RNA–Protein interactions for RNA: YPR054W

SMK1, Transcript of Middle sporulation-specific mitogen-activated protein kinase (MAPK), yeastyeast

Gene SMK1, Length 1,167 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMK1YPR054W YMR111CQ04461 462 aaPredicted RBP6.93□□□□□ -1.3
SMK1YPR054W COQ9Q05779 260 aa6.93□□□□□ -1.3
SMK1YPR054W SGO1Q08490 590 aa6.93□□□□□ -1.3
SMK1YPR054W DSE3Q08729 430 aa6.93□□□□□ -1.3
SMK1YPR054W EMP46Q12396 444 aa6.93□□□□□ -1.3
SMK1YPR054W SPE4Q12455 300 aa6.93□□□□□ -1.3
SMK1YPR054W VPS5Q92331 675 aa6.93□□□□□ -1.3
SMK1YPR054W MYO1P08964 1928 aa6.93□□□□□ -1.3
SMK1YPR054W FLO11P08640 1367 aa6.93□□□□□ -1.3
SMK1YPR054W MRP10O75012 95 aa6.92□□□□□ -1.3
SMK1YPR054W ATP2P00830 511 aaKnown RBP6.92□□□□□ -1.3
SMK1YPR054W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.92□□□□□ -1.3not detected
SMK1YPR054W CTT1P06115 562 aa6.92□□□□□ -1.3
SMK1YPR054W HIS3P06633 220 aa6.92□□□□□ -1.3
SMK1YPR054W SNF1P06782 633 aaKnown RBP6.92□□□□□ -1.3
SMK1YPR054W MSH2P25847 964 aa6.92□□□□□ -1.3
SMK1YPR054W ACH1P32316 526 aa6.92□□□□□ -1.3
SMK1YPR054W DBF4P32325 704 aa6.92□□□□□ -1.3
SMK1YPR054W PIM1P36775 1133 aa6.92□□□□□ -1.3
SMK1YPR054W YHR112CP38716 378 aa6.92□□□□□ -1.3
SMK1YPR054W GOS1P38736 223 aa6.92□□□□□ -1.3
SMK1YPR054W SSZ1P38788 538 aaKnown RBP6.92□□□□□ -1.3
SMK1YPR054W UTP9P38882 575 aaKnown RBP6.92□□□□□ -1.3
SMK1YPR054W SAD1P43589 448 aa6.92□□□□□ -1.3
SMK1YPR054W IRC5P43610 853 aa6.92□□□□□ -1.3
SMK1YPR054W ECL1P48235 211 aa6.92□□□□□ -1.3
SMK1YPR054W PSP1P50896 841 aaKnown RBP6.92□□□□□ -1.3
SMK1YPR054W NUP84P52891 726 aa6.92□□□□□ -1.3
SMK1YPR054W GUP1P53154 560 aa6.92□□□□□ -1.3
SMK1YPR054W YTP1P53584 459 aa6.92□□□□□ -1.3
SMK1YPR054W BNI5P53890 448 aaKnown RBP6.92□□□□□ -1.3
SMK1YPR054W SED5Q01590 340 aa6.92□□□□□ -1.3
SMK1YPR054W ADI1Q03677 179 aa6.92□□□□□ -1.3
SMK1YPR054W TDA6Q06466 467 aa6.92□□□□□ -1.3
SMK1YPR054W RRP9Q06506 573 aaKnown RBP6.92□□□□□ -1.3
SMK1YPR054W ASA1Q06822 443 aa6.92□□□□□ -1.3
SMK1YPR054W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.92□□□□□ -1.3not detected
SMK1YPR054W MCH5Q08777 521 aa6.92□□□□□ -1.3
SMK1YPR054W TRE1Q08919 783 aa6.92□□□□□ -1.3
SMK1YPR054W RRD2Q12461 358 aa6.92□□□□□ -1.3
SMK1YPR054W YBL113CQ7M4S9 792 aa6.92□□□□□ -1.3
SMK1YPR054W COR1P07256 457 aa6.91□□□□□ -1.3
SMK1YPR054W HSC82P15108 705 aaKnown RBP6.91□□□□□ -1.3
SMK1YPR054W PRP6P19735 899 aaPredicted RBP6.91□□□□□ -1.3
SMK1YPR054W HSP60P19882 572 aaKnown RBP6.91□□□□□ -1.3
SMK1YPR054W SFL1P20134 766 aa6.91□□□□□ -1.3
SMK1YPR054W RET1P22276 1149 aaKnown RBP6.91□□□□□ -1.3
SMK1YPR054W SAN1P22470 610 aa6.91□□□□□ -1.3
SMK1YPR054W CAD1P24813 409 aaKnown RBP6.91□□□□□ -1.3
SMK1YPR054W VPS21P36017 210 aaKnown RBP6.91□□□□□ -1.3
SMK1YPR054W DUG2P38149 878 aa6.91□□□□□ -1.3
SMK1YPR054W TOS1P38288 455 aa6.91□□□□□ -1.3
SMK1YPR054W EXO5P38289 585 aa6.91□□□□□ -1.3
SMK1YPR054W NAB3P38996 802 aaKnown RBP RIP-Chip data6.91□□□□□ -1.3not detected
SMK1YPR054W YJL107CP42947 387 aa6.91□□□□□ -1.3
SMK1YPR054W TY4A-JP47023 414 aa6.91□□□□□ -1.3
SMK1YPR054W COS5P47187 383 aa6.91□□□□□ -1.3
SMK1YPR054W COG2P53271 262 aa6.91□□□□□ -1.3
SMK1YPR054W UTP8P53276 713 aaKnown RBP6.91□□□□□ -1.3
SMK1YPR054W BIO4P53630 237 aa6.91□□□□□ -1.3
SMK1YPR054W DML1Q03652 475 aa6.91□□□□□ -1.3
SMK1YPR054W CSM3Q04659 317 aa6.91□□□□□ -1.3
SMK1YPR054W ARP9Q05123 467 aa6.91□□□□□ -1.3
SMK1YPR054W YDL057WQ07379 328 aa6.91□□□□□ -1.3
SMK1YPR054W GPI13Q07830 1017 aa6.91□□□□□ -1.3
SMK1YPR054W TMA46Q12000 345 aaKnown RBP6.91□□□□□ -1.3
SMK1YPR054W ADF1Q2V2Q1 113 aa6.91□□□□□ -1.3
SMK1YPR054W MF(ALPHA)1P01149 165 aa6.9□□□□□ -1.3
SMK1YPR054W RPP1AP05318 106 aaPredicted RBP6.9□□□□□ -1.3
SMK1YPR054W IDI1P15496 288 aa6.9□□□□□ -1.3
SMK1YPR054W MGT1P26188 188 aa6.9□□□□□ -1.3
SMK1YPR054W YJU2P28320 278 aaPredicted RBP6.9□□□□□ -1.3
SMK1YPR054W TFB1P32776 642 aa6.9□□□□□ -1.3
SMK1YPR054W YSC84P32793 468 aa6.9□□□□□ -1.3
SMK1YPR054W ETR1P38071 380 aa6.9□□□□□ -1.3
SMK1YPR054W KAP104P38217 918 aaKnown RBP6.9□□□□□ -1.3
SMK1YPR054W SMF2P38778 549 aa6.9□□□□□ -1.3
SMK1YPR054W GGA2P38817 585 aaKnown RBP6.9□□□□□ -1.3
SMK1YPR054W FTR1P40088 404 aa6.9□□□□□ -1.3
SMK1YPR054W YER156CP40093 338 aaKnown RBP6.9□□□□□ -1.3
SMK1YPR054W NUP82P40368 713 aa6.9□□□□□ -1.3
SMK1YPR054W UBP7P40453 1071 aa6.9□□□□□ -1.3
SMK1YPR054W RGD2P43556 714 aa6.9□□□□□ -1.3
SMK1YPR054W RSM26P47141 266 aa6.9□□□□□ -1.3
SMK1YPR054W ORC3P54790 616 aa6.9□□□□□ -1.3
SMK1YPR054W SLU7Q02775 382 aaKnown RBP6.9□□□□□ -1.3
SMK1YPR054W SEN54Q02825 467 aaPredicted RBP6.9□□□□□ -1.3
SMK1YPR054W HEH2Q03281 663 aa6.9□□□□□ -1.3
SMK1YPR054W CLU1Q03690 1277 aaKnown RBP6.9□□□□□ -1.3
SMK1YPR054W FUS2Q05670 677 aa6.9□□□□□ -1.3
SMK1YPR054W THI3Q07471 609 aa6.9□□□□□ -1.3
SMK1YPR054W MNL2Q12205 849 aa6.9□□□□□ -1.3
SMK1YPR054W HRT3Q12347 344 aa6.9□□□□□ -1.3
SMK1YPR054W ILS1P09436 1072 aaKnown RBP6.89□□□□□ -1.31
SMK1YPR054W HMG2P12684 1045 aa6.89□□□□□ -1.31
SMK1YPR054W VPS34P22543 875 aa6.89□□□□□ -1.31
SMK1YPR054W GFD2P25370 566 aaKnown RBP6.89□□□□□ -1.31
SMK1YPR054W RPL8BP29453 256 aaKnown RBP6.89□□□□□ -1.31
SMK1YPR054W ZIP1P31111 875 aa6.89□□□□□ -1.31
SMK1YPR054W PEX2P32800 271 aa6.89□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms