RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeast

Gene SSU72, Length 621 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSU72	YNL222W	YML053C	Q04978	212 aa		4.92	□□□□□ -1.62
SSU72	YNL222W	CTT1	P06115	562 aa		4.91	□□□□□ -1.62
SSU72	YNL222W	YMR085W	P0CF18	432 aa		4.91	□□□□□ -1.62
SSU72	YNL222W	TAF5	P38129	798 aa		4.91	□□□□□ -1.62
SSU72	YNL222W	SWD1	P39706	426 aa		4.91	□□□□□ -1.62
SSU72	YNL222W	SAP1	P39955	897 aa	Known RBP	4.91	□□□□□ -1.62
SSU72	YNL222W	LAS21	P40367	830 aa		4.91	□□□□□ -1.62
SSU72	YNL222W	ASK10	P48361	1146 aa		4.91	□□□□□ -1.62
SSU72	YNL222W	IDP3	P53982	420 aa	Known RBP	4.91	□□□□□ -1.62
SSU72	YNL222W	TGL2	P54857	326 aa		4.91	□□□□□ -1.62
SSU72	YNL222W	CEG1	Q01159	459 aa	Predicted RBP	4.91	□□□□□ -1.62
SSU72	YNL222W	CRF1	Q04930	467 aa		4.91	□□□□□ -1.62
SSU72	YNL222W	YDL242W	Q07746	117 aa		4.91	□□□□□ -1.62
SSU72	YNL222W	LCB4	Q12246	624 aa		4.91	□□□□□ -1.62
SSU72	YNL222W	RTC1	Q08281	1341 aa		4.91	□□□□□ -1.62
SSU72	YNL222W	YLF2	P38746	405 aa		4.9	□□□□□ -1.63
SSU72	YNL222W	RRP8	P38961	392 aa	Known RBP	4.9	□□□□□ -1.63
SSU72	YNL222W	ARB1	P40024	610 aa	Known RBP	4.9	□□□□□ -1.63
SSU72	YNL222W	SND1	Q04007	877 aa		4.9	□□□□□ -1.63
SSU72	YNL222W	PLM2	Q04383	521 aa		4.9	□□□□□ -1.63
SSU72	YNL222W	GEP3	Q08622	556 aa		4.9	□□□□□ -1.63
SSU72	YNL222W	MPD2	Q99316	277 aa		4.9	□□□□□ -1.63
SSU72	YNL222W	YAP1	P19880	650 aa	Known RBP	4.89	□□□□□ -1.63
SSU72	YNL222W	MPS1	P54199	764 aa		4.89	□□□□□ -1.63
SSU72	YNL222W	CRC1	Q12289	327 aa		4.89	□□□□□ -1.63
SSU72	YNL222W	FTH1	P38310	465 aa		4.88	□□□□□ -1.63
SSU72	YNL222W	IMD2	P38697	523 aa	Known RBP	4.88	□□□□□ -1.63
SSU72	YNL222W	CIR1	P42940	261 aa		4.88	□□□□□ -1.63
SSU72	YNL222W	IMD3	P50095	523 aa	Known RBP	4.88	□□□□□ -1.63
SSU72	YNL222W	AAT1	Q01802	451 aa		4.88	□□□□□ -1.63
SSU72	YNL222W	SNU56	Q03782	492 aa	Known RBP	4.88	□□□□□ -1.63
SSU72	YNL222W	AAD4	Q07747	329 aa		4.88	□□□□□ -1.63
SSU72	YNL222W	NIC96	P34077	839 aa		4.87	□□□□□ -1.63
SSU72	YNL222W	VPS64	Q03944	604 aa		4.87	□□□□□ -1.63
SSU72	YNL222W	RAD34	Q06665	692 aa		4.87	□□□□□ -1.63
SSU72	YNL222W	CRD1	Q07560	283 aa		4.87	□□□□□ -1.63
SSU72	YNL222W	YOR389W	Q08912	624 aa		4.87	□□□□□ -1.63
SSU72	YNL222W	ARP7	Q12406	477 aa		4.87	□□□□□ -1.63
SSU72	YNL222W	KES1	P35844	434 aa	Known RBP	4.86	□□□□□ -1.63
SSU72	YNL222W	IRC7	P43623	340 aa		4.86	□□□□□ -1.63
SSU72	YNL222W	PEX8	P53248	589 aa		4.86	□□□□□ -1.63
SSU72	YNL222W	ESF2	P53743	316 aa	Known RBP	4.86	□□□□□ -1.63
SSU72	YNL222W	MAK32	P23060	363 aa		4.85	□□□□□ -1.63
SSU72	YNL222W	JHD1	P40034	492 aa		4.85	□□□□□ -1.63
SSU72	YNL222W	YIL024C	P40543	189 aa		4.85	□□□□□ -1.63
SSU72	YNL222W	MNT3	P40549	630 aa		4.85	□□□□□ -1.63
SSU72	YNL222W	MAD3	P47074	515 aa		4.85	□□□□□ -1.63
SSU72	YNL222W	CET1	O13297	549 aa	Predicted RBP	4.84	□□□□□ -1.63
SSU72	YNL222W	SES1	P07284	462 aa	Known RBP	4.84	□□□□□ -1.63
SSU72	YNL222W	KGD2	P19262	463 aa	Predicted RBP	4.84	□□□□□ -1.63
SSU72	YNL222W	RAD26	P40352	1085 aa		4.84	□□□□□ -1.63
SSU72	YNL222W	CIN1	P40987	1014 aa		4.84	□□□□□ -1.63
SSU72	YNL222W	AIM6	Q07716	390 aa		4.84	□□□□□ -1.63
SSU72	YNL222W	ICL2	Q12031	575 aa		4.84	□□□□□ -1.63
SSU72	YNL222W	LYS21	Q12122	440 aa	Known RBP	4.84	□□□□□ -1.63
SSU72	YNL222W	YOL114C	Q12322	202 aa		4.84	□□□□□ -1.63
SSU72	YNL222W	COQ3	P27680	312 aa		4.83	□□□□□ -1.64
SSU72	YNL222W	COP1	P53622	1201 aa	Known RBP	4.83	□□□□□ -1.64
SSU72	YNL222W	YNL058C	P53947	316 aa		4.83	□□□□□ -1.64
SSU72	YNL222W	CIR2	Q08822	631 aa		4.83	□□□□□ -1.64
SSU72	YNL222W	TMA7	Q3E764	64 aa	Known RBP	4.83	□□□□□ -1.64
SSU72	YNL222W	SIP1	P32578	815 aa		4.82	□□□□□ -1.64
SSU72	YNL222W	ERC1	P38767	581 aa		4.82	□□□□□ -1.64
SSU72	YNL222W	STT3	P39007	718 aa	Known RBP	4.82	□□□□□ -1.64
SSU72	YNL222W	ERV46	P39727	415 aa		4.82	□□□□□ -1.64
SSU72	YNL222W	SCW4	P53334	386 aa	Known RBP	4.82	□□□□□ -1.64
SSU72	YNL222W	HER1	Q12276	1246 aa		4.82	□□□□□ -1.64
SSU72	YNL222W	ILS1	P09436	1072 aa	Known RBP	4.81	□□□□□ -1.64
SSU72	YNL222W	FRD1	P32614	470 aa	Known RBP	4.81	□□□□□ -1.64
SSU72	YNL222W	RPF2	P36160	344 aa	Known RBP	4.81	□□□□□ -1.64
SSU72	YNL222W	VBA2	P38358	474 aa	Known RBP	4.81	□□□□□ -1.64
SSU72	YNL222W	FLO5	P38894	1075 aa		4.81	□□□□□ -1.64
SSU72	YNL222W	PCI8	P40512	444 aa		4.81	□□□□□ -1.64
SSU72	YNL222W	PDE1	P22434	369 aa		4.8	□□□□□ -1.64
SSU72	YNL222W	GSH1	P32477	678 aa		4.8	□□□□□ -1.64
SSU72	YNL222W	UBP7	P40453	1071 aa		4.8	□□□□□ -1.64
SSU72	YNL222W	NOP2	P40991	618 aa	Known RBP	4.8	□□□□□ -1.64
SSU72	YNL222W	NPA3	P47122	385 aa		4.8	□□□□□ -1.64
SSU72	YNL222W	YAT1	P80235	687 aa		4.8	□□□□□ -1.64
SSU72	YNL222W	YPL068C	Q02749	293 aa		4.8	□□□□□ -1.64
SSU72	YNL222W	YPL191C	Q08930	360 aa		4.8	□□□□□ -1.64
SSU72	YNL222W	PFA4	Q12006	378 aa		4.8	□□□□□ -1.64
SSU72	YNL222W	YPR089W	O13585	888 aa		4.79	□□□□□ -1.64
SSU72	YNL222W	GAL4	P04386	881 aa		4.79	□□□□□ -1.64
SSU72	YNL222W	ILV2	P07342	687 aa	Known RBP	4.79	□□□□□ -1.64
SSU72	YNL222W	YER190C-B	P0CX94	160 aa		4.79	□□□□□ -1.64
SSU72	YNL222W	YEL077W-A	P0CX95	160 aa		4.79	□□□□□ -1.64
SSU72	YNL222W	YGR296C-B	P0CX96	160 aa		4.79	□□□□□ -1.64
SSU72	YNL222W	YPL283W-B	P0CX97	160 aa		4.79	□□□□□ -1.64
SSU72	YNL222W	YPR204C-A	P0CX98	160 aa		4.79	□□□□□ -1.64
SSU72	YNL222W	SST2	P11972	698 aa	Known RBP	4.79	□□□□□ -1.64
SSU72	YNL222W	TOM20	P35180	183 aa		4.79	□□□□□ -1.64
SSU72	YNL222W	ASK1	P35734	292 aa		4.79	□□□□□ -1.64
SSU72	YNL222W	YMR124W	P39523	943 aa	Known RBP	4.79	□□□□□ -1.64
SSU72	YNL222W	CFD1	P40558	293 aa		4.79	□□□□□ -1.64
SSU72	YNL222W	TEP1	P53916	434 aa		4.79	□□□□□ -1.64
SSU72	YNL222W	MOT3	P54785	490 aa	Known RBP	4.79	□□□□□ -1.64
SSU72	YNL222W	SIR1	P21691	654 aa		4.78	□□□□□ -1.64
SSU72	YNL222W	GRX7	P38068	203 aa		4.78	□□□□□ -1.64
SSU72	YNL222W	SPC97	P38863	823 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 37.3 ms