RNA–Protein interactions for RNA: ENSMUST00000160369.7

Ercc1-203, Transcript of DNA excision repair protein ERCC-1, mousemouse

TSL 1 (best) BASIC

Gene Ercc1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-203ENSMUST00000160369 Igkv3-12A0A140T8P0 119 aa9.13□□□□□ -0.95
Ercc1-203ENSMUST00000160369 4930546C10RikE9Q4Y3 121 aa9.13□□□□□ -0.95
Ercc1-203ENSMUST00000160369 Esp34G3UXG0 151 aa9.13□□□□□ -0.95
Ercc1-203ENSMUST00000160369 Prp2P05143 317 aa9.13□□□□□ -0.95
Ercc1-203ENSMUST00000160369 Ndufa12Q7TMF3 145 aaKnown RBP9.13□□□□□ -0.95
Ercc1-203ENSMUST00000160369 Mrps10Q80ZK0 160 aaKnown RBP9.13□□□□□ -0.95
Ercc1-203ENSMUST00000160369 Tfpi2O35536 230 aa9.12□□□□□ -0.95
Ercc1-203ENSMUST00000160369 SeboxP70368 190 aa9.12□□□□□ -0.95
Ercc1-203ENSMUST00000160369 Dnah2P0C6F1 4456 aa9.11□□□□□ -0.95
Ercc1-203ENSMUST00000160369 Ighv2-9A0A075B5Q5 116 aa9.11□□□□□ -0.95
Ercc1-203ENSMUST00000160369 P01896 185 aa9.11□□□□□ -0.95
Ercc1-203ENSMUST00000160369 Hist1h2bmP10854 126 aa9.11□□□□□ -0.95
Ercc1-203ENSMUST00000160369 PlnP61014 52 aa9.11□□□□□ -0.95
Ercc1-203ENSMUST00000160369 Hist1h2bhQ64478 126 aa9.11□□□□□ -0.95
Ercc1-203ENSMUST00000160369 Hist2h2bbQ64525 126 aa9.11□□□□□ -0.95
Ercc1-203ENSMUST00000160369 Hist1h2bcQ6ZWY9 126 aaKnown RBP9.11□□□□□ -0.95
Ercc1-203ENSMUST00000160369 SpinklQ8CEK3 90 aa9.11□□□□□ -0.95
Ercc1-203ENSMUST00000160369 Dnah11E9Q7N9 4488 aa9.11□□□□□ -0.95
Ercc1-203ENSMUST00000160369 CnbpP53996 178 aaKnown RBP9.1□□□□□ -0.95
Ercc1-203ENSMUST00000160369 Ube2d1P61080 147 aaKnown RBP9.1□□□□□ -0.95
Ercc1-203ENSMUST00000160369 Timm10bQ9WV96 100 aa9.1□□□□□ -0.95
Ercc1-203ENSMUST00000160369 Defa16P50714 93 aa9.09□□□□□ -0.95
Ercc1-203ENSMUST00000160369 Cib3Q0P523 160 aa9.09□□□□□ -0.95
Ercc1-203ENSMUST00000160369 Sprr1bQ62267 153 aa9.09□□□□□ -0.95
Ercc1-203ENSMUST00000160369 9430069I07RikQ9CX21 111 aa9.09□□□□□ -0.95
Ercc1-203ENSMUST00000160369 Ss18l2Q9D174 77 aa9.09□□□□□ -0.95
Ercc1-203ENSMUST00000160369 3110070M22RikQ9DAQ7 118 aa9.09□□□□□ -0.95
Ercc1-203ENSMUST00000160369 Plpp2Q9DAX2 276 aa9.09□□□□□ -0.95
Ercc1-203ENSMUST00000160369 Gm45521A0A1B0GRK0 198 aa9.08□□□□□ -0.96
Ercc1-203ENSMUST00000160369 Gm10542F6XDR3 90 aa9.08□□□□□ -0.96
Ercc1-203ENSMUST00000160369 Fgf6P21658 208 aa9.08□□□□□ -0.96
Ercc1-203ENSMUST00000160369 Tmem170bP86050 132 aa9.08□□□□□ -0.96
Ercc1-203ENSMUST00000160369 Gm10837Q3UTT8 145 aa9.08□□□□□ -0.96
Ercc1-203ENSMUST00000160369 BC106179Q8C9L1 186 aa9.08□□□□□ -0.96
Ercc1-203ENSMUST00000160369 Gm2696A0A1W2P709 240 aa9.07□□□□□ -0.96
Ercc1-203ENSMUST00000160369 Aqp7O54794 303 aa9.07□□□□□ -0.96
Ercc1-203ENSMUST00000160369 Prss58Q8BW11 241 aa9.07□□□□□ -0.96
Ercc1-203ENSMUST00000160369 Tmem97Q8VD00 176 aa9.07□□□□□ -0.96
Ercc1-203ENSMUST00000160369 SmagpQ99KC7 97 aa9.07□□□□□ -0.96
Ercc1-203ENSMUST00000160369 Igkv4-92A0A0B4J1I2 117 aa9.06□□□□□ -0.96
Ercc1-203ENSMUST00000160369 Ube2wQ8VDW4 151 aa9.06□□□□□ -0.96
Ercc1-203ENSMUST00000160369 Stard4Q99JV5 224 aa9.06□□□□□ -0.96
Ercc1-203ENSMUST00000160369 1700012A03RikQ9DAF1 130 aa9.06□□□□□ -0.96
Ercc1-203ENSMUST00000160369 Trav13d-4A0A0G2JFX3 110 aa9.05□□□□□ -0.96
Ercc1-203ENSMUST00000160369 Srsf9Q9D0B0 222 aaKnown RBP9.05□□□□□ -0.96
Ercc1-203ENSMUST00000160369 S100a1P56565 94 aa9.04□□□□□ -0.96
Ercc1-203ENSMUST00000160369 Ovol2Q8CIV7 274 aa9.04□□□□□ -0.96
Ercc1-203ENSMUST00000160369 Esp24A8R0V6 68 aa9.03□□□□□ -0.96
Ercc1-203ENSMUST00000160369 Gm1968Q3T9I3 115 aa9.03□□□□□ -0.96
Ercc1-203ENSMUST00000160369 Gm10735Q3US96 136 aa9.03□□□□□ -0.96
Ercc1-203ENSMUST00000160369 Trav13-4-dv7A0A075B6C2 110 aa9.02□□□□□ -0.97
Ercc1-203ENSMUST00000160369 NpyP57774 97 aa9.02□□□□□ -0.97
Ercc1-203ENSMUST00000160369 Gm1553Q66VB7 94 aa9.02□□□□□ -0.97
Ercc1-203ENSMUST00000160369 4930519P11RikQ9CUJ8 166 aa9.02□□□□□ -0.97
Ercc1-203ENSMUST00000160369 Igkv2-137A0A0B4J1H6 120 aa9.01□□□□□ -0.97
Ercc1-203ENSMUST00000160369 PkigO70139 76 aa9.01□□□□□ -0.97
Ercc1-203ENSMUST00000160369 Gm10842Q3U587 122 aa9.01□□□□□ -0.97
Ercc1-203ENSMUST00000160369 Chac1Q8R3J5 223 aa9.01□□□□□ -0.97
Ercc1-203ENSMUST00000160369 Cox7b2Q9D2H1 82 aa9.01□□□□□ -0.97
Ercc1-203ENSMUST00000160369 Ankrd39Q9D2X0 183 aa9.01□□□□□ -0.97
Ercc1-203ENSMUST00000160369 RetnlaQ9EP95 111 aa9.01□□□□□ -0.97
Ercc1-203ENSMUST00000160369 Igkv3-2A0A075B5P0 119 aa9□□□□□ -0.97
Ercc1-203ENSMUST00000160369 Cox8cA6H666 72 aa9□□□□□ -0.97
Ercc1-203ENSMUST00000160369 Cited1P97769 203 aa9□□□□□ -0.97
Ercc1-203ENSMUST00000160369 Mfap4Q9D1H9 257 aa9□□□□□ -0.97
Ercc1-203ENSMUST00000160369 Josd1Q9DBJ6 202 aa9□□□□□ -0.97
Ercc1-203ENSMUST00000160369 Stard9Q80TF6 4561 aa9□□□□□ -0.97
Ercc1-203ENSMUST00000160369 Dync1h1Q9JHU4 4644 aaKnown RBP9□□□□□ -0.97
Ercc1-203ENSMUST00000160369 Gm10130F6ZHM5 101 aa8.99□□□□□ -0.97
Ercc1-203ENSMUST00000160369 Tmem86bQ497J1 226 aa8.98□□□□□ -0.97
Ercc1-203ENSMUST00000160369 Mpv17l2Q8VIK2 200 aa8.98□□□□□ -0.97
Ercc1-203ENSMUST00000160369 Rbm7Q9CQT2 265 aaKnown RBP8.98□□□□□ -0.97
Ercc1-203ENSMUST00000160369 Psmb2Q9R1P3 201 aa8.98□□□□□ -0.97
Ercc1-203ENSMUST00000160369 Dnah5Q8VHE6 4621 aa8.97□□□□□ -0.97
Ercc1-203ENSMUST00000160369 Igkv8-24A0A140T8P5 121 aa8.97□□□□□ -0.97
Ercc1-203ENSMUST00000160369 SpxD3Z752 116 aa8.97□□□□□ -0.97
Ercc1-203ENSMUST00000160369 Tomm6Q9CQN3 74 aa8.97□□□□□ -0.97
Ercc1-203ENSMUST00000160369 Ighv1-56A0A0A6YXG2 117 aa8.96□□□□□ -0.98
Ercc1-203ENSMUST00000160369 Tcrg-V4A0A0B4J1J8 138 aa8.96□□□□□ -0.98
Ercc1-203ENSMUST00000160369 Gm45717A0A1B0GT68 152 aa8.96□□□□□ -0.98
Ercc1-203ENSMUST00000160369 Fam104aA2A6P4 185 aa8.96□□□□□ -0.98
Ercc1-203ENSMUST00000160369 P01794 123 aa8.96□□□□□ -0.98
Ercc1-203ENSMUST00000160369 P18527 97 aa8.96□□□□□ -0.98
Ercc1-203ENSMUST00000160369 Defa9P50707 93 aa8.96□□□□□ -0.98
Ercc1-203ENSMUST00000160369 Cks1bP61025 79 aa8.96□□□□□ -0.98
Ercc1-203ENSMUST00000160369 Bsph2Q0Q236 131 aa8.96□□□□□ -0.98
Ercc1-203ENSMUST00000160369 Q9D727 114 aa8.96□□□□□ -0.98
Ercc1-203ENSMUST00000160369 Zfand2aQ9JII7 171 aa8.96□□□□□ -0.98
Ercc1-203ENSMUST00000160369 Trav11A0A0B4J1J9 114 aa8.95□□□□□ -0.98
Ercc1-203ENSMUST00000160369 Krtap13O88375 197 aa8.95□□□□□ -0.98
Ercc1-203ENSMUST00000160369 LeprotO89013 131 aa8.95□□□□□ -0.98
Ercc1-203ENSMUST00000160369 Ighv1-62-1A0A075B5U3 116 aa8.94□□□□□ -0.98
Ercc1-203ENSMUST00000160369 Vamp3P63024 103 aa8.94□□□□□ -0.98
Ercc1-203ENSMUST00000160369 Camk2n2Q78WH7 79 aa8.94□□□□□ -0.98
Ercc1-203ENSMUST00000160369 BB014433Q8C5R5 389 aa8.94□□□□□ -0.98
Ercc1-203ENSMUST00000160369 Sprr4Q8CGN8 76 aa8.94□□□□□ -0.98
Ercc1-203ENSMUST00000160369 Hspb8Q9JK92 196 aa8.94□□□□□ -0.98
Ercc1-203ENSMUST00000160369 Gm10065F6TJM2 114 aa8.93□□□□□ -0.98
Ercc1-203ENSMUST00000160369 SycnQ8VCK7 134 aa8.93□□□□□ -0.98
Ercc1-203ENSMUST00000160369 Fam213bQ9DB60 201 aa8.93□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 66.5 ms