RNA–Protein interactions for RNA: ENSMUST00000111566.8

Clip1-205, Transcript of CAP-Gly domain-containing linker protein 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Clip1, Length 6,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1-205ENSMUST00000111566 Gm10065F6TJM2 114 aa12.22□□□□□ -0.45
Clip1-205ENSMUST00000111566 OxtP35454 125 aa12.21□□□□□ -0.45
Clip1-205ENSMUST00000111566 Odf3bQ5M8M2 238 aa12.21□□□□□ -0.46
Clip1-205ENSMUST00000111566 Notch1Q01705 2531 aa12.2□□□□□ -0.46
Clip1-205ENSMUST00000111566 Nsd1O88491 2588 aaKnown RBP12.2□□□□□ -0.46
Clip1-205ENSMUST00000111566 Fn1P11276 2477 aaKnown RBP12.19□□□□□ -0.46
Clip1-205ENSMUST00000111566 A730071L15RikQ8C4X0 137 aa12.19□□□□□ -0.46
Clip1-205ENSMUST00000111566 Gm7137J3QMW1 236 aa12.18□□□□□ -0.46
Clip1-205ENSMUST00000111566 Myo15bI7HPW8 3033 aa12.18□□□□□ -0.46
Clip1-205ENSMUST00000111566 Gm9508A0A1W2P7W0 230 aa12.18□□□□□ -0.46
Clip1-205ENSMUST00000111566 Stab1Q8R4Y4 2571 aa12.09□□□□□ -0.47
Clip1-205ENSMUST00000111566 Krtap15-1Q9QZU5 150 aa12.08□□□□□ -0.48
Clip1-205ENSMUST00000111566 Prrc2cQ3TLH4 2846 aaKnown RBP12.08□□□□□ -0.48
Clip1-205ENSMUST00000111566 Sprr1aQ62266 144 aa12.07□□□□□ -0.48
Clip1-205ENSMUST00000111566 4933415A04RikQ9D443 101 aa12.06□□□□□ -0.48
Clip1-205ENSMUST00000111566 1700042G07RikB1AUF7 90 aa12.05□□□□□ -0.48
Clip1-205ENSMUST00000111566 Camk2n1Q6QWF9 78 aa12.05□□□□□ -0.48
Clip1-205ENSMUST00000111566 Chd7A2AJK6 2986 aaKnown RBP12.04□□□□□ -0.48
Clip1-205ENSMUST00000111566 Romo1P60603 79 aa12.03□□□□□ -0.48
Clip1-205ENSMUST00000111566 Map1aQ9QYR6 2776 aa12.02□□□□□ -0.48
Clip1-205ENSMUST00000111566 NipblQ6KCD5 2798 aaKnown RBP12.02□□□□□ -0.49
Clip1-205ENSMUST00000111566 Gm16253D3Z167 63 aa11.98□□□□□ -0.49
Clip1-205ENSMUST00000111566 Gm7173A0A0G2JEB6 3132 aa11.98□□□□□ -0.49
Clip1-205ENSMUST00000111566 Jbts17Q8CE72 3214 aa11.97□□□□□ -0.49
Clip1-205ENSMUST00000111566 Akap13E9Q394 2776 aa11.97□□□□□ -0.49
Clip1-205ENSMUST00000111566 Rpl37Q9D823 97 aa11.94□□□□□ -0.5
Clip1-205ENSMUST00000111566 Lama3Q61789 3330 aa11.93□□□□□ -0.5
Clip1-205ENSMUST00000111566 Mast4Q811L6 2618 aa11.92□□□□□ -0.5
Clip1-205ENSMUST00000111566 Mki67E9PVX6 3177 aaKnown RBP11.88□□□□□ -0.51
Clip1-205ENSMUST00000111566 Col12a1Q60847 3120 aa11.88□□□□□ -0.51
Clip1-205ENSMUST00000111566 Kmt2bO08550 2713 aa11.88□□□□□ -0.51
Clip1-205ENSMUST00000111566 HttP42859 3119 aa11.85□□□□□ -0.51
Clip1-205ENSMUST00000111566 Gm10382Q3V0T5 144 aa11.85□□□□□ -0.51
Clip1-205ENSMUST00000111566 Fbn2Q61555 2907 aa11.84□□□□□ -0.51
Clip1-205ENSMUST00000111566 SmcpP15265 143 aa11.83□□□□□ -0.52
Clip1-205ENSMUST00000111566 Itpr3P70227 2670 aa11.82□□□□□ -0.52
Clip1-205ENSMUST00000111566 MgaA2AWL7 3003 aaKnown RBP11.81□□□□□ -0.52
Clip1-205ENSMUST00000111566 Dmxl1Q6PNC0 3013 aa11.8□□□□□ -0.52
Clip1-205ENSMUST00000111566 HrnrQ8VHD8 2496 aa11.79□□□□□ -0.52
Clip1-205ENSMUST00000111566 Chd6A3KFM7 2711 aa11.79□□□□□ -0.52
Clip1-205ENSMUST00000111566 Igsf10Q3V1M1 2594 aa11.77□□□□□ -0.53
Clip1-205ENSMUST00000111566 Rev3lQ61493 3122 aa11.73□□□□□ -0.53
Clip1-205ENSMUST00000111566 Ubr5Q80TP3 2792 aa11.73□□□□□ -0.53
Clip1-205ENSMUST00000111566 Gm17349F7BGH6 99 aa11.72□□□□□ -0.53
Clip1-205ENSMUST00000111566 KalrnA2CG49 2964 aa11.71□□□□□ -0.53
Clip1-205ENSMUST00000111566 Ash1lQ99MY8 2958 aa11.71□□□□□ -0.53
Clip1-205ENSMUST00000111566 Fam229aB2KGE5 128 aa11.71□□□□□ -0.54
Clip1-205ENSMUST00000111566 Krtap29-1A2A5X4 342 aa11.69□□□□□ -0.54
Clip1-205ENSMUST00000111566 Gm36176A0A1W2P8D5 158 aa11.68□□□□□ -0.54
Clip1-205ENSMUST00000111566 Bod1lE9Q6J5 3032 aa11.67□□□□□ -0.54
Clip1-205ENSMUST00000111566 2310050C09RikG5E8Z3 280 aa11.64□□□□□ -0.55
Clip1-205ENSMUST00000111566 Gm19426M0QWC7 77 aa11.61□□□□□ -0.55
Clip1-205ENSMUST00000111566 Gm5767A0A0J9YTU8 78 aa11.61□□□□□ -0.55
Clip1-205ENSMUST00000111566 Krtap13O88375 197 aa11.59□□□□□ -0.55
Clip1-205ENSMUST00000111566 Muc2Q80Z19 2680 aa11.59□□□□□ -0.55
Clip1-205ENSMUST00000111566 Gm2310J3QNJ2 377 aa11.59□□□□□ -0.55
Clip1-205ENSMUST00000111566 BC029722A0A0N4SW31 51 aa11.58□□□□□ -0.56
Clip1-205ENSMUST00000111566 Usp34Q6ZQ93 3582 aa11.57□□□□□ -0.56
Clip1-205ENSMUST00000111566 Tep1P97499 2629 aa11.54□□□□□ -0.56
Clip1-205ENSMUST00000111566 9530053A07RikE9PVG8 2581 aa11.52□□□□□ -0.57
Clip1-205ENSMUST00000111566 Col6a5A6H584 2640 aa11.5□□□□□ -0.57
Clip1-205ENSMUST00000111566 Sec61bQ9CQS8 96 aaKnown RBP11.49□□□□□ -0.57
Clip1-205ENSMUST00000111566 Stab2Q8R4U0 2559 aa11.49□□□□□ -0.57
Clip1-205ENSMUST00000111566 Pkd1l1Q8R526 2615 aa11.46□□□□□ -0.58
Clip1-205ENSMUST00000111566 Nbeal2Q6ZQA0 2742 aa11.45□□□□□ -0.58
Clip1-205ENSMUST00000111566 Ndufaf8A2AMZ4 74 aa11.42□□□□□ -0.58
Clip1-205ENSMUST00000111566 Cox6b2Q80ZN9 88 aa11.39□□□□□ -0.59
Clip1-205ENSMUST00000111566 Cfap54Q8C6S9 3106 aa11.37□□□□□ -0.59
Clip1-205ENSMUST00000111566 Hivep1Q03172 2688 aa11.36□□□□□ -0.59
Clip1-205ENSMUST00000111566 Gm9507D3Z5T3 223 aa11.36□□□□□ -0.59
Clip1-205ENSMUST00000111566 Krtap14O08640 167 aa11.34□□□□□ -0.59
Clip1-205ENSMUST00000111566 Ranbp2Q9ERU9 3053 aaKnown RBP11.34□□□□□ -0.59
Clip1-205ENSMUST00000111566 Cdh23Q99PF4 3354 aa11.29□□□□□ -0.6
Clip1-205ENSMUST00000111566 AspmQ8CJ27 3122 aa11.24□□□□□ -0.61
Clip1-205ENSMUST00000111566 AtmQ62388 3066 aa11.23□□□□□ -0.61
Clip1-205ENSMUST00000111566 Krtap10-4Q08EG8 221 aa11.23□□□□□ -0.61
Clip1-205ENSMUST00000111566 Itpr2Q9Z329 2701 aa11.18□□□□□ -0.62
Clip1-205ENSMUST00000111566 D6Ertd527eA0A0N4SWI3 464 aa11.16□□□□□ -0.62
Clip1-205ENSMUST00000111566 Celsr1O35161 3034 aa11.16□□□□□ -0.62
Clip1-205ENSMUST00000111566 Tex15F8VPN2 2785 aa11.14□□□□□ -0.63
Clip1-205ENSMUST00000111566 Vps13aQ5H8C4 3166 aa11.13□□□□□ -0.63
Clip1-205ENSMUST00000111566 2310061N02RikQ9D6S9 174 aa11.1□□□□□ -0.63
Clip1-205ENSMUST00000111566 Lrrc37aB1AWG4 3215 aa11.09□□□□□ -0.63
Clip1-205ENSMUST00000111566 Krtap10-10A0A1W2P7T6 217 aa11.08□□□□□ -0.64
Clip1-205ENSMUST00000111566 Utp20Q5XG71 2788 aaKnown RBP11.08□□□□□ -0.64
Clip1-205ENSMUST00000111566 Rps29P62274 56 aa11.07□□□□□ -0.64
Clip1-205ENSMUST00000111566 Szt2A2A9C3 3431 aa11.05□□□□□ -0.64
Clip1-205ENSMUST00000111566 Gm9112A2AI92 75 aa11.04□□□□□ -0.64
Clip1-205ENSMUST00000111566 Tnp2P11378 117 aa11.02□□□□□ -0.64
Clip1-205ENSMUST00000111566 Gm21887J3QQ04 176 aa11.02□□□□□ -0.64
Clip1-205ENSMUST00000111566 NbeaQ9EPN1 2936 aa11.01□□□□□ -0.65
Clip1-205ENSMUST00000111566 FcgbpE9Q0B5 2583 aa11□□□□□ -0.65
Clip1-205ENSMUST00000111566 FryE9Q8I9 3020 aa10.95□□□□□ -0.66
Clip1-205ENSMUST00000111566 Igfn1Q3KNY0 2849 aa10.95□□□□□ -0.66
Clip1-205ENSMUST00000111566 Wdfy4E9Q2M9 3149 aa10.92□□□□□ -0.66
Clip1-205ENSMUST00000111566 FlncQ8VHX6 2726 aaKnown RBP10.91□□□□□ -0.66
Clip1-205ENSMUST00000111566 FrylF8VQ05 3007 aa10.91□□□□□ -0.66
Clip1-205ENSMUST00000111566 Dmxl2Q8BPN8 3032 aa10.91□□□□□ -0.66
Clip1-205ENSMUST00000111566 Adgrg4B7ZCC9 3073 aa10.88□□□□□ -0.67
Clip1-205ENSMUST00000111566 BptfA2A654 3036 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 7.5 ms