RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Sprr1aQ62266 144 aa9.88□□□□□ -0.83
Col17a1-202ENSMUST00000086923 Zfp292Q9Z2U2 2698 aa9.85□□□□□ -0.83
Col17a1-202ENSMUST00000086923 HttP42859 3119 aa9.84□□□□□ -0.83
Col17a1-202ENSMUST00000086923 Notch1Q01705 2531 aa9.84□□□□□ -0.83
Col17a1-202ENSMUST00000086923 Fam229aB2KGE5 128 aa9.83□□□□□ -0.84
Col17a1-202ENSMUST00000086923 Usp24B1AY13 2617 aaKnown RBP9.83□□□□□ -0.84
Col17a1-202ENSMUST00000086923 Gm7173A0A0G2JEB6 3132 aa9.83□□□□□ -0.84
Col17a1-202ENSMUST00000086923 Gm10065F6TJM2 114 aa9.82□□□□□ -0.84
Col17a1-202ENSMUST00000086923 Mki67E9PVX6 3177 aaKnown RBP9.82□□□□□ -0.84
Col17a1-202ENSMUST00000086923 CicQ924A2 2510 aa9.82□□□□□ -0.84
Col17a1-202ENSMUST00000086923 Prune2Q52KR3 3084 aa9.82□□□□□ -0.84
Col17a1-202ENSMUST00000086923 Gm2310J3QNJ2 377 aa9.81□□□□□ -0.84
Col17a1-202ENSMUST00000086923 Gm9112A2AI92 75 aa9.79□□□□□ -0.84
Col17a1-202ENSMUST00000086923 Spink7Q6IE32 76 aa9.78□□□□□ -0.84
Col17a1-202ENSMUST00000086923 Ankrd11E9Q4F7 2643 aa9.76□□□□□ -0.85
Col17a1-202ENSMUST00000086923 Gm11565A2A4M7 156 aa9.76□□□□□ -0.85
Col17a1-202ENSMUST00000086923 Krtap14O08640 167 aa9.74□□□□□ -0.85
Col17a1-202ENSMUST00000086923 Tnrc18Q80WC3 2878 aa9.73□□□□□ -0.85
Col17a1-202ENSMUST00000086923 Col12a1Q60847 3120 aa9.72□□□□□ -0.85
Col17a1-202ENSMUST00000086923 Gm3233E9Q2H5 230 aa9.71□□□□□ -0.86
Col17a1-202ENSMUST00000086923 Cox6b2Q80ZN9 88 aa9.69□□□□□ -0.86
Col17a1-202ENSMUST00000086923 Camk2n1Q6QWF9 78 aa9.67□□□□□ -0.86
Col17a1-202ENSMUST00000086923 Chd7A2AJK6 2986 aaKnown RBP9.67□□□□□ -0.86
Col17a1-202ENSMUST00000086923 Gm9508A0A1W2P7W0 230 aa9.66□□□□□ -0.86
Col17a1-202ENSMUST00000086923 Lelp1Q9DAE3 120 aa9.66□□□□□ -0.86
Col17a1-202ENSMUST00000086923 Jbts17Q8CE72 3214 aa9.65□□□□□ -0.87
Col17a1-202ENSMUST00000086923 Map1aQ9QYR6 2776 aa9.63□□□□□ -0.87
Col17a1-202ENSMUST00000086923 Sec61bQ9CQS8 96 aaKnown RBP9.62□□□□□ -0.87
Col17a1-202ENSMUST00000086923 Gm19426M0QWC7 77 aa9.6□□□□□ -0.87
Col17a1-202ENSMUST00000086923 Cdh23Q99PF4 3354 aa9.58□□□□□ -0.88
Col17a1-202ENSMUST00000086923 Rev3lQ61493 3122 aa9.57□□□□□ -0.88
Col17a1-202ENSMUST00000086923 Prm2P07978 107 aa9.57□□□□□ -0.88
Col17a1-202ENSMUST00000086923 Myo15bI7HPW8 3033 aa9.57□□□□□ -0.88
Col17a1-202ENSMUST00000086923 Gm7138L7N2C3 230 aa9.53□□□□□ -0.88
Col17a1-202ENSMUST00000086923 Gm3238W4VSP7 230 aa9.53□□□□□ -0.88
Col17a1-202ENSMUST00000086923 FlnaQ8BTM8 2647 aaKnown RBP9.53□□□□□ -0.88
Col17a1-202ENSMUST00000086923 Utp20Q5XG71 2788 aaKnown RBP9.52□□□□□ -0.89
Col17a1-202ENSMUST00000086923 NipblQ6KCD5 2798 aaKnown RBP9.5□□□□□ -0.89
Col17a1-202ENSMUST00000086923 Gm9195A0A140LHT4 2805 aa9.49□□□□□ -0.89
Col17a1-202ENSMUST00000086923 Cfap54Q8C6S9 3106 aa9.49□□□□□ -0.89
Col17a1-202ENSMUST00000086923 Krtap15-1Q9QZU5 150 aa9.47□□□□□ -0.89
Col17a1-202ENSMUST00000086923 Itpr1P11881 2749 aa9.46□□□□□ -0.89
Col17a1-202ENSMUST00000086923 Akap13E9Q394 2776 aa9.44□□□□□ -0.9
Col17a1-202ENSMUST00000086923 Frem2Q6NVD0 3160 aa9.43□□□□□ -0.9
Col17a1-202ENSMUST00000086923 Bod1lE9Q6J5 3032 aa9.43□□□□□ -0.9
Col17a1-202ENSMUST00000086923 FlnbQ80X90 2602 aaKnown RBP9.43□□□□□ -0.9
Col17a1-202ENSMUST00000086923 Hectd1Q69ZR2 2618 aaKnown RBP9.43□□□□□ -0.9
Col17a1-202ENSMUST00000086923 2310050C09RikG5E8Z3 280 aa9.42□□□□□ -0.9
Col17a1-202ENSMUST00000086923 Szt2A2A9C3 3431 aa9.41□□□□□ -0.9
Col17a1-202ENSMUST00000086923 AtrQ9JKK8 2635 aa9.38□□□□□ -0.91
Col17a1-202ENSMUST00000086923 BC029722A0A0N4SW31 51 aa9.38□□□□□ -0.91
Col17a1-202ENSMUST00000086923 D6Ertd527eA0A0N4SWI3 464 aa9.37□□□□□ -0.91
Col17a1-202ENSMUST00000086923 Vps13aQ5H8C4 3166 aa9.36□□□□□ -0.91
Col17a1-202ENSMUST00000086923 Ranbp2Q9ERU9 3053 aaKnown RBP9.36□□□□□ -0.91
Col17a1-202ENSMUST00000086923 Gm17349F7BGH6 99 aa9.34□□□□□ -0.91
Col17a1-202ENSMUST00000086923 Gm7137J3QMW1 236 aa9.33□□□□□ -0.92
Col17a1-202ENSMUST00000086923 AtmQ62388 3066 aa9.33□□□□□ -0.92
Col17a1-202ENSMUST00000086923 Ash1lQ99MY8 2958 aa9.33□□□□□ -0.92
Col17a1-202ENSMUST00000086923 Krtap29-1A2A5X4 342 aa9.32□□□□□ -0.92
Col17a1-202ENSMUST00000086923 Krtap13O88375 197 aa9.32□□□□□ -0.92
Col17a1-202ENSMUST00000086923 Gm21887J3QQ04 176 aa9.3□□□□□ -0.92
Col17a1-202ENSMUST00000086923 KalrnA2CG49 2964 aa9.29□□□□□ -0.92
Col17a1-202ENSMUST00000086923 Fbn2Q61555 2907 aa9.28□□□□□ -0.92
Col17a1-202ENSMUST00000086923 Dmxl1Q6PNC0 3013 aa9.28□□□□□ -0.92
Col17a1-202ENSMUST00000086923 Gm5767A0A0J9YTU8 78 aa9.25□□□□□ -0.93
Col17a1-202ENSMUST00000086923 Chd6A3KFM7 2711 aa9.24□□□□□ -0.93
Col17a1-202ENSMUST00000086923 Gm20537G3UYK7 97 aa9.22□□□□□ -0.93
Col17a1-202ENSMUST00000086923 Stab1Q8R4Y4 2571 aa9.22□□□□□ -0.93
Col17a1-202ENSMUST00000086923 MgaA2AWL7 3003 aaKnown RBP9.22□□□□□ -0.93
Col17a1-202ENSMUST00000086923 Unc80Q8BLN6 3261 aa9.22□□□□□ -0.93
Col17a1-202ENSMUST00000086923 9530053A07RikE9PVG8 2581 aa9.21□□□□□ -0.94
Col17a1-202ENSMUST00000086923 Gm40193A0A1B0GT39 78 aa9.18□□□□□ -0.94
Col17a1-202ENSMUST00000086923 Lrrc37aB1AWG4 3215 aa9.17□□□□□ -0.94
Col17a1-202ENSMUST00000086923 Gm5965D3Z724 196 aa9.15□□□□□ -0.94
Col17a1-202ENSMUST00000086923 DspE9Q557 2883 aaKnown RBP9.13□□□□□ -0.95
Col17a1-202ENSMUST00000086923 Itpr3P70227 2670 aa9.13□□□□□ -0.95
Col17a1-202ENSMUST00000086923 Ubr5Q80TP3 2792 aa9.13□□□□□ -0.95
Col17a1-202ENSMUST00000086923 Igsf10Q3V1M1 2594 aa9.12□□□□□ -0.95
Col17a1-202ENSMUST00000086923 AspmQ8CJ27 3122 aa9.12□□□□□ -0.95
Col17a1-202ENSMUST00000086923 Tep1P97499 2629 aa9.11□□□□□ -0.95
Col17a1-202ENSMUST00000086923 Stab2Q8R4U0 2559 aa9.06□□□□□ -0.96
Col17a1-202ENSMUST00000086923 Mast4Q811L6 2618 aa9.04□□□□□ -0.96
Col17a1-202ENSMUST00000086923 2310057N15RikQ9D6T8 200 aa9.04□□□□□ -0.96
Col17a1-202ENSMUST00000086923 Tex15F8VPN2 2785 aa9.03□□□□□ -0.96
Col17a1-202ENSMUST00000086923 TgO08710 2766 aa9.01□□□□□ -0.97
Col17a1-202ENSMUST00000086923 FrylF8VQ05 3007 aa9□□□□□ -0.97
Col17a1-202ENSMUST00000086923 Nbeal2Q6ZQA0 2742 aa8.98□□□□□ -0.97
Col17a1-202ENSMUST00000086923 Lama1P19137 3084 aa8.96□□□□□ -0.97
Col17a1-202ENSMUST00000086923 ApcQ61315 2845 aa8.93□□□□□ -0.98
Col17a1-202ENSMUST00000086923 Wdfy4E9Q2M9 3149 aa8.93□□□□□ -0.98
Col17a1-202ENSMUST00000086923 BptfA2A654 3036 aaKnown RBP8.93□□□□□ -0.98
Col17a1-202ENSMUST00000086923 Tnp2P11378 117 aa8.91□□□□□ -0.98
Col17a1-202ENSMUST00000086923 Rps29P62274 56 aa8.91□□□□□ -0.98
Col17a1-202ENSMUST00000086923 Col6a3E9PWQ3 3284 aa8.9□□□□□ -0.98
Col17a1-202ENSMUST00000086923 Brca2P97929 3329 aa8.9□□□□□ -0.99
Col17a1-202ENSMUST00000086923 Gm36176A0A1W2P8D5 158 aa8.89□□□□□ -0.99
Col17a1-202ENSMUST00000086923 2310061N02RikQ9D6S9 174 aa8.89□□□□□ -0.99
Col17a1-202ENSMUST00000086923 Muc2Q80Z19 2680 aa8.88□□□□□ -0.99
Col17a1-202ENSMUST00000086923 Col6a5A6H584 2640 aa8.87□□□□□ -0.99
Col17a1-202ENSMUST00000086923 Celsr3Q91ZI0 3301 aa8.86□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 48 ms