RNA–Protein interactions for RNA: ENSMUST00000165375.2

Hoxc4-202, Transcript of Homeobox protein Hox-C4, mousemouse

TSL 1 (best) BASIC

Gene Hoxc4, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4-202ENSMUST00000165375 P06328 117 aa12.21□□□□□ -0.45
Hoxc4-202ENSMUST00000165375 FcorP0DJI6 106 aa12.21□□□□□ -0.45
Hoxc4-202ENSMUST00000165375 Gatd1Q8BFQ8 220 aa12.21□□□□□ -0.45
Hoxc4-202ENSMUST00000165375 Csdc2Q91YQ3 154 aa12.21□□□□□ -0.45
Hoxc4-202ENSMUST00000165375 P01786 117 aa12.2□□□□□ -0.46
Hoxc4-202ENSMUST00000165375 4930470P17RikQ9D542 155 aa12.2□□□□□ -0.46
Hoxc4-202ENSMUST00000165375 Ighv1-85A0A075B5Y6 117 aa12.2□□□□□ -0.46
Hoxc4-202ENSMUST00000165375 Gm29423A0A087WRM1 55 aa12.2□□□□□ -0.46
Hoxc4-202ENSMUST00000165375 Gm17732E9Q5I2 61 aa12.2□□□□□ -0.46
Hoxc4-202ENSMUST00000165375 P01747 120 aa12.2□□□□□ -0.46
Hoxc4-202ENSMUST00000165375 Gm21748Q3UE70 102 aa12.2□□□□□ -0.46
Hoxc4-202ENSMUST00000165375 C1qcQ02105 246 aa12.19□□□□□ -0.46
Hoxc4-202ENSMUST00000165375 Cfap126Q6P8X9 189 aa12.19□□□□□ -0.46
Hoxc4-202ENSMUST00000165375 Mfap4Q9D1H9 257 aa12.19□□□□□ -0.46
Hoxc4-202ENSMUST00000165375 Trav7-6A0A075B640 112 aa12.19□□□□□ -0.46
Hoxc4-202ENSMUST00000165375 Gm10300Q8C8P7 189 aa12.19□□□□□ -0.46
Hoxc4-202ENSMUST00000165375 Ifitm1Q9D103 106 aa12.19□□□□□ -0.46
Hoxc4-202ENSMUST00000165375 Timm17bQ9Z0V7 172 aa12.19□□□□□ -0.46
Hoxc4-202ENSMUST00000165375 Dmbt1Q60997 2085 aa12.18□□□□□ -0.46
Hoxc4-202ENSMUST00000165375 Trav4-3A0A0B4J1K1 110 aa12.18□□□□□ -0.46
Hoxc4-202ENSMUST00000165375 GalmQ8K157 342 aa12.18□□□□□ -0.46
Hoxc4-202ENSMUST00000165375 Wfdc17Q5SSJ1 76 aa12.17□□□□□ -0.46
Hoxc4-202ENSMUST00000165375 Ighv2-6-8A0A0A6YWY9 116 aa12.16□□□□□ -0.46
Hoxc4-202ENSMUST00000165375 Pglyrp1O88593 182 aa12.16□□□□□ -0.46
Hoxc4-202ENSMUST00000165375 RetnQ99P87 114 aa12.16□□□□□ -0.46
Hoxc4-202ENSMUST00000165375 Ndufa3Q9CQ91 84 aa12.16□□□□□ -0.46
Hoxc4-202ENSMUST00000165375 Eif4ebp1Q60876 117 aa12.16□□□□□ -0.46
Hoxc4-202ENSMUST00000165375 Gm9922Q8C3P1 144 aa12.16□□□□□ -0.46
Hoxc4-202ENSMUST00000165375 Spata3Q9D9T6 193 aa12.16□□□□□ -0.46
Hoxc4-202ENSMUST00000165375 Atp5g1Q9CR84 136 aa12.15□□□□□ -0.46
Hoxc4-202ENSMUST00000165375 Znf414Q9DCK4 299 aa12.15□□□□□ -0.46
Hoxc4-202ENSMUST00000165375 Hivep1Q03172 2688 aa12.15□□□□□ -0.47
Hoxc4-202ENSMUST00000165375 Lypd5Q9D7Z7 256 aa12.14□□□□□ -0.47
Hoxc4-202ENSMUST00000165375 Tex15F8VPN2 2785 aa12.14□□□□□ -0.47
Hoxc4-202ENSMUST00000165375 AngP21570 145 aa12.14□□□□□ -0.47
Hoxc4-202ENSMUST00000165375 AI854703Q8BIN3 203 aa12.14□□□□□ -0.47
Hoxc4-202ENSMUST00000165375 CrygfQ9CXV3 174 aa12.13□□□□□ -0.47
Hoxc4-202ENSMUST00000165375 Prss58Q8BW11 241 aa12.13□□□□□ -0.47
Hoxc4-202ENSMUST00000165375 Krtap27-1E9PX37 202 aa12.12□□□□□ -0.47
Hoxc4-202ENSMUST00000165375 PrlhG3UWC3 86 aa12.12□□□□□ -0.47
Hoxc4-202ENSMUST00000165375 P06329 120 aa12.12□□□□□ -0.47
Hoxc4-202ENSMUST00000165375 Glrp1E9Q9S8 174 aa12.11□□□□□ -0.47
Hoxc4-202ENSMUST00000165375 Fam19a4Q7TPG5 135 aa12.11□□□□□ -0.47
Hoxc4-202ENSMUST00000165375 Zc2hc1bQ9D534 172 aa12.11□□□□□ -0.47
Hoxc4-202ENSMUST00000165375 Rpl35aO55142 110 aa12.1□□□□□ -0.47
Hoxc4-202ENSMUST00000165375 3110070M22RikQ9DAQ7 118 aa12.1□□□□□ -0.47
Hoxc4-202ENSMUST00000165375 Gm9887F6RFI0 207 aa12.1□□□□□ -0.47
Hoxc4-202ENSMUST00000165375 Defa1P11477 93 aa12.1□□□□□ -0.47
Hoxc4-202ENSMUST00000165375 P01753 117 aa12.09□□□□□ -0.47
Hoxc4-202ENSMUST00000165375 Defa2P28309 93 aa12.09□□□□□ -0.47
Hoxc4-202ENSMUST00000165375 Defb42Q8BVB5 75 aa12.09□□□□□ -0.47
Hoxc4-202ENSMUST00000165375 4930415O20RikQ8CDT5 131 aa12.09□□□□□ -0.47
Hoxc4-202ENSMUST00000165375 Tenm1Q9WTS4 2731 aa12.09□□□□□ -0.47
Hoxc4-202ENSMUST00000165375 Prelid3aQ8VE85 172 aa12.08□□□□□ -0.47
Hoxc4-202ENSMUST00000165375 Stab1Q8R4Y4 2571 aa12.08□□□□□ -0.48
Hoxc4-202ENSMUST00000165375 Nbeal2Q6ZQA0 2742 aa12.07□□□□□ -0.48
Hoxc4-202ENSMUST00000165375 Gata1P17679 413 aa12.07□□□□□ -0.48
Hoxc4-202ENSMUST00000165375 Prr3Q811B5 190 aaKnown RBP12.07□□□□□ -0.48
Hoxc4-202ENSMUST00000165375 Defa16P50714 93 aa12.05□□□□□ -0.48
Hoxc4-202ENSMUST00000165375 Rmi2Q3UPE3 149 aa12.05□□□□□ -0.48
Hoxc4-202ENSMUST00000165375 ScxQ64124 207 aa12.05□□□□□ -0.48
Hoxc4-202ENSMUST00000165375 Hspg2Q05793 3707 aaKnown RBP12.05□□□□□ -0.48
Hoxc4-202ENSMUST00000165375 Ighv1-61P01749 117 aa12.05□□□□□ -0.48
Hoxc4-202ENSMUST00000165375 CrygdP04342 174 aa12.05□□□□□ -0.48
Hoxc4-202ENSMUST00000165375 CrygeQ03740 174 aa12.05□□□□□ -0.48
Hoxc4-202ENSMUST00000165375 Defa25Q5G864 92 aa12.05□□□□□ -0.48
Hoxc4-202ENSMUST00000165375 SpinklQ8CEK3 90 aa12.05□□□□□ -0.48
Hoxc4-202ENSMUST00000165375 Igkv4-68A0A0B4J1I7 117 aa12.04□□□□□ -0.48
Hoxc4-202ENSMUST00000165375 Pglyrp4Q0VB07 374 aa12.04□□□□□ -0.48
Hoxc4-202ENSMUST00000165375 Gm10322F7D7I4 111 aa12.03□□□□□ -0.48
Hoxc4-202ENSMUST00000165375 Notch3Q61982 2318 aa12.03□□□□□ -0.48
Hoxc4-202ENSMUST00000165375 Gm815Q3UWS2 115 aa12.02□□□□□ -0.48
Hoxc4-202ENSMUST00000165375 Spag11Q8K4N2 71 aa12.02□□□□□ -0.48
Hoxc4-202ENSMUST00000165375 Gm36176A0A1W2P8D5 158 aa12.02□□□□□ -0.49
Hoxc4-202ENSMUST00000165375 1700010B08RikQ9DAI7 102 aa12.02□□□□□ -0.49
Hoxc4-202ENSMUST00000165375 Phpt1Q9DAK9 124 aa12.02□□□□□ -0.49
Hoxc4-202ENSMUST00000165375 Ighv1-72P01751 139 aa12.01□□□□□ -0.49
Hoxc4-202ENSMUST00000165375 Cops9Q3U898 57 aa12.01□□□□□ -0.49
Hoxc4-202ENSMUST00000165375 4930432M17RikQ3V0W9 174 aa12.01□□□□□ -0.49
Hoxc4-202ENSMUST00000165375 Gm10490F6VBM2 120 aa12.01□□□□□ -0.49
Hoxc4-202ENSMUST00000165375 P01738 130 aa12.01□□□□□ -0.49
Hoxc4-202ENSMUST00000165375 CirbpP60824 172 aaKnown RBP12.01□□□□□ -0.49
Hoxc4-202ENSMUST00000165375 Trav14d-3-dv8A0A075B619 120 aa12□□□□□ -0.49
Hoxc4-202ENSMUST00000165375 TeppQ6IMH0 216 aa12□□□□□ -0.49
Hoxc4-202ENSMUST00000165375 Q99M08 65 aa12□□□□□ -0.49
Hoxc4-202ENSMUST00000165375 E130114P18RikF6S0S7 154 aa11.99□□□□□ -0.49
Hoxc4-202ENSMUST00000165375 Krtap16-1A2A5X5 502 aa11.99□□□□□ -0.49
Hoxc4-202ENSMUST00000165375 GfyJ3KML8 504 aa11.99□□□□□ -0.49
Hoxc4-202ENSMUST00000165375 Spry2Q9QXV8 315 aa11.99□□□□□ -0.49
Hoxc4-202ENSMUST00000165375 Rps28P62858 69 aaKnown RBP11.98□□□□□ -0.49
Hoxc4-202ENSMUST00000165375 Mrpl52Q9D0Y8 121 aa11.98□□□□□ -0.49
Hoxc4-202ENSMUST00000165375 Ighv1-11A0A0A6YWI9 117 aa11.98□□□□□ -0.49
Hoxc4-202ENSMUST00000165375 Fxyd5P97808 178 aa11.98□□□□□ -0.49
Hoxc4-202ENSMUST00000165375 Cmc4Q61908 68 aa11.98□□□□□ -0.49
Hoxc4-202ENSMUST00000165375 Gm20730A0A075B5J6 119 aa11.97□□□□□ -0.49
Hoxc4-202ENSMUST00000165375 Eif4ebp3Q80VV3 101 aa11.97□□□□□ -0.49
Hoxc4-202ENSMUST00000165375 Gm17472A0A075B683 117 aa11.96□□□□□ -0.49
Hoxc4-202ENSMUST00000165375 MalO09198 153 aa11.96□□□□□ -0.49
Hoxc4-202ENSMUST00000165375 HampQ9EQ21 83 aa11.96□□□□□ -0.49
Hoxc4-202ENSMUST00000165375 OdaphJ3QNT8 126 aa11.96□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 99.5 ms