RNA–Protein interactions for RNA: ENSMUST00000107935.7

Shank1-202, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-202ENSMUST00000107935 6430550D23RikE9Q1X6 194 aa10.82□□□□□ -0.68
Shank1-202ENSMUST00000107935 Gm4707V9GXN5 68 aa10.82□□□□□ -0.68
Shank1-202ENSMUST00000107935 Tanc2A2A690 1994 aa10.81□□□□□ -0.68
Shank1-202ENSMUST00000107935 Nupr2Q497P3 102 aa10.81□□□□□ -0.68
Shank1-202ENSMUST00000107935 Gm12216A0A1W2P827 62 aa10.81□□□□□ -0.68
Shank1-202ENSMUST00000107935 1700056E22RikF7CNM6 234 aa10.81□□□□□ -0.68
Shank1-202ENSMUST00000107935 Asxl3Q8C4A5 2259 aa10.81□□□□□ -0.68
Shank1-202ENSMUST00000107935 Ros1Q78DX7 2340 aa10.81□□□□□ -0.68
Shank1-202ENSMUST00000107935 Gm10300Q8C8P7 189 aa10.8□□□□□ -0.68
Shank1-202ENSMUST00000107935 Znf580Q9DB38 172 aa10.8□□□□□ -0.68
Shank1-202ENSMUST00000107935 Ighv2-5A0A0A6YY69 116 aa10.79□□□□□ -0.68
Shank1-202ENSMUST00000107935 Shisa2Q8QZV2 295 aa10.79□□□□□ -0.68
Shank1-202ENSMUST00000107935 Sptbn1Q62261 2363 aaKnown RBP10.79□□□□□ -0.68
Shank1-202ENSMUST00000107935 2310034G01RikA0A286YDL3 209 aa10.79□□□□□ -0.68
Shank1-202ENSMUST00000107935 Fam19a3Q7TPG6 132 aa10.79□□□□□ -0.68
Shank1-202ENSMUST00000107935 Sdk1Q3UH53 2193 aa10.78□□□□□ -0.68
Shank1-202ENSMUST00000107935 Gm10160F6Y577 67 aa10.78□□□□□ -0.68
Shank1-202ENSMUST00000107935 AcacaQ5SWU9 2345 aa10.78□□□□□ -0.68
Shank1-202ENSMUST00000107935 Mrpl34Q99N91 92 aa10.78□□□□□ -0.68
Shank1-202ENSMUST00000107935 Qrich2A0A140LIY9 2337 aa10.78□□□□□ -0.68
Shank1-202ENSMUST00000107935 Odf3l2Q3TZ65 277 aa10.77□□□□□ -0.68
Shank1-202ENSMUST00000107935 Plxnb1Q8CJH3 2119 aa10.77□□□□□ -0.69
Shank1-202ENSMUST00000107935 Gm28230A0A0A0MQ91 144 aa10.77□□□□□ -0.69
Shank1-202ENSMUST00000107935 Wfdc17Q5SSJ1 76 aa10.77□□□□□ -0.69
Shank1-202ENSMUST00000107935 Gm9922Q8C3P1 144 aa10.76□□□□□ -0.69
Shank1-202ENSMUST00000107935 AvpP35455 168 aa10.75□□□□□ -0.69
Shank1-202ENSMUST00000107935 Cep250Q60952 2414 aa10.75□□□□□ -0.69
Shank1-202ENSMUST00000107935 Reg3aO09037 175 aa10.75□□□□□ -0.69
Shank1-202ENSMUST00000107935 A730009L09RikA0A1B0GS82 72 aa10.75□□□□□ -0.69
Shank1-202ENSMUST00000107935 Rtl10D3YWW5 146 aa10.74□□□□□ -0.69
Shank1-202ENSMUST00000107935 Limd2Q8BGB5 128 aa10.73□□□□□ -0.69
Shank1-202ENSMUST00000107935 Prpf8Q99PV0 2335 aaKnown RBP10.73□□□□□ -0.69
Shank1-202ENSMUST00000107935 Zfand2aQ9JII7 171 aa10.73□□□□□ -0.69
Shank1-202ENSMUST00000107935 Ighv2-2A0A075B5P8 116 aa10.72□□□□□ -0.69
Shank1-202ENSMUST00000107935 P01821 116 aa10.72□□□□□ -0.69
Shank1-202ENSMUST00000107935 AI854703Q8BIN3 203 aa10.72□□□□□ -0.69
Shank1-202ENSMUST00000107935 Defb37Q7TMD2 62 aa10.71□□□□□ -0.69
Shank1-202ENSMUST00000107935 AtrxQ61687 2476 aaKnown RBP10.71□□□□□ -0.69
Shank1-202ENSMUST00000107935 Cox6a2P43023 97 aa10.71□□□□□ -0.7
Shank1-202ENSMUST00000107935 Armcx4E9PWM3 2356 aa10.71□□□□□ -0.7
Shank1-202ENSMUST00000107935 Fam208bQ5DTT3 2382 aa10.71□□□□□ -0.7
Shank1-202ENSMUST00000107935 Cacna1gQ5SUF7 2381 aa10.71□□□□□ -0.7
Shank1-202ENSMUST00000107935 Pla2g1bQ9Z0Y2 146 aa10.7□□□□□ -0.7
Shank1-202ENSMUST00000107935 Ighv2-9A0A075B5Q5 116 aa10.69□□□□□ -0.7
Shank1-202ENSMUST00000107935 Igkv8-19A0A0G2JFN8 121 aa10.69□□□□□ -0.7
Shank1-202ENSMUST00000107935 Q9DAA7 145 aa10.69□□□□□ -0.7
Shank1-202ENSMUST00000107935 Gm20661K7N787 53 aa10.69□□□□□ -0.7
Shank1-202ENSMUST00000107935 7530416G11RikJ3QJX6 159 aa10.69□□□□□ -0.7
Shank1-202ENSMUST00000107935 Q9DAB9 146 aa10.69□□□□□ -0.7
Shank1-202ENSMUST00000107935 Msrb1Q9JLC3 116 aa10.69□□□□□ -0.7
Shank1-202ENSMUST00000107935 Adamts20P59511 1906 aa10.68□□□□□ -0.7
Shank1-202ENSMUST00000107935 Pip4p1Q3TWL2 284 aa10.68□□□□□ -0.7
Shank1-202ENSMUST00000107935 Chchd10Q7TNL9 138 aa10.67□□□□□ -0.7
Shank1-202ENSMUST00000107935 FshbQ60687 130 aa10.67□□□□□ -0.7
Shank1-202ENSMUST00000107935 Znf414Q9DCK4 299 aa10.67□□□□□ -0.7
Shank1-202ENSMUST00000107935 A930009A15RikG3UYI6 118 aa10.67□□□□□ -0.7
Shank1-202ENSMUST00000107935 Igkv8-27A0A0G2JF28 120 aa10.66□□□□□ -0.7
Shank1-202ENSMUST00000107935 Igf2rQ07113 2483 aaKnown RBP10.66□□□□□ -0.7
Shank1-202ENSMUST00000107935 Mp68P56379 58 aa10.65□□□□□ -0.7
Shank1-202ENSMUST00000107935 Arhgef17Q80U35 2057 aa10.65□□□□□ -0.7
Shank1-202ENSMUST00000107935 Ighv8-13A0A075B5Y0 101 aa10.64□□□□□ -0.71
Shank1-202ENSMUST00000107935 3110070M22RikQ9DAQ7 118 aa10.64□□□□□ -0.71
Shank1-202ENSMUST00000107935 Abca1P41233 2261 aa10.64□□□□□ -0.71
Shank1-202ENSMUST00000107935 Dopey2Q3UHQ6 2295 aa10.64□□□□□ -0.71
Shank1-202ENSMUST00000107935 Gm17606F6ZL36 78 aa10.64□□□□□ -0.71
Shank1-202ENSMUST00000107935 Adm2Q7TNK8 150 aa10.64□□□□□ -0.71
Shank1-202ENSMUST00000107935 Cfap46E9Q2C0 2641 aa10.64□□□□□ -0.71
Shank1-202ENSMUST00000107935 Sdk2Q6V4S5 2176 aa10.63□□□□□ -0.71
Shank1-202ENSMUST00000107935 Cnot1Q6ZQ08 2375 aaKnown RBP10.63□□□□□ -0.71
Shank1-202ENSMUST00000107935 D730001G18RikA0A087WQU7 115 aa10.63□□□□□ -0.71
Shank1-202ENSMUST00000107935 Pcnx1Q9QYC1 2344 aa10.63□□□□□ -0.71
Shank1-202ENSMUST00000107935 Wdr90Q6ZPG2 1874 aa10.63□□□□□ -0.71
Shank1-202ENSMUST00000107935 Ncor2Q9WU42 2472 aaKnown RBP10.62□□□□□ -0.71
Shank1-202ENSMUST00000107935 Gm9925F6T2U3 160 aa10.62□□□□□ -0.71
Shank1-202ENSMUST00000107935 DysfQ9ESD7 2090 aa10.62□□□□□ -0.71
Shank1-202ENSMUST00000107935 Ncor1Q60974 2453 aa10.62□□□□□ -0.71
Shank1-202ENSMUST00000107935 1700018G05RikA0A1B0GSI2 66 aa10.62□□□□□ -0.71
Shank1-202ENSMUST00000107935 Lce6aD3YV94 81 aa10.62□□□□□ -0.71
Shank1-202ENSMUST00000107935 AI606181Q8C7B9 129 aa10.6□□□□□ -0.71
Shank1-202ENSMUST00000107935 Gm10308Q9CVR5 141 aa10.6□□□□□ -0.71
Shank1-202ENSMUST00000107935 Coa5Q99M07 74 aa10.59□□□□□ -0.71
Shank1-202ENSMUST00000107935 Cd164l2Q9D6W7 172 aa10.58□□□□□ -0.71
Shank1-202ENSMUST00000107935 Cdc42se1Q8BHL7 80 aa10.58□□□□□ -0.72
Shank1-202ENSMUST00000107935 Gm3443F7CCV5 94 aa10.56□□□□□ -0.72
Shank1-202ENSMUST00000107935 Col6a4A2AX52 2309 aa10.56□□□□□ -0.72
Shank1-202ENSMUST00000107935 Usf3B2RUQ2 2221 aa10.55□□□□□ -0.72
Shank1-202ENSMUST00000107935 Gm21886J3QJU9 214 aa10.55□□□□□ -0.72
Shank1-202ENSMUST00000107935 AplnQ9R0R4 77 aa10.55□□□□□ -0.72
Shank1-202ENSMUST00000107935 Gm10999F6Q4M4 69 aa10.55□□□□□ -0.72
Shank1-202ENSMUST00000107935 Prrc2aQ7TSC1 2158 aaKnown RBP10.55□□□□□ -0.72
Shank1-202ENSMUST00000107935 Defb39Q70KL3 74 aa10.54□□□□□ -0.72
Shank1-202ENSMUST00000107935 Gm16485Q8C4B7 115 aa10.54□□□□□ -0.72
Shank1-202ENSMUST00000107935 Gm44790A0A0N4SV91 103 aa10.54□□□□□ -0.72
Shank1-202ENSMUST00000107935 Gm10643Q3URG9 111 aa10.54□□□□□ -0.72
Shank1-202ENSMUST00000107935 Elof1P60003 83 aa10.53□□□□□ -0.72
Shank1-202ENSMUST00000107935 Znf575Q3TXZ1 239 aa10.53□□□□□ -0.72
Shank1-202ENSMUST00000107935 A930002H24RikQ8C8Y3 163 aa10.53□□□□□ -0.72
Shank1-202ENSMUST00000107935 Tns1E9Q0S6 1888 aaKnown RBP10.53□□□□□ -0.72
Shank1-202ENSMUST00000107935 Pcnx3Q8VI59 2028 aa10.53□□□□□ -0.72
Shank1-202ENSMUST00000107935 Pcnx2Q5DU28 2122 aa10.53□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 55.1 ms