RNA–Protein interactions for RNA: ENSMUST00000107935.7

Shank1-202, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,649 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-202ENSMUST00000107935 Bahcc1Q3UHR0 2643 aa8.78□□□□□ -1
Shank1-202ENSMUST00000107935 Usp9yF8VPU6 2556 aa8.76□□□□□ -1.01
Shank1-202ENSMUST00000107935 Gm5767A0A0J9YTU8 78 aa8.76□□□□□ -1.01
Shank1-202ENSMUST00000107935 Setd2E9Q5F9 2537 aa8.72□□□□□ -1.01
Shank1-202ENSMUST00000107935 Gm11565A2A4M7 156 aa8.69□□□□□ -1.02
Shank1-202ENSMUST00000107935 Ankrd17Q99NH0 2603 aaKnown RBP8.68□□□□□ -1.02
Shank1-202ENSMUST00000107935 Dnah12Q3V0Q1 3086 aa8.68□□□□□ -1.02
Shank1-202ENSMUST00000107935 Gm36176A0A1W2P8D5 158 aa8.67□□□□□ -1.02
Shank1-202ENSMUST00000107935 Gm17349F7BGH6 99 aa8.67□□□□□ -1.02
Shank1-202ENSMUST00000107935 PolqQ8CGS6 2544 aa8.66□□□□□ -1.02
Shank1-202ENSMUST00000107935 Sec61bQ9CQS8 96 aaKnown RBP8.65□□□□□ -1.03
Shank1-202ENSMUST00000107935 Lama2Q60675 3118 aaKnown RBP8.62□□□□□ -1.03
Shank1-202ENSMUST00000107935 Unc79Q0KK59 2596 aa8.6□□□□□ -1.03
Shank1-202ENSMUST00000107935 TrioQ0KL02 3102 aa8.6□□□□□ -1.03
Shank1-202ENSMUST00000107935 Cep350E9Q309 3095 aa8.57□□□□□ -1.04
Shank1-202ENSMUST00000107935 Krtap13O88375 197 aa8.57□□□□□ -1.04
Shank1-202ENSMUST00000107935 Abca12E9Q876 2595 aa8.56□□□□□ -1.04
Shank1-202ENSMUST00000107935 Usp24B1AY13 2617 aaKnown RBP8.55□□□□□ -1.04
Shank1-202ENSMUST00000107935 Nbeal1E9PYP2 2688 aa8.55□□□□□ -1.04
Shank1-202ENSMUST00000107935 D6Ertd527eA0A0N4SWI3 464 aa8.54□□□□□ -1.04
Shank1-202ENSMUST00000107935 FlnbQ80X90 2602 aaKnown RBP8.53□□□□□ -1.04
Shank1-202ENSMUST00000107935 Gm40193A0A1B0GT39 78 aa8.51□□□□□ -1.05
Shank1-202ENSMUST00000107935 Gm21887J3QQ04 176 aa8.48□□□□□ -1.05
Shank1-202ENSMUST00000107935 AtrQ9JKK8 2635 aa8.48□□□□□ -1.05
Shank1-202ENSMUST00000107935 Nsd1O88491 2588 aaKnown RBP8.46□□□□□ -1.06
Shank1-202ENSMUST00000107935 PcntP48725 2898 aa8.45□□□□□ -1.06
Shank1-202ENSMUST00000107935 Ankrd11E9Q4F7 2643 aa8.45□□□□□ -1.06
Shank1-202ENSMUST00000107935 CenpfE9Q3P4 2997 aaKnown RBP8.45□□□□□ -1.06
Shank1-202ENSMUST00000107935 Rps29P62274 56 aa8.43□□□□□ -1.06
Shank1-202ENSMUST00000107935 Prune2Q52KR3 3084 aa8.43□□□□□ -1.06
Shank1-202ENSMUST00000107935 Zfp292Q9Z2U2 2698 aa8.43□□□□□ -1.06
Shank1-202ENSMUST00000107935 Bod1lE9Q6J5 3032 aa8.42□□□□□ -1.06
Shank1-202ENSMUST00000107935 Gm9507D3Z5T3 223 aa8.4□□□□□ -1.06
Shank1-202ENSMUST00000107935 Prm2P07978 107 aa8.4□□□□□ -1.07
Shank1-202ENSMUST00000107935 Cdh23Q99PF4 3354 aa8.39□□□□□ -1.07
Shank1-202ENSMUST00000107935 FasnP19096 2504 aaKnown RBP8.38□□□□□ -1.07
Shank1-202ENSMUST00000107935 Tnp1P10856 55 aa8.36□□□□□ -1.07
Shank1-202ENSMUST00000107935 Col12a1Q60847 3120 aa8.35□□□□□ -1.07
Shank1-202ENSMUST00000107935 HrnrQ8VHD8 2496 aa8.32□□□□□ -1.08
Shank1-202ENSMUST00000107935 Gm7173A0A0G2JEB6 3132 aa8.32□□□□□ -1.08
Shank1-202ENSMUST00000107935 Krtap10-4Q08EG8 221 aa8.32□□□□□ -1.08
Shank1-202ENSMUST00000107935 Gm20537G3UYK7 97 aa8.3□□□□□ -1.08
Shank1-202ENSMUST00000107935 Mki67E9PVX6 3177 aaKnown RBP8.27□□□□□ -1.09
Shank1-202ENSMUST00000107935 Myo18bE9PV66 2605 aa8.27□□□□□ -1.09
Shank1-202ENSMUST00000107935 Tnp2P11378 117 aa8.27□□□□□ -1.09
Shank1-202ENSMUST00000107935 Gm5965D3Z724 196 aa8.26□□□□□ -1.09
Shank1-202ENSMUST00000107935 HttP42859 3119 aa8.25□□□□□ -1.09
Shank1-202ENSMUST00000107935 Rev3lQ61493 3122 aa8.23□□□□□ -1.09
Shank1-202ENSMUST00000107935 Akap13E9Q394 2776 aa8.23□□□□□ -1.09
Shank1-202ENSMUST00000107935 Krtap10-10A0A1W2P7T6 217 aa8.2□□□□□ -1.1
Shank1-202ENSMUST00000107935 Gm9195A0A140LHT4 2805 aa8.2□□□□□ -1.1
Shank1-202ENSMUST00000107935 2310061N02RikQ9D6S9 174 aa8.18□□□□□ -1.1
Shank1-202ENSMUST00000107935 Szt2A2A9C3 3431 aa8.17□□□□□ -1.1
Shank1-202ENSMUST00000107935 Zfhx3Q61329 3726 aa8.16□□□□□ -1.1
Shank1-202ENSMUST00000107935 FlnaQ8BTM8 2647 aaKnown RBP8.16□□□□□ -1.1
Shank1-202ENSMUST00000107935 Fn1P11276 2477 aaKnown RBP8.16□□□□□ -1.1
Shank1-202ENSMUST00000107935 Hectd1Q69ZR2 2618 aaKnown RBP8.14□□□□□ -1.11
Shank1-202ENSMUST00000107935 Ranbp2Q9ERU9 3053 aaKnown RBP8.12□□□□□ -1.11
Shank1-202ENSMUST00000107935 2310057N15RikQ9D6T8 200 aa8.12□□□□□ -1.11
Shank1-202ENSMUST00000107935 Unc80Q8BLN6 3261 aa8.09□□□□□ -1.11
Shank1-202ENSMUST00000107935 Itpr3P70227 2670 aa8.04□□□□□ -1.12
Shank1-202ENSMUST00000107935 B930094E09RikQ8C4T2 136 aa8.04□□□□□ -1.12
Shank1-202ENSMUST00000107935 Vps13aQ5H8C4 3166 aa8.02□□□□□ -1.12
Shank1-202ENSMUST00000107935 Celsr3Q91ZI0 3301 aa8.02□□□□□ -1.13
Shank1-202ENSMUST00000107935 Stab1Q8R4Y4 2571 aa8□□□□□ -1.13
Shank1-202ENSMUST00000107935 Igsf10Q3V1M1 2594 aa7.99□□□□□ -1.13
Shank1-202ENSMUST00000107935 Gcn1E9PVA8 2671 aaKnown RBP7.98□□□□□ -1.13
Shank1-202ENSMUST00000107935 Prrc2cQ3TLH4 2846 aaKnown RBP7.98□□□□□ -1.13
Shank1-202ENSMUST00000107935 AtmQ62388 3066 aa7.96□□□□□ -1.14
Shank1-202ENSMUST00000107935 Gm2696A0A1W2P709 240 aa7.94□□□□□ -1.14
Shank1-202ENSMUST00000107935 BptfA2A654 3036 aaKnown RBP7.93□□□□□ -1.14
Shank1-202ENSMUST00000107935 Frem2Q6NVD0 3160 aa7.92□□□□□ -1.14
Shank1-202ENSMUST00000107935 Ash1lQ99MY8 2958 aa7.91□□□□□ -1.14
Shank1-202ENSMUST00000107935 MgaA2AWL7 3003 aaKnown RBP7.91□□□□□ -1.14
Shank1-202ENSMUST00000107935 A930033H14RikG5E8X6 103 aa7.89□□□□□ -1.15
Shank1-202ENSMUST00000107935 Col6a3E9PWQ3 3284 aa7.88□□□□□ -1.15
Shank1-202ENSMUST00000107935 2310079G19RikQ9D6L6 185 aa7.88□□□□□ -1.15
Shank1-202ENSMUST00000107935 Chd7A2AJK6 2986 aaKnown RBP7.87□□□□□ -1.15
Shank1-202ENSMUST00000107935 Myo15bI7HPW8 3033 aa7.85□□□□□ -1.15
Shank1-202ENSMUST00000107935 Notch1Q01705 2531 aa7.83□□□□□ -1.16
Shank1-202ENSMUST00000107935 Mast4Q811L6 2618 aa7.82□□□□□ -1.16
Shank1-202ENSMUST00000107935 Cfap54Q8C6S9 3106 aa7.82□□□□□ -1.16
Shank1-202ENSMUST00000107935 Brca2P97929 3329 aa7.77□□□□□ -1.16
Shank1-202ENSMUST00000107935 NipblQ6KCD5 2798 aaKnown RBP7.77□□□□□ -1.17
Shank1-202ENSMUST00000107935 Dmxl1Q6PNC0 3013 aa7.76□□□□□ -1.17
Shank1-202ENSMUST00000107935 9530053A07RikE9PVG8 2581 aa7.75□□□□□ -1.17
Shank1-202ENSMUST00000107935 Nbeal2Q6ZQA0 2742 aa7.73□□□□□ -1.17
Shank1-202ENSMUST00000107935 Lrrc37aB1AWG4 3215 aa7.72□□□□□ -1.17
Shank1-202ENSMUST00000107935 Tnrc18Q80WC3 2878 aa7.71□□□□□ -1.18
Shank1-202ENSMUST00000107935 Map1aQ9QYR6 2776 aa7.7□□□□□ -1.18
Shank1-202ENSMUST00000107935 SpegQ62407 3262 aa7.67□□□□□ -1.18
Shank1-202ENSMUST00000107935 Ubr5Q80TP3 2792 aa7.67□□□□□ -1.18
Shank1-202ENSMUST00000107935 KalrnA2CG49 2964 aa7.66□□□□□ -1.18
Shank1-202ENSMUST00000107935 Tep1P97499 2629 aa7.66□□□□□ -1.18
Shank1-202ENSMUST00000107935 Dchs2A0A0A6YW72 3346 aa7.65□□□□□ -1.18
Shank1-202ENSMUST00000107935 VcanQ62059 3357 aa7.64□□□□□ -1.19
Shank1-202ENSMUST00000107935 Kmt2bO08550 2713 aa7.64□□□□□ -1.19
Shank1-202ENSMUST00000107935 AspmQ8CJ27 3122 aa7.64□□□□□ -1.19
Shank1-202ENSMUST00000107935 Wdfy3Q6VNB8 3508 aa7.63□□□□□ -1.19
Shank1-202ENSMUST00000107935 Itpr1P11881 2749 aa7.62□□□□□ -1.19
Retrieved 100 of 22,080 RNA–protein pairs in 65.7 ms