RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 A0A286YCN5 57 aa16.7■□□□□ 0.26
Sh3rf1-201ENSMUST00000034060 Znf575Q3TXZ1 239 aa16.68■□□□□ 0.26
Sh3rf1-201ENSMUST00000034060 NrgnP60761 78 aa16.68■□□□□ 0.26
Sh3rf1-201ENSMUST00000034060 Arid1bE9Q4N7 2244 aa16.67■□□□□ 0.26
Sh3rf1-201ENSMUST00000034060 Abca4O35600 2310 aa16.67■□□□□ 0.26
Sh3rf1-201ENSMUST00000034060 SbsponQ3UPR9 264 aa16.67■□□□□ 0.26
Sh3rf1-201ENSMUST00000034060 Igf2rQ07113 2483 aaKnown RBP16.66■□□□□ 0.26
Sh3rf1-201ENSMUST00000034060 Pcnx3Q8VI59 2028 aa16.66■□□□□ 0.26
Sh3rf1-201ENSMUST00000034060 F5O88783 2183 aa16.66■□□□□ 0.26
Sh3rf1-201ENSMUST00000034060 Gm17509Q9CZ61 145 aa16.66■□□□□ 0.26
Sh3rf1-201ENSMUST00000034060 Ighv1-56A0A0A6YXG2 117 aa16.65■□□□□ 0.26
Sh3rf1-201ENSMUST00000034060 Rps28P62858 69 aaKnown RBP16.64■□□□□ 0.25
Sh3rf1-201ENSMUST00000034060 Crip2Q9DCT8 208 aaKnown RBP16.63■□□□□ 0.25
Sh3rf1-201ENSMUST00000034060 Ighv2-9A0A075B5Q5 116 aa16.62■□□□□ 0.25
Sh3rf1-201ENSMUST00000034060 SnurfQ9WU12 71 aa16.62■□□□□ 0.25
Sh3rf1-201ENSMUST00000034060 A930009A15RikG3UYI6 118 aa16.62■□□□□ 0.25
Sh3rf1-201ENSMUST00000034060 PscaP57096 123 aa16.61■□□□□ 0.25
Sh3rf1-201ENSMUST00000034060 Gm10267M0QWD8 85 aa16.6■□□□□ 0.25
Sh3rf1-201ENSMUST00000034060 2310009B15RikA0A0A6YWI4 143 aa16.59■□□□□ 0.25
Sh3rf1-201ENSMUST00000034060 Gm10570F6VB42 170 aa16.59■□□□□ 0.25
Sh3rf1-201ENSMUST00000034060 Nupr2Q497P3 102 aa16.59■□□□□ 0.25
Sh3rf1-201ENSMUST00000034060 DysfQ9ESD7 2090 aa16.59■□□□□ 0.25
Sh3rf1-201ENSMUST00000034060 4930518I15RikQ3V2W7 57 aa16.58■□□□□ 0.24
Sh3rf1-201ENSMUST00000034060 Prrc2aQ7TSC1 2158 aaKnown RBP16.58■□□□□ 0.24
Sh3rf1-201ENSMUST00000034060 Pla2g1bQ9Z0Y2 146 aa16.58■□□□□ 0.24
Sh3rf1-201ENSMUST00000034060 Ighv2-5A0A0A6YY69 116 aa16.57■□□□□ 0.24
Sh3rf1-201ENSMUST00000034060 Gm4707V9GXN5 68 aa16.57■□□□□ 0.24
Sh3rf1-201ENSMUST00000034060 C130032M10RikQ8C888 123 aa16.57■□□□□ 0.24
Sh3rf1-201ENSMUST00000034060 Zfand2aQ9JII7 171 aa16.56■□□□□ 0.24
Sh3rf1-201ENSMUST00000034060 Pcnx2Q5DU28 2122 aa16.56■□□□□ 0.24
Sh3rf1-201ENSMUST00000034060 CrygfQ9CXV3 174 aa16.56■□□□□ 0.24
Sh3rf1-201ENSMUST00000034060 TroQ6DIC6 2087 aa16.56■□□□□ 0.24
Sh3rf1-201ENSMUST00000034060 Defb45Q3V490 66 aa16.55■□□□□ 0.24
Sh3rf1-201ENSMUST00000034060 Wfdc13Q5DQQ6 81 aa16.55■□□□□ 0.24
Sh3rf1-201ENSMUST00000034060 Spint4Q9D263 159 aa16.55■□□□□ 0.24
Sh3rf1-201ENSMUST00000034060 Rtl10D3YWW5 146 aa16.54■□□□□ 0.24
Sh3rf1-201ENSMUST00000034060 Coa6Q8BGD8 79 aa16.54■□□□□ 0.24
Sh3rf1-201ENSMUST00000034060 Tns1E9Q0S6 1888 aaKnown RBP16.54■□□□□ 0.24
Sh3rf1-201ENSMUST00000034060 Apoc4Q61268 124 aa16.54■□□□□ 0.24
Sh3rf1-201ENSMUST00000034060 Ighv8-13A0A075B5Y0 101 aa16.52■□□□□ 0.24
Sh3rf1-201ENSMUST00000034060 Gm3443F7CCV5 94 aa16.5■□□□□ 0.23
Sh3rf1-201ENSMUST00000034060 Odf3l2Q3TZ65 277 aa16.5■□□□□ 0.23
Sh3rf1-201ENSMUST00000034060 3110070M22RikQ9DAQ7 118 aa16.5■□□□□ 0.23
Sh3rf1-201ENSMUST00000034060 Lce6aD3YV94 81 aa16.46■□□□□ 0.23
Sh3rf1-201ENSMUST00000034060 Znf580Q9DB38 172 aa16.46■□□□□ 0.23
Sh3rf1-201ENSMUST00000034060 Prr9Q8BV84 116 aa16.46■□□□□ 0.23
Sh3rf1-201ENSMUST00000034060 Cd164Q9R0L9 197 aa16.46■□□□□ 0.23
Sh3rf1-201ENSMUST00000034060 Ighv2-2A0A075B5P8 116 aa16.46■□□□□ 0.22
Sh3rf1-201ENSMUST00000034060 P01821 116 aa16.46■□□□□ 0.22
Sh3rf1-201ENSMUST00000034060 Sdk1Q3UH53 2193 aa16.45■□□□□ 0.22
Sh3rf1-201ENSMUST00000034060 Igkv3-7A0A0G2JE31 119 aa16.44■□□□□ 0.22
Sh3rf1-201ENSMUST00000034060 Igkv8-28A0A0G2JE47 121 aa16.43■□□□□ 0.22
Sh3rf1-201ENSMUST00000034060 Gm9573F7C950 1606 aa16.43■□□□□ 0.22
Sh3rf1-201ENSMUST00000034060 CrygeQ03740 174 aa16.43■□□□□ 0.22
Sh3rf1-201ENSMUST00000034060 Cd164l2Q9D6W7 172 aa16.43■□□□□ 0.22
Sh3rf1-201ENSMUST00000034060 Gm9887F6RFI0 207 aa16.43■□□□□ 0.22
Sh3rf1-201ENSMUST00000034060 Gm43218A0A0G2JGT0 114 aa16.42■□□□□ 0.22
Sh3rf1-201ENSMUST00000034060 Notch3Q61982 2318 aa16.41■□□□□ 0.22
Sh3rf1-201ENSMUST00000034060 D730001G18RikA0A087WQU7 115 aa16.41■□□□□ 0.22
Sh3rf1-201ENSMUST00000034060 Gm10197F6QEY5 67 aa16.39■□□□□ 0.21
Sh3rf1-201ENSMUST00000034060 Krtap16-1A2A5X5 502 aa16.39■□□□□ 0.21
Sh3rf1-201ENSMUST00000034060 Gm5464Q3UY29 175 aa16.39■□□□□ 0.21
Sh3rf1-201ENSMUST00000034060 CenpeQ6RT24 2474 aaKnown RBP16.39■□□□□ 0.21
Sh3rf1-201ENSMUST00000034060 Pcsk5Q04592 1877 aa16.38■□□□□ 0.21
Sh3rf1-201ENSMUST00000034060 Chchd10Q7TNL9 138 aa16.37■□□□□ 0.21
Sh3rf1-201ENSMUST00000034060 Sec16aA2AIX1 2377 aa16.36■□□□□ 0.21
Sh3rf1-201ENSMUST00000034060 Wfdc6bF6ULY1 148 aa16.36■□□□□ 0.21
Sh3rf1-201ENSMUST00000034060 Defb38Q7TNV7 63 aa16.36■□□□□ 0.21
Sh3rf1-201ENSMUST00000034060 P01819 144 aa16.35■□□□□ 0.21
Sh3rf1-201ENSMUST00000034060 Q9DAA7 145 aa16.34■□□□□ 0.21
Sh3rf1-201ENSMUST00000034060 Gm9767G3X930 207 aa16.34■□□□□ 0.21
Sh3rf1-201ENSMUST00000034060 Gm28230A0A0A0MQ91 144 aa16.34■□□□□ 0.21
Sh3rf1-201ENSMUST00000034060 Ncor1Q60974 2453 aa16.33■□□□□ 0.2
Sh3rf1-201ENSMUST00000034060 DscamQ9ERC8 2013 aa16.32■□□□□ 0.2
Sh3rf1-201ENSMUST00000034060 Cox6a2P43023 97 aa16.3■□□□□ 0.2
Sh3rf1-201ENSMUST00000034060 AcanQ61282 2132 aaKnown RBP16.3■□□□□ 0.2
Sh3rf1-201ENSMUST00000034060 Mrpl34Q99N91 92 aa16.29■□□□□ 0.2
Sh3rf1-201ENSMUST00000034060 Limd2Q8BGB5 128 aa16.26■□□□□ 0.19
Sh3rf1-201ENSMUST00000034060 Bean1Q9EQG5 255 aa16.26■□□□□ 0.19
Sh3rf1-201ENSMUST00000034060 Cspg4Q8VHY0 2327 aa16.26■□□□□ 0.19
Sh3rf1-201ENSMUST00000034060 Gm10160F6Y577 67 aa16.25■□□□□ 0.19
Sh3rf1-201ENSMUST00000034060 Lrp4Q8VI56 1905 aa16.25■□□□□ 0.19
Sh3rf1-201ENSMUST00000034060 A530084C06RikQ3UTW2 186 aa16.25■□□□□ 0.19
Sh3rf1-201ENSMUST00000034060 Gvin1Q80SU7 2427 aa16.25■□□□□ 0.19
Sh3rf1-201ENSMUST00000034060 Msrb1Q9JLC3 116 aa16.24■□□□□ 0.19
Sh3rf1-201ENSMUST00000034060 Fam19a3Q7TPG6 132 aa16.24■□□□□ 0.19
Sh3rf1-201ENSMUST00000034060 Gm16485Q8C4B7 115 aa16.22■□□□□ 0.19
Sh3rf1-201ENSMUST00000034060 PtprbB2RU80 1998 aa16.21■□□□□ 0.19
Sh3rf1-201ENSMUST00000034060 Dopey1Q8BL99 2399 aa16.2■□□□□ 0.18
Sh3rf1-201ENSMUST00000034060 4930519P11RikQ9CUJ8 166 aa16.2■□□□□ 0.18
Sh3rf1-201ENSMUST00000034060 Reg3aO09037 175 aa16.19■□□□□ 0.18
Sh3rf1-201ENSMUST00000034060 Arhgap32Q811P8 2089 aa16.19■□□□□ 0.18
Sh3rf1-201ENSMUST00000034060 Gm10300Q8C8P7 189 aa16.19■□□□□ 0.18
Sh3rf1-201ENSMUST00000034060 Bri3P28662 125 aa16.18■□□□□ 0.18
Sh3rf1-201ENSMUST00000034060 Igkv8-19A0A0G2JFN8 121 aa16.18■□□□□ 0.18
Sh3rf1-201ENSMUST00000034060 Med13lQ6JPI3 2207 aa16.18■□□□□ 0.18
Sh3rf1-201ENSMUST00000034060 6430550D23RikE9Q1X6 194 aa16.18■□□□□ 0.18
Sh3rf1-201ENSMUST00000034060 CrygaP04345 174 aa16.18■□□□□ 0.18
Sh3rf1-201ENSMUST00000034060 Gm9903Q8C9Y8 129 aa16.18■□□□□ 0.18
Sh3rf1-201ENSMUST00000034060 Adm2Q7TNK8 150 aa16.17■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms