RNA–Protein interactions for RNA: ENSMUST00000056889.14

Chd4-201, Transcript of Chromodomain-helicase-DNA-binding protein 4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Chd4, Length 6,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4-201ENSMUST00000056889 Gm17349F7BGH6 99 aa8.67□□□□□ -1.02
Chd4-201ENSMUST00000056889 BC029722A0A0N4SW31 51 aa8.66□□□□□ -1.02
Chd4-201ENSMUST00000056889 Gm42715A0A087WP63 3095 aaKnown RBP8.65□□□□□ -1.02
Chd4-201ENSMUST00000056889 2310050C09RikG5E8Z3 280 aa8.65□□□□□ -1.02
Chd4-201ENSMUST00000056889 Usp9yF8VPU6 2556 aa8.65□□□□□ -1.03
Chd4-201ENSMUST00000056889 SmcpP15265 143 aa8.62□□□□□ -1.03
Chd4-201ENSMUST00000056889 Ep400Q8CHI8 3072 aaKnown RBP8.62□□□□□ -1.03
Chd4-201ENSMUST00000056889 Gm5767A0A0J9YTU8 78 aa8.6□□□□□ -1.03
Chd4-201ENSMUST00000056889 Lama3Q61789 3330 aa8.59□□□□□ -1.03
Chd4-201ENSMUST00000056889 Gm9507D3Z5T3 223 aa8.58□□□□□ -1.04
Chd4-201ENSMUST00000056889 Krtap29-1A2A5X4 342 aa8.57□□□□□ -1.04
Chd4-201ENSMUST00000056889 Sec61bQ9CQS8 96 aaKnown RBP8.56□□□□□ -1.04
Chd4-201ENSMUST00000056889 Usp24B1AY13 2617 aaKnown RBP8.55□□□□□ -1.04
Chd4-201ENSMUST00000056889 Krtap10-4Q08EG8 221 aa8.55□□□□□ -1.04
Chd4-201ENSMUST00000056889 Abca12E9Q876 2595 aa8.54□□□□□ -1.04
Chd4-201ENSMUST00000056889 Krtap14O08640 167 aa8.51□□□□□ -1.05
Chd4-201ENSMUST00000056889 Prune2Q52KR3 3084 aa8.5□□□□□ -1.05
Chd4-201ENSMUST00000056889 Gm2310J3QNJ2 377 aa8.49□□□□□ -1.05
Chd4-201ENSMUST00000056889 Zfp292Q9Z2U2 2698 aa8.49□□□□□ -1.05
Chd4-201ENSMUST00000056889 Cep350E9Q309 3095 aa8.48□□□□□ -1.05
Chd4-201ENSMUST00000056889 Prrc2cQ3TLH4 2846 aaKnown RBP8.47□□□□□ -1.05
Chd4-201ENSMUST00000056889 Gm9112A2AI92 75 aa8.46□□□□□ -1.05
Chd4-201ENSMUST00000056889 Krtap10-10A0A1W2P7T6 217 aa8.45□□□□□ -1.06
Chd4-201ENSMUST00000056889 Unc79Q0KK59 2596 aa8.44□□□□□ -1.06
Chd4-201ENSMUST00000056889 Cox6b2Q80ZN9 88 aa8.43□□□□□ -1.06
Chd4-201ENSMUST00000056889 TrioQ0KL02 3102 aa8.42□□□□□ -1.06
Chd4-201ENSMUST00000056889 Ankrd11E9Q4F7 2643 aa8.41□□□□□ -1.06
Chd4-201ENSMUST00000056889 Ranbp2Q9ERU9 3053 aaKnown RBP8.4□□□□□ -1.06
Chd4-201ENSMUST00000056889 Usp34Q6ZQ93 3582 aa8.4□□□□□ -1.06
Chd4-201ENSMUST00000056889 Gm9195A0A140LHT4 2805 aa8.4□□□□□ -1.07
Chd4-201ENSMUST00000056889 FasnP19096 2504 aaKnown RBP8.35□□□□□ -1.07
Chd4-201ENSMUST00000056889 Gcn1E9PVA8 2671 aaKnown RBP8.35□□□□□ -1.07
Chd4-201ENSMUST00000056889 Mki67E9PVX6 3177 aaKnown RBP8.35□□□□□ -1.07
Chd4-201ENSMUST00000056889 Gm21887J3QQ04 176 aa8.32□□□□□ -1.08
Chd4-201ENSMUST00000056889 Fn1P11276 2477 aaKnown RBP8.3□□□□□ -1.08
Chd4-201ENSMUST00000056889 Lama2Q60675 3118 aaKnown RBP8.28□□□□□ -1.08
Chd4-201ENSMUST00000056889 Myo18bE9PV66 2605 aa8.26□□□□□ -1.09
Chd4-201ENSMUST00000056889 FlnaQ8BTM8 2647 aaKnown RBP8.25□□□□□ -1.09
Chd4-201ENSMUST00000056889 D6Ertd527eA0A0N4SWI3 464 aa8.25□□□□□ -1.09
Chd4-201ENSMUST00000056889 PcntP48725 2898 aa8.24□□□□□ -1.09
Chd4-201ENSMUST00000056889 Gm11565A2A4M7 156 aa8.23□□□□□ -1.09
Chd4-201ENSMUST00000056889 AtrQ9JKK8 2635 aa8.22□□□□□ -1.09
Chd4-201ENSMUST00000056889 Kmt2bO08550 2713 aa8.18□□□□□ -1.1
Chd4-201ENSMUST00000056889 Zfhx3Q61329 3726 aa8.18□□□□□ -1.1
Chd4-201ENSMUST00000056889 Gm2696A0A1W2P709 240 aa8.13□□□□□ -1.11
Chd4-201ENSMUST00000056889 Col12a1Q60847 3120 aa8.13□□□□□ -1.11
Chd4-201ENSMUST00000056889 Tnp1P10856 55 aa8.12□□□□□ -1.11
Chd4-201ENSMUST00000056889 Map1aQ9QYR6 2776 aa8.11□□□□□ -1.11
Chd4-201ENSMUST00000056889 Dmxl1Q6PNC0 3013 aa8.11□□□□□ -1.11
Chd4-201ENSMUST00000056889 Frem2Q6NVD0 3160 aa8.1□□□□□ -1.11
Chd4-201ENSMUST00000056889 2310057N15RikQ9D6T8 200 aa8.1□□□□□ -1.11
Chd4-201ENSMUST00000056889 NipblQ6KCD5 2798 aaKnown RBP8.1□□□□□ -1.11
Chd4-201ENSMUST00000056889 Celsr3Q91ZI0 3301 aa8.07□□□□□ -1.12
Chd4-201ENSMUST00000056889 Notch1Q01705 2531 aa8.06□□□□□ -1.12
Chd4-201ENSMUST00000056889 2310061N02RikQ9D6S9 174 aa8.06□□□□□ -1.12
Chd4-201ENSMUST00000056889 Unc80Q8BLN6 3261 aa8.03□□□□□ -1.12
Chd4-201ENSMUST00000056889 Gm5965D3Z724 196 aa8.03□□□□□ -1.12
Chd4-201ENSMUST00000056889 Prm2P07978 107 aa8.02□□□□□ -1.12
Chd4-201ENSMUST00000056889 Rps29P62274 56 aa8.02□□□□□ -1.13
Chd4-201ENSMUST00000056889 Cfap54Q8C6S9 3106 aa8.01□□□□□ -1.13
Chd4-201ENSMUST00000056889 Gm20537G3UYK7 97 aa8.01□□□□□ -1.13
Chd4-201ENSMUST00000056889 Tnp2P11378 117 aa8.01□□□□□ -1.13
Chd4-201ENSMUST00000056889 BptfA2A654 3036 aaKnown RBP8.01□□□□□ -1.13
Chd4-201ENSMUST00000056889 Ash1lQ99MY8 2958 aa8□□□□□ -1.13
Chd4-201ENSMUST00000056889 HttP42859 3119 aa8□□□□□ -1.13
Chd4-201ENSMUST00000056889 FlnbQ80X90 2602 aaKnown RBP7.99□□□□□ -1.13
Chd4-201ENSMUST00000056889 Akap13E9Q394 2776 aa7.97□□□□□ -1.13
Chd4-201ENSMUST00000056889 Gm40193A0A1B0GT39 78 aa7.95□□□□□ -1.14
Chd4-201ENSMUST00000056889 Cdh23Q99PF4 3354 aa7.95□□□□□ -1.14
Chd4-201ENSMUST00000056889 Stab1Q8R4Y4 2571 aa7.9□□□□□ -1.15
Chd4-201ENSMUST00000056889 Chd6A3KFM7 2711 aa7.88□□□□□ -1.15
Chd4-201ENSMUST00000056889 Rev3lQ61493 3122 aa7.88□□□□□ -1.15
Chd4-201ENSMUST00000056889 Hectd1Q69ZR2 2618 aaKnown RBP7.86□□□□□ -1.15
Chd4-201ENSMUST00000056889 Gm7173A0A0G2JEB6 3132 aa7.86□□□□□ -1.15
Chd4-201ENSMUST00000056889 Vps13aQ5H8C4 3166 aa7.8□□□□□ -1.16
Chd4-201ENSMUST00000056889 AtmQ62388 3066 aa7.79□□□□□ -1.16
Chd4-201ENSMUST00000056889 B930094E09RikQ8C4T2 136 aa7.78□□□□□ -1.16
Chd4-201ENSMUST00000056889 Szt2A2A9C3 3431 aa7.78□□□□□ -1.16
Chd4-201ENSMUST00000056889 Tep1P97499 2629 aa7.77□□□□□ -1.17
Chd4-201ENSMUST00000056889 MgaA2AWL7 3003 aaKnown RBP7.75□□□□□ -1.17
Chd4-201ENSMUST00000056889 Chd7A2AJK6 2986 aaKnown RBP7.74□□□□□ -1.17
Chd4-201ENSMUST00000056889 DspE9Q557 2883 aaKnown RBP7.74□□□□□ -1.17
Chd4-201ENSMUST00000056889 Gm9918Q8BUR5 174 aa7.73□□□□□ -1.17
Chd4-201ENSMUST00000056889 Itpr3P70227 2670 aa7.72□□□□□ -1.17
Chd4-201ENSMUST00000056889 Celsr1O35161 3034 aa7.72□□□□□ -1.17
Chd4-201ENSMUST00000056889 KalrnA2CG49 2964 aa7.7□□□□□ -1.18
Chd4-201ENSMUST00000056889 9530053A07RikE9PVG8 2581 aa7.69□□□□□ -1.18
Chd4-201ENSMUST00000056889 ApcQ61315 2845 aa7.69□□□□□ -1.18
Chd4-201ENSMUST00000056889 Nbeal2Q6ZQA0 2742 aa7.66□□□□□ -1.18
Chd4-201ENSMUST00000056889 Brca2P97929 3329 aa7.65□□□□□ -1.18
Chd4-201ENSMUST00000056889 Ubr5Q80TP3 2792 aa7.64□□□□□ -1.19
Chd4-201ENSMUST00000056889 Fbn2Q61555 2907 aa7.62□□□□□ -1.19
Chd4-201ENSMUST00000056889 Igsf10Q3V1M1 2594 aa7.59□□□□□ -1.19
Chd4-201ENSMUST00000056889 Mast4Q811L6 2618 aa7.59□□□□□ -1.19
Chd4-201ENSMUST00000056889 Dchs2A0A0A6YW72 3346 aa7.59□□□□□ -1.19
Chd4-201ENSMUST00000056889 FryE9Q8I9 3020 aa7.56□□□□□ -1.2
Chd4-201ENSMUST00000056889 Dmxl2Q8BPN8 3032 aa7.55□□□□□ -1.2
Chd4-201ENSMUST00000056889 Col6a3E9PWQ3 3284 aa7.55□□□□□ -1.2
Chd4-201ENSMUST00000056889 Lama1P19137 3084 aa7.53□□□□□ -1.2
Chd4-201ENSMUST00000056889 2310079G19RikQ9D6L6 185 aa7.52□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 53.3 ms