RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 Gm9922Q8C3P1 144 aa5.49□□□□□ -1.53
Usp40-204ENSMUST00000187758 CrygfQ9CXV3 174 aa5.49□□□□□ -1.53
Usp40-204ENSMUST00000187758 Klf13Q9JJZ6 289 aa5.49□□□□□ -1.53
Usp40-204ENSMUST00000187758 Trav8-1A0A075B641 109 aa5.49□□□□□ -1.53
Usp40-204ENSMUST00000187758 Rpl13aP19253 203 aaKnown RBP5.49□□□□□ -1.53
Usp40-204ENSMUST00000187758 Tmem136Q3TYE7 245 aa5.49□□□□□ -1.53
Usp40-204ENSMUST00000187758 Arhgap32Q811P8 2089 aa5.49□□□□□ -1.53
Usp40-204ENSMUST00000187758 1520401A03RikA0A0J9YVH6 598 aa5.49□□□□□ -1.53
Usp40-204ENSMUST00000187758 Gm20517G3UVU6 152 aa5.49□□□□□ -1.53
Usp40-204ENSMUST00000187758 P01791 123 aa5.49□□□□□ -1.53
Usp40-204ENSMUST00000187758 AngP21570 145 aa5.49□□□□□ -1.53
Usp40-204ENSMUST00000187758 Foxi1Q922I5 372 aa5.49□□□□□ -1.53
Usp40-204ENSMUST00000187758 Tmem14cQ9CQN6 114 aa5.49□□□□□ -1.53
Usp40-204ENSMUST00000187758 Cryba4Q9JJV0 196 aa5.49□□□□□ -1.53
Usp40-204ENSMUST00000187758 Hivep3A2A884 2348 aa5.49□□□□□ -1.53
Usp40-204ENSMUST00000187758 Igkv4-74A0A0B4J1I3 119 aa5.48□□□□□ -1.53
Usp40-204ENSMUST00000187758 Gm20499D3Z4G5 72 aa5.48□□□□□ -1.53
Usp40-204ENSMUST00000187758 Spag11Q8K4N2 71 aa5.48□□□□□ -1.53
Usp40-204ENSMUST00000187758 Iah1Q9DB29 249 aa5.48□□□□□ -1.53
Usp40-204ENSMUST00000187758 Scgb1b2O35176 93 aa5.48□□□□□ -1.53
Usp40-204ENSMUST00000187758 Gm815Q3UWS2 115 aa5.48□□□□□ -1.53
Usp40-204ENSMUST00000187758 Map1lc3aQ91VR7 121 aa5.48□□□□□ -1.53
Usp40-204ENSMUST00000187758 Gpx7Q99LJ6 186 aa5.48□□□□□ -1.53
Usp40-204ENSMUST00000187758 Slc25a20Q9Z2Z6 301 aaKnown RBP5.48□□□□□ -1.53
Usp40-204ENSMUST00000187758 Gm867A0A1W2P7T4 151 aa5.48□□□□□ -1.53
Usp40-204ENSMUST00000187758 Esp24A8R0V6 68 aa5.48□□□□□ -1.53
Usp40-204ENSMUST00000187758 Gm17732E9Q5I2 61 aa5.48□□□□□ -1.53
Usp40-204ENSMUST00000187758 Cks1brtQ3UNC9 96 aa5.48□□□□□ -1.53
Usp40-204ENSMUST00000187758 PdpnQ62011 172 aa5.48□□□□□ -1.53
Usp40-204ENSMUST00000187758 Defb42Q8BVB5 75 aa5.48□□□□□ -1.53
Usp40-204ENSMUST00000187758 Rnf185Q91YT2 192 aa5.48□□□□□ -1.53
Usp40-204ENSMUST00000187758 Dkk2Q9QYZ8 259 aa5.48□□□□□ -1.53
Usp40-204ENSMUST00000187758 Tex15F8VPN2 2785 aa5.48□□□□□ -1.53
Usp40-204ENSMUST00000187758 Esp3J3QN49 87 aa5.48□□□□□ -1.53
Usp40-204ENSMUST00000187758 P01738 130 aa5.48□□□□□ -1.53
Usp40-204ENSMUST00000187758 P06334 169 aa5.48□□□□□ -1.53
Usp40-204ENSMUST00000187758 Cox7cP17665 63 aa5.48□□□□□ -1.53
Usp40-204ENSMUST00000187758 Notch2O35516 2470 aa5.47□□□□□ -1.53
Usp40-204ENSMUST00000187758 BC107364E9Q5A2 140 aa5.47□□□□□ -1.53
Usp40-204ENSMUST00000187758 Gm10271F6WY25 52 aa5.47□□□□□ -1.53
Usp40-204ENSMUST00000187758 AI854703Q8BIN3 203 aa5.47□□□□□ -1.53
Usp40-204ENSMUST00000187758 Lypd5Q9D7Z7 256 aa5.47□□□□□ -1.53
Usp40-204ENSMUST00000187758 Trbv16A0A0B4J1H3 115 aa5.47□□□□□ -1.53
Usp40-204ENSMUST00000187758 Mrps12O35680 139 aa5.47□□□□□ -1.53
Usp40-204ENSMUST00000187758 CrxO54751 299 aa5.47□□□□□ -1.53
Usp40-204ENSMUST00000187758 C1qcQ02105 246 aa5.47□□□□□ -1.53
Usp40-204ENSMUST00000187758 NrepQ07475 68 aa5.47□□□□□ -1.53
Usp40-204ENSMUST00000187758 Mrpl35Q9CQL6 188 aa5.47□□□□□ -1.53
Usp40-204ENSMUST00000187758 8030423J24RikQ9CX45 142 aa5.47□□□□□ -1.53
Usp40-204ENSMUST00000187758 Q9D131 166 aa5.47□□□□□ -1.53
Usp40-204ENSMUST00000187758 Gnb1lQ9EQ15 326 aa5.47□□□□□ -1.53
Usp40-204ENSMUST00000187758 Ighv6-7A0A0A6YWU3 119 aa5.47□□□□□ -1.53
Usp40-204ENSMUST00000187758 Gm45717A0A1B0GT68 152 aa5.47□□□□□ -1.53
Usp40-204ENSMUST00000187758 Gm6040Q4QY32 63 aa5.47□□□□□ -1.53
Usp40-204ENSMUST00000187758 Wfdc17Q5SSJ1 76 aa5.47□□□□□ -1.53
Usp40-204ENSMUST00000187758 Tomm6Q9CQN3 74 aa5.47□□□□□ -1.53
Usp40-204ENSMUST00000187758 1500011B03RikQ3TTH7 73 aa5.46□□□□□ -1.53
Usp40-204ENSMUST00000187758 Q99M08 65 aa5.46□□□□□ -1.53
Usp40-204ENSMUST00000187758 Igkv4-68A0A0B4J1I7 117 aa5.46□□□□□ -1.54
Usp40-204ENSMUST00000187758 Olfr313Q5NC55 308 aa5.46□□□□□ -1.54
Usp40-204ENSMUST00000187758 Spata3Q9D9T6 193 aa5.46□□□□□ -1.54
Usp40-204ENSMUST00000187758 Trav14n-2A0A0G2JDF5 121 aa5.46□□□□□ -1.54
Usp40-204ENSMUST00000187758 Csn3P06796 181 aa5.46□□□□□ -1.54
Usp40-204ENSMUST00000187758 Trav7d-3Q5R1I1 112 aa5.46□□□□□ -1.54
Usp40-204ENSMUST00000187758 AamdcQ8R0P4 122 aa5.46□□□□□ -1.54
Usp40-204ENSMUST00000187758 Q9D8Q6 235 aa5.46□□□□□ -1.54
Usp40-204ENSMUST00000187758 Xirp2Q4U4S6 3784 aa5.46□□□□□ -1.54
Usp40-204ENSMUST00000187758 PolqQ8CGS6 2544 aa5.45□□□□□ -1.54
Usp40-204ENSMUST00000187758 Gm29289A0A087WPY7 166 aa5.45□□□□□ -1.54
Usp40-204ENSMUST00000187758 Trav9n-2A0A0G2JDP3 113 aa5.45□□□□□ -1.54
Usp40-204ENSMUST00000187758 CrygdP04342 174 aa5.45□□□□□ -1.54
Usp40-204ENSMUST00000187758 PlnP61014 52 aa5.45□□□□□ -1.54
Usp40-204ENSMUST00000187758 CrygeQ03740 174 aa5.45□□□□□ -1.54
Usp40-204ENSMUST00000187758 Gm21370Q3T9V6 190 aa5.45□□□□□ -1.54
Usp40-204ENSMUST00000187758 Gm4064A0A087WR82 380 aa5.45□□□□□ -1.54
Usp40-204ENSMUST00000187758 Gm10352B2RWR6 380 aa5.45□□□□□ -1.54
Usp40-204ENSMUST00000187758 Gm10490F6VBM2 120 aa5.45□□□□□ -1.54
Usp40-204ENSMUST00000187758 GfyJ3KML8 504 aa5.45□□□□□ -1.54
Usp40-204ENSMUST00000187758 Gm21693J3QK27 380 aa5.45□□□□□ -1.54
Usp40-204ENSMUST00000187758 Rbmy1a1O35698 380 aa5.45□□□□□ -1.54
Usp40-204ENSMUST00000187758 Crip2Q9DCT8 208 aaKnown RBP5.45□□□□□ -1.54
Usp40-204ENSMUST00000187758 Tcf24V9GWT9 166 aa5.45□□□□□ -1.54
Usp40-204ENSMUST00000187758 Ighv1-66A0A075B5X5 117 aa5.45□□□□□ -1.54
Usp40-204ENSMUST00000187758 Cmc4Q61908 68 aa5.44□□□□□ -1.54
Usp40-204ENSMUST00000187758 Srsf9Q9D0B0 222 aaKnown RBP5.44□□□□□ -1.54
Usp40-204ENSMUST00000187758 Notch3Q61982 2318 aa5.44□□□□□ -1.54
Usp40-204ENSMUST00000187758 Hbb-bsA8DUK4 147 aa5.44□□□□□ -1.54
Usp40-204ENSMUST00000187758 Hbb-b1P02088 147 aa5.44□□□□□ -1.54
Usp40-204ENSMUST00000187758 Gm10604Q3V0X7 143 aa5.44□□□□□ -1.54
Usp40-204ENSMUST00000187758 Tal2Q62282 108 aa5.44□□□□□ -1.54
Usp40-204ENSMUST00000187758 Prss29Q99MS4 279 aa5.44□□□□□ -1.54
Usp40-204ENSMUST00000187758 PmvkQ9D1G2 192 aa5.44□□□□□ -1.54
Usp40-204ENSMUST00000187758 Col6a5A6H584 2640 aa5.44□□□□□ -1.54
Usp40-204ENSMUST00000187758 Fxyd5P97808 178 aa5.44□□□□□ -1.54
Usp40-204ENSMUST00000187758 E130114P18RikF6S0S7 154 aa5.43□□□□□ -1.54
Usp40-204ENSMUST00000187758 Egr2P08152 470 aa5.43□□□□□ -1.54
Usp40-204ENSMUST00000187758 Gm14137Q8CE97 175 aa5.43□□□□□ -1.54
Usp40-204ENSMUST00000187758 Q8R092 253 aa5.43□□□□□ -1.54
Usp40-204ENSMUST00000187758 Fam240aJ3QNP9 97 aa5.43□□□□□ -1.54
Usp40-204ENSMUST00000187758 Pglyrp1O88593 182 aa5.43□□□□□ -1.54
Retrieved 100 of 22,080 RNA–protein pairs in 58.5 ms