RNA–Protein interactions for RNA: YGL003C

CDH1, Transcript of Activator of anaphase-promoting complex/cyclosome (APC/C), yeastyeast

Gene CDH1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDH1YGL003C CIR2Q08822 631 aa3.3□□□□□ -1.88
CDH1YGL003C CHC1P22137 1653 aaKnown RBP3.29□□□□□ -1.88
CDH1YGL003C CDC25P04821 1589 aa3.29□□□□□ -1.88
CDH1YGL003C RPS9AO13516 197 aaKnown RBP3.29□□□□□ -1.88
CDH1YGL003C ARD1P07347 238 aaPredicted RBP3.29□□□□□ -1.88
CDH1YGL003C BIK1P11709 440 aa3.29□□□□□ -1.88
CDH1YGL003C POL3P15436 1097 aa3.29□□□□□ -1.88
CDH1YGL003C PER1P25625 357 aa3.29□□□□□ -1.88
CDH1YGL003C ASF2P32448 525 aaPredicted RBP3.29□□□□□ -1.88
CDH1YGL003C KRE6P32486 720 aa3.29□□□□□ -1.88
CDH1YGL003C MEI5P32489 222 aa3.29□□□□□ -1.88
CDH1YGL003C SRP101P32916 621 aa3.29□□□□□ -1.88
CDH1YGL003C SEC66P33754 206 aa3.29□□□□□ -1.88
CDH1YGL003C LOT5P34234 306 aa3.29□□□□□ -1.88
CDH1YGL003C TAF5P38129 798 aa3.29□□□□□ -1.88
CDH1YGL003C YSW1P38280 609 aa3.29□□□□□ -1.88
CDH1YGL003C MTW1P39731 289 aa3.29□□□□□ -1.88
CDH1YGL003C BUD16P39988 312 aa3.29□□□□□ -1.88
CDH1YGL003C ZRG8P40021 1076 aa3.29□□□□□ -1.88
CDH1YGL003C YJL068CP40363 299 aa3.29□□□□□ -1.88
CDH1YGL003C YIL161WP40449 235 aaKnown RBP3.29□□□□□ -1.88
CDH1YGL003C RLP7P40693 322 aaKnown RBP3.29□□□□□ -1.88
CDH1YGL003C ALY2P47029 1046 aa3.29□□□□□ -1.88
CDH1YGL003C MAD3P47074 515 aa3.29□□□□□ -1.88
CDH1YGL003C YJR096WP47137 282 aa3.29□□□□□ -1.88
CDH1YGL003C YGR153WP48238 217 aa3.29□□□□□ -1.88
CDH1YGL003C PSP2P50109 593 aaKnown RBP3.29□□□□□ -1.88
CDH1YGL003C YGR012WP53206 393 aa3.29□□□□□ -1.88
CDH1YGL003C HDA1P53973 706 aa3.29□□□□□ -1.88
CDH1YGL003C YKR011CQ02209 353 aa3.29□□□□□ -1.88
CDH1YGL003C RBA50Q04418 439 aa3.29□□□□□ -1.88
CDH1YGL003C KRE28Q04431 385 aa3.29□□□□□ -1.88
CDH1YGL003C CRN1Q06440 651 aa3.29□□□□□ -1.88
CDH1YGL003C OMS1Q06668 471 aa3.29□□□□□ -1.88
CDH1YGL003C YCG1Q06680 1035 aa3.29□□□□□ -1.88
CDH1YGL003C NOP6Q07623 225 aaKnown RBP3.29□□□□□ -1.88
CDH1YGL003C RRP5Q05022 1729 aaKnown RBP3.29□□□□□ -1.88
CDH1YGL003C YOR093CQ12275 1648 aa3.28□□□□□ -1.88
CDH1YGL003C JIP3O13555 125 aa3.28□□□□□ -1.88
CDH1YGL003C SEM1O94742 89 aa3.28□□□□□ -1.88
CDH1YGL003C RPP2AP05319 106 aaKnown RBP3.28□□□□□ -1.88
CDH1YGL003C MSS18P08593 268 aa3.28□□□□□ -1.88
CDH1YGL003C STE11P23561 717 aa3.28□□□□□ -1.88
CDH1YGL003C YJU2P28320 278 aaPredicted RBP3.28□□□□□ -1.88
CDH1YGL003C CYS3P31373 394 aaKnown RBP3.28□□□□□ -1.88
CDH1YGL003C CBF2P32504 956 aa3.28□□□□□ -1.88
CDH1YGL003C TYE7P33122 291 aaPredicted RBP3.28□□□□□ -1.88
CDH1YGL003C TOS1P38288 455 aa3.28□□□□□ -1.88
CDH1YGL003C PEX32P38292 413 aa3.28□□□□□ -1.88
CDH1YGL003C PCM1P38628 557 aaKnown RBP3.28□□□□□ -1.88
CDH1YGL003C RPN10P38886 268 aaKnown RBP3.28□□□□□ -1.88
CDH1YGL003C STL1P39932 569 aa3.28□□□□□ -1.88
CDH1YGL003C TPA1P40032 644 aaKnown RBP3.28□□□□□ -1.88
CDH1YGL003C GCN20P43535 752 aaKnown RBP3.28□□□□□ -1.88
CDH1YGL003C LIA1P47120 325 aaKnown RBP3.28□□□□□ -1.88
CDH1YGL003C HXT16P47185 567 aa3.28□□□□□ -1.88
CDH1YGL003C ZIP2P53061 704 aa3.28□□□□□ -1.88
CDH1YGL003C CGR1P53188 120 aa3.28□□□□□ -1.88
CDH1YGL003C RPN14P53196 417 aa3.28□□□□□ -1.88
CDH1YGL003C YAP1802P53309 568 aa3.28□□□□□ -1.88
CDH1YGL003C YGR266WP53326 701 aa3.28□□□□□ -1.88
CDH1YGL003C INP2Q03824 705 aa3.28□□□□□ -1.88
CDH1YGL003C NHX1Q04121 633 aa3.28□□□□□ -1.88
CDH1YGL003C YDR338CQ05497 695 aa3.28□□□□□ -1.88
CDH1YGL003C BLS1Q06071 122 aa3.28□□□□□ -1.88
CDH1YGL003C ATG26Q06321 1198 aa3.28□□□□□ -1.88
CDH1YGL003C ATG33Q06485 197 aa3.28□□□□□ -1.88
CDH1YGL003C CMS1Q07897 291 aaKnown RBP3.28□□□□□ -1.88
CDH1YGL003C VHS3Q08438 674 aa3.28□□□□□ -1.88
CDH1YGL003C RTC1Q08281 1341 aa3.28□□□□□ -1.88
CDH1YGL003C LYS2P07702 1392 aa3.28□□□□□ -1.88
CDH1YGL003C DIF1O13577 133 aa3.27□□□□□ -1.89
CDH1YGL003C LAT1P12695 482 aaKnown RBP3.27□□□□□ -1.89
CDH1YGL003C MET8P15807 274 aa3.27□□□□□ -1.89
CDH1YGL003C AAC3P18238 307 aa3.27□□□□□ -1.89
CDH1YGL003C RRP43P25359 394 aaPredicted RBP3.27□□□□□ -1.89
CDH1YGL003C BUD14P27637 709 aa3.27□□□□□ -1.89
CDH1YGL003C DAL3P32459 195 aa3.27□□□□□ -1.89
CDH1YGL003C PRP19P32523 503 aaKnown RBP3.27□□□□□ -1.89
CDH1YGL003C KAR9P32526 644 aa3.27□□□□□ -1.89
CDH1YGL003C SMI1P32566 505 aa3.27□□□□□ -1.89
CDH1YGL003C SRB4P32569 687 aa3.27□□□□□ -1.89
CDH1YGL003C PUB1P32588 453 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
CDH1YGL003C MTG2P38860 518 aa3.27□□□□□ -1.89
CDH1YGL003C UTP9P38882 575 aaKnown RBP3.27□□□□□ -1.89
CDH1YGL003C SET5P38890 526 aaKnown RBP3.27□□□□□ -1.89
CDH1YGL003C OAF1P39720 1047 aaPredicted RBP3.27□□□□□ -1.89
CDH1YGL003C GDI1P39958 451 aaKnown RBP3.27□□□□□ -1.89
CDH1YGL003C LSM5P40089 93 aaKnown RBP3.27□□□□□ -1.89
CDH1YGL003C PKP1P40530 394 aa3.27□□□□□ -1.89
CDH1YGL003C MND2P40577 368 aa3.27□□□□□ -1.89
CDH1YGL003C CTK3P46963 296 aaPredicted RBP3.27□□□□□ -1.89
CDH1YGL003C NIT2P47016 307 aa3.27□□□□□ -1.89
CDH1YGL003C CTH1P47976 325 aa3.27□□□□□ -1.89
CDH1YGL003C NCS6P53088 359 aa3.27□□□□□ -1.89
CDH1YGL003C YML119WQ03208 357 aa3.27□□□□□ -1.89
CDH1YGL003C FCP1Q03254 732 aa3.27□□□□□ -1.89
CDH1YGL003C RRP17Q04031 235 aaPredicted RBP3.27□□□□□ -1.89
CDH1YGL003C LRS4Q04087 347 aaKnown RBP3.27□□□□□ -1.89
CDH1YGL003C GUD1Q07729 489 aa3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms