RNA–Protein interactions for RNA: ENSMUST00000000476.14

Pdgfra-201, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdgfra, Length 6,549 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-201ENSMUST00000000476 FlnaQ8BTM8 2647 aaKnown RBP5.39□□□□□ -1.55
Pdgfra-201ENSMUST00000000476 Myo18bE9PV66 2605 aa5.38□□□□□ -1.55
Pdgfra-201ENSMUST00000000476 Krtap13O88375 197 aa5.38□□□□□ -1.55
Pdgfra-201ENSMUST00000000476 BC029722A0A0N4SW31 51 aa5.38□□□□□ -1.55
Pdgfra-201ENSMUST00000000476 Gm19426M0QWC7 77 aa5.38□□□□□ -1.55
Pdgfra-201ENSMUST00000000476 Gm9507D3Z5T3 223 aa5.36□□□□□ -1.55
Pdgfra-201ENSMUST00000000476 Ankrd11E9Q4F7 2643 aa5.35□□□□□ -1.55
Pdgfra-201ENSMUST00000000476 Gm10382Q3V0T5 144 aa5.34□□□□□ -1.55
Pdgfra-201ENSMUST00000000476 Gcn1E9PVA8 2671 aaKnown RBP5.33□□□□□ -1.56
Pdgfra-201ENSMUST00000000476 4933415A04RikQ9D443 101 aa5.33□□□□□ -1.56
Pdgfra-201ENSMUST00000000476 AtrQ9JKK8 2635 aa5.32□□□□□ -1.56
Pdgfra-201ENSMUST00000000476 Gm2310J3QNJ2 377 aa5.32□□□□□ -1.56
Pdgfra-201ENSMUST00000000476 Krtap14O08640 167 aa5.31□□□□□ -1.56
Pdgfra-201ENSMUST00000000476 Usp24B1AY13 2617 aaKnown RBP5.3□□□□□ -1.56
Pdgfra-201ENSMUST00000000476 Dnah12Q3V0Q1 3086 aa5.3□□□□□ -1.56
Pdgfra-201ENSMUST00000000476 Ep400Q8CHI8 3072 aaKnown RBP5.28□□□□□ -1.56
Pdgfra-201ENSMUST00000000476 FasnP19096 2504 aaKnown RBP5.28□□□□□ -1.56
Pdgfra-201ENSMUST00000000476 1700042G07RikB1AUF7 90 aa5.28□□□□□ -1.56
Pdgfra-201ENSMUST00000000476 Rps29P62274 56 aa5.28□□□□□ -1.56
Pdgfra-201ENSMUST00000000476 2310061N02RikQ9D6S9 174 aa5.28□□□□□ -1.56
Pdgfra-201ENSMUST00000000476 Krtap10-4Q08EG8 221 aa5.27□□□□□ -1.57
Pdgfra-201ENSMUST00000000476 HrnrQ8VHD8 2496 aa5.26□□□□□ -1.57
Pdgfra-201ENSMUST00000000476 Gm42715A0A087WP63 3095 aaKnown RBP5.26□□□□□ -1.57
Pdgfra-201ENSMUST00000000476 FlnbQ80X90 2602 aaKnown RBP5.25□□□□□ -1.57
Pdgfra-201ENSMUST00000000476 Fn1P11276 2477 aaKnown RBP5.22□□□□□ -1.57
Pdgfra-201ENSMUST00000000476 Tnp2P11378 117 aa5.22□□□□□ -1.57
Pdgfra-201ENSMUST00000000476 Hectd1Q69ZR2 2618 aaKnown RBP5.21□□□□□ -1.58
Pdgfra-201ENSMUST00000000476 Cox6b2Q80ZN9 88 aa5.21□□□□□ -1.58
Pdgfra-201ENSMUST00000000476 Krtap10-10A0A1W2P7T6 217 aa5.2□□□□□ -1.58
Pdgfra-201ENSMUST00000000476 Notch1Q01705 2531 aa5.2□□□□□ -1.58
Pdgfra-201ENSMUST00000000476 Prune2Q52KR3 3084 aa5.18□□□□□ -1.58
Pdgfra-201ENSMUST00000000476 PcntP48725 2898 aa5.17□□□□□ -1.58
Pdgfra-201ENSMUST00000000476 UtrnE9Q6R7 3430 aa5.16□□□□□ -1.58
Pdgfra-201ENSMUST00000000476 SmcpP15265 143 aa5.16□□□□□ -1.58
Pdgfra-201ENSMUST00000000476 Stab1Q8R4Y4 2571 aa5.16□□□□□ -1.58
Pdgfra-201ENSMUST00000000476 Prrc2cQ3TLH4 2846 aaKnown RBP5.13□□□□□ -1.59
Pdgfra-201ENSMUST00000000476 Cep350E9Q309 3095 aa5.13□□□□□ -1.59
Pdgfra-201ENSMUST00000000476 Bod1lE9Q6J5 3032 aa5.13□□□□□ -1.59
Pdgfra-201ENSMUST00000000476 Jbts17Q8CE72 3214 aa5.13□□□□□ -1.59
Pdgfra-201ENSMUST00000000476 D6Ertd527eA0A0N4SWI3 464 aa5.12□□□□□ -1.59
Pdgfra-201ENSMUST00000000476 Gm2696A0A1W2P709 240 aa5.07□□□□□ -1.6
Pdgfra-201ENSMUST00000000476 NipblQ6KCD5 2798 aaKnown RBP5.07□□□□□ -1.6
Pdgfra-201ENSMUST00000000476 Gm21887J3QQ04 176 aa5.06□□□□□ -1.6
Pdgfra-201ENSMUST00000000476 Itpr3P70227 2670 aa5.03□□□□□ -1.6
Pdgfra-201ENSMUST00000000476 Chd7A2AJK6 2986 aaKnown RBP5.02□□□□□ -1.61
Pdgfra-201ENSMUST00000000476 Map1aQ9QYR6 2776 aa5.02□□□□□ -1.61
Pdgfra-201ENSMUST00000000476 Col12a1Q60847 3120 aa5.01□□□□□ -1.61
Pdgfra-201ENSMUST00000000476 Mast4Q811L6 2618 aa5.01□□□□□ -1.61
Pdgfra-201ENSMUST00000000476 Tnrc18Q80WC3 2878 aa5.01□□□□□ -1.61
Pdgfra-201ENSMUST00000000476 Kmt2bO08550 2713 aa5□□□□□ -1.61
Pdgfra-201ENSMUST00000000476 TrioQ0KL02 3102 aa4.99□□□□□ -1.61
Pdgfra-201ENSMUST00000000476 Tep1P97499 2629 aa4.99□□□□□ -1.61
Pdgfra-201ENSMUST00000000476 Gm5965D3Z724 196 aa4.98□□□□□ -1.61
Pdgfra-201ENSMUST00000000476 Ndufaf8A2AMZ4 74 aa4.98□□□□□ -1.61
Pdgfra-201ENSMUST00000000476 Igsf10Q3V1M1 2594 aa4.97□□□□□ -1.61
Pdgfra-201ENSMUST00000000476 Akap13E9Q394 2776 aa4.97□□□□□ -1.61
Pdgfra-201ENSMUST00000000476 Lama3Q61789 3330 aa4.97□□□□□ -1.61
Pdgfra-201ENSMUST00000000476 MgaA2AWL7 3003 aaKnown RBP4.97□□□□□ -1.61
Pdgfra-201ENSMUST00000000476 Chd6A3KFM7 2711 aa4.96□□□□□ -1.62
Pdgfra-201ENSMUST00000000476 2310057N15RikQ9D6T8 200 aa4.95□□□□□ -1.62
Pdgfra-201ENSMUST00000000476 Rev3lQ61493 3122 aa4.94□□□□□ -1.62
Pdgfra-201ENSMUST00000000476 Dmxl1Q6PNC0 3013 aa4.94□□□□□ -1.62
Pdgfra-201ENSMUST00000000476 Itpr1P11881 2749 aa4.93□□□□□ -1.62
Pdgfra-201ENSMUST00000000476 Tnp1P10856 55 aa4.93□□□□□ -1.62
Pdgfra-201ENSMUST00000000476 Myo15bI7HPW8 3033 aa4.91□□□□□ -1.62
Pdgfra-201ENSMUST00000000476 Ash1lQ99MY8 2958 aa4.9□□□□□ -1.62
Pdgfra-201ENSMUST00000000476 9530053A07RikE9PVG8 2581 aa4.9□□□□□ -1.63
Pdgfra-201ENSMUST00000000476 Stab2Q8R4U0 2559 aa4.9□□□□□ -1.63
Pdgfra-201ENSMUST00000000476 Gm40193A0A1B0GT39 78 aa4.89□□□□□ -1.63
Pdgfra-201ENSMUST00000000476 Fbn2Q61555 2907 aa4.89□□□□□ -1.63
Pdgfra-201ENSMUST00000000476 HttP42859 3119 aa4.89□□□□□ -1.63
Pdgfra-201ENSMUST00000000476 Ubr5Q80TP3 2792 aa4.88□□□□□ -1.63
Pdgfra-201ENSMUST00000000476 Mki67E9PVX6 3177 aaKnown RBP4.88□□□□□ -1.63
Pdgfra-201ENSMUST00000000476 Lama2Q60675 3118 aaKnown RBP4.87□□□□□ -1.63
Pdgfra-201ENSMUST00000000476 Ranbp2Q9ERU9 3053 aaKnown RBP4.85□□□□□ -1.63
Pdgfra-201ENSMUST00000000476 Nbeal2Q6ZQA0 2742 aa4.85□□□□□ -1.63
Pdgfra-201ENSMUST00000000476 Gm20537G3UYK7 97 aa4.84□□□□□ -1.64
Pdgfra-201ENSMUST00000000476 Usp34Q6ZQ93 3582 aa4.83□□□□□ -1.64
Pdgfra-201ENSMUST00000000476 Gm7173A0A0G2JEB6 3132 aa4.81□□□□□ -1.64
Pdgfra-201ENSMUST00000000476 KalrnA2CG49 2964 aa4.8□□□□□ -1.64
Pdgfra-201ENSMUST00000000476 Gm9112A2AI92 75 aa4.79□□□□□ -1.64
Pdgfra-201ENSMUST00000000476 A930033H14RikG5E8X6 103 aa4.79□□□□□ -1.64
Pdgfra-201ENSMUST00000000476 B930094E09RikQ8C4T2 136 aa4.78□□□□□ -1.64
Pdgfra-201ENSMUST00000000476 Itpr2Q9Z329 2701 aa4.77□□□□□ -1.65
Pdgfra-201ENSMUST00000000476 Pkd1l1Q8R526 2615 aa4.75□□□□□ -1.65
Pdgfra-201ENSMUST00000000476 Cdh23Q99PF4 3354 aa4.75□□□□□ -1.65
Pdgfra-201ENSMUST00000000476 TgO08710 2766 aa4.74□□□□□ -1.65
Pdgfra-201ENSMUST00000000476 FcgbpE9Q0B5 2583 aa4.74□□□□□ -1.65
Pdgfra-201ENSMUST00000000476 Muc2Q80Z19 2680 aa4.74□□□□□ -1.65
Pdgfra-201ENSMUST00000000476 Celsr1O35161 3034 aa4.72□□□□□ -1.65
Pdgfra-201ENSMUST00000000476 2310079G19RikQ9D6L6 185 aa4.72□□□□□ -1.65
Pdgfra-201ENSMUST00000000476 Cfap54Q8C6S9 3106 aa4.7□□□□□ -1.66
Pdgfra-201ENSMUST00000000476 Col6a5A6H584 2640 aa4.69□□□□□ -1.66
Pdgfra-201ENSMUST00000000476 Srrm2Q8BTI8 2703 aaKnown RBP4.69□□□□□ -1.66
Pdgfra-201ENSMUST00000000476 Hivep1Q03172 2688 aa4.68□□□□□ -1.66
Pdgfra-201ENSMUST00000000476 Utp20Q5XG71 2788 aaKnown RBP4.68□□□□□ -1.66
Pdgfra-201ENSMUST00000000476 Gm17416Q30KP4 66 aa4.67□□□□□ -1.66
Pdgfra-201ENSMUST00000000476 Gm9736A0A1W2P7N1 277 aa4.64□□□□□ -1.67
Pdgfra-201ENSMUST00000000476 Zfhx3Q61329 3726 aa4.64□□□□□ -1.67
Pdgfra-201ENSMUST00000000476 ApcQ61315 2845 aa4.64□□□□□ -1.67
Retrieved 100 of 22,080 RNA–protein pairs in 171.2 ms