□□ -1.13
Pcdha11-202ENSMUST00000115657 AspmQ8CJ27 3122 aa7.98□□□□□ -1.13
Pcdha11-202ENSMUST00000115657 Pkd1l1Q8R526 2615 aa7.98□□□□□ -1.13
Pcdha11-202ENSMUST00000115657 Ndufaf8A2AMZ4 74 aa7.97□□□□□ -1.13
Pcdha11-202ENSMUST00000115657 Lama1P19137 3084 aa7.97□□□□□ -1.13
Pcdha11-202ENSMUST00000115657 Muc2Q80Z19 2680 aa7.97□□□□□ -1.13
Pcdha11-202ENSMUST00000115657 Gm21887J3QQ04 176 aa7.96□□□□□ -1.13
Pcdha11-202ENSMUST00000115657 DspE9Q557 2883 aaKnown RBP7.94□□□□□ -1.14
Pcdha11-202ENSMUST00000115657 BptfA2A654 3036 aaKnown RBP7.93□□□□□ -1.14
Pcdha11-202ENSMUST00000115657 Zzef1Q5SSH7 2924 aa7.93□□□□□ -1.14
Pcdha11-202ENSMUST00000115657 Gm40193A0A1B0GT39 78 aa7.91□□□□□ -1.14
Pcdha11-202ENSMUST00000115657 TgO08710 2766 aa7.91□□□□□ -1.14
Pcdha11-202ENSMUST00000115657 Adgrg4B7ZCC9 3073 aa7.91□□□□□ -1.14
Pcdha11-202ENSMUST00000115657 Wdfy4E9Q2M9 3149 aa7.9□□□□□ -1.14
Pcdha11-202ENSMUST00000115657 Nbeal2Q6ZQA0 2742 aa7.89□□□□□ -1.15
Pcdha11-202ENSMUST00000115657 Gm9112A2AI92 75 aa7.88□□□□□ -1.15
Pcdha11-202ENSMUST00000115657 Tnp1P10856 55 aa7.87□□□□□ -1.15
Pcdha11-202ENSMUST00000115657 Krtap10-4Q08EG8 221 aa7.87□□□□□ -1.15
Pcdha11-202ENSMUST00000115657 Utp20Q5XG71 2788 aaKnown RBP7.87□□□□□ -1.15
Pcdha11-202ENSMUST00000115657 FcgbpE9Q0B5 2583 aa7.84□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 55.1 ms